RNA–Protein interactions for RNA: ENST00000617087.1

PVT1-225, Transcript of Pvt1 oncogene, human

Gene PVT1, Length 130 nt, Biotype misc RNA, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PVT1-225	ENST00000617087	IKZF2	Q9UKS7	526 aa		4.17	□□□□□ -1.74
PVT1-225	ENST00000617087	CSDC2	Q9Y534	153 aa	Known RBP	4.17	□□□□□ -1.74
PVT1-225	ENST00000617087	FLVCR1	Q9Y5Y0	555 aa		4.17	□□□□□ -1.74
PVT1-225	ENST00000617087	PLEKHH1	Q9ULM0	1364 aa		4.16	□□□□□ -1.74
PVT1-225	ENST00000617087	IGHV1OR15-1	A0A075B7D0	117 aa		4.16	□□□□□ -1.74
PVT1-225	ENST00000617087	WWP2	O00308	870 aa		4.16	□□□□□ -1.74
PVT1-225	ENST00000617087	DNALI1	O14645	258 aa	Predicted RBP	4.16	□□□□□ -1.74
PVT1-225	ENST00000617087	CRLF1	O75462	422 aa		4.16	□□□□□ -1.74
PVT1-225	ENST00000617087	MCF2	P10911	925 aa		4.16	□□□□□ -1.74
PVT1-225	ENST00000617087	GAL	P22466	123 aa		4.16	□□□□□ -1.74
PVT1-225	ENST00000617087	ANXA13	P27216	316 aa		4.16	□□□□□ -1.74
PVT1-225	ENST00000617087	RDX	P35241	583 aa	Known RBP	4.16	□□□□□ -1.74
PVT1-225	ENST00000617087	PKNOX1	P55347	436 aa		4.16	□□□□□ -1.74
PVT1-225	ENST00000617087	BID	P55957	195 aa		4.16	□□□□□ -1.74
PVT1-225	ENST00000617087	PLP1	P60201	277 aa		4.16	□□□□□ -1.74
PVT1-225	ENST00000617087	RPS8	P62241	208 aa	Known RBP	4.16	□□□□□ -1.74
PVT1-225	ENST00000617087	GSG1	Q2KHT4	349 aa		4.16	□□□□□ -1.74
PVT1-225	ENST00000617087	CARD17	Q5XLA6	110 aa		4.16	□□□□□ -1.74
PVT1-225	ENST00000617087	TMEM107	Q6UX40	140 aa		4.16	□□□□□ -1.74
PVT1-225	ENST00000617087	FRA10AC1	Q70Z53	315 aa		4.16	□□□□□ -1.74
PVT1-225	ENST00000617087	MARCH9	Q86YJ5	346 aa		4.16	□□□□□ -1.74
PVT1-225	ENST00000617087	HPS6	Q86YV9	775 aa		4.16	□□□□□ -1.74
PVT1-225	ENST00000617087	FAM222B	Q8WU58	562 aa		4.16	□□□□□ -1.74
PVT1-225	ENST00000617087	DNAJA4	Q8WW22	397 aa	Predicted RBP	4.16	□□□□□ -1.74
PVT1-225	ENST00000617087	FGGY	Q96C11	551 aa		4.16	□□□□□ -1.74
PVT1-225	ENST00000617087	TM4SF19	Q96DZ7	209 aa		4.16	□□□□□ -1.74
PVT1-225	ENST00000617087	PGLYRP4	Q96LB8	373 aa		4.16	□□□□□ -1.74
PVT1-225	ENST00000617087	ZNF641	Q96N77	438 aa	Predicted RBP	4.16	□□□□□ -1.74
PVT1-225	ENST00000617087	PANX2	Q96RD6	677 aa		4.16	□□□□□ -1.74
PVT1-225	ENST00000617087	KIR2DL4	Q99706	377 aa		4.16	□□□□□ -1.74
PVT1-225	ENST00000617087	GAL3ST1	Q99999	423 aa		4.16	□□□□□ -1.74
PVT1-225	ENST00000617087	MAPKAP1	Q9BPZ7	522 aa		4.16	□□□□□ -1.74
PVT1-225	ENST00000617087	KRTAP2-2	Q9BYT5	123 aa		4.16	□□□□□ -1.74
PVT1-225	ENST00000617087	UBXN6	Q9BZV1	441 aa		4.16	□□□□□ -1.74
PVT1-225	ENST00000617087	PPA2	Q9H2U2	334 aa		4.16	□□□□□ -1.74
PVT1-225	ENST00000617087	RBKS	Q9H477	322 aa		4.16	□□□□□ -1.74
PVT1-225	ENST00000617087	NARFL	Q9H6Q4	476 aa		4.16	□□□□□ -1.74
PVT1-225	ENST00000617087	THUMPD1	Q9NXG2	353 aa	Known RBP	4.16	□□□□□ -1.74
PVT1-225	ENST00000617087	APOBEC3B	Q9UH17	382 aa	Known RBP	4.16	□□□□□ -1.74
PVT1-225	ENST00000617087	THOC2	Q8NI27	1593 aa	Known RBP	4.15	□□□□□ -1.74
PVT1-225	ENST00000617087	LAMC3	Q9Y6N6	1575 aa		4.15	□□□□□ -1.74
PVT1-225	ENST00000617087	CACNG3	O60359	315 aa		4.15	□□□□□ -1.75
PVT1-225	ENST00000617087	TMEM50A	O95807	157 aa		4.15	□□□□□ -1.75
PVT1-225	ENST00000617087	OR8U8	P0C7N1	319 aa		4.15	□□□□□ -1.75
PVT1-225	ENST00000617087	TROVE2	P10155	538 aa	Known RBP eCLIP	4.15	□□□□□ -1.75
PVT1-225	ENST00000617087	KITLG	P21583	273 aa		4.15	□□□□□ -1.75
PVT1-225	ENST00000617087	UGT1A3	P35503	534 aa		4.15	□□□□□ -1.75
PVT1-225	ENST00000617087	MEOX2	P50222	304 aa		4.15	□□□□□ -1.75
PVT1-225	ENST00000617087	PPIL2	Q13356	520 aa		4.15	□□□□□ -1.75
PVT1-225	ENST00000617087	ARL6IP1	Q15041	203 aa		4.15	□□□□□ -1.75
PVT1-225	ENST00000617087	DGUOK	Q16854	277 aa		4.15	□□□□□ -1.75
PVT1-225	ENST00000617087	NSUN5P1	Q3KNT7	163 aa		4.15	□□□□□ -1.75
PVT1-225	ENST00000617087	PAGE2B	Q5JRK9	111 aa		4.15	□□□□□ -1.75
PVT1-225	ENST00000617087	KLF17	Q5JT82	389 aa	Predicted RBP	4.15	□□□□□ -1.75
PVT1-225	ENST00000617087	LRRC66	Q68CR7	880 aa		4.15	□□□□□ -1.75
PVT1-225	ENST00000617087	OR52E8	Q6IFG1	317 aa		4.15	□□□□□ -1.75
PVT1-225	ENST00000617087	WDR74	Q6RFH5	385 aa	Predicted RBP	4.15	□□□□□ -1.75
PVT1-225	ENST00000617087	PGAP1	Q75T13	922 aa		4.15	□□□□□ -1.75
PVT1-225	ENST00000617087	GDPD3	Q7L5L3	318 aa		4.15	□□□□□ -1.75
PVT1-225	ENST00000617087	BHLHA9	Q7RTU4	235 aa		4.15	□□□□□ -1.75
PVT1-225	ENST00000617087	ZNF485	Q8NCK3	441 aa		4.15	□□□□□ -1.75
PVT1-225	ENST00000617087	TYMSOS	Q8TAI1	123 aa		4.15	□□□□□ -1.75
PVT1-225	ENST00000617087	TBRG4	Q969Z0	631 aa	Known RBP eCLIP	4.15	□□□□□ -1.75
PVT1-225	ENST00000617087	SLC25A38	Q96DW6	304 aa		4.15	□□□□□ -1.75
PVT1-225	ENST00000617087	NAF1	Q96HR8	494 aa	Known RBP	4.15	□□□□□ -1.75
PVT1-225	ENST00000617087	IFT74	Q96LB3	600 aa		4.15	□□□□□ -1.75
PVT1-225	ENST00000617087	FOXN4	Q96NZ1	517 aa		4.15	□□□□□ -1.75
PVT1-225	ENST00000617087	FAM192A	Q9GZU8	254 aa		4.15	□□□□□ -1.75
PVT1-225	ENST00000617087		Q9H3A6	140 aa		4.15	□□□□□ -1.75
PVT1-225	ENST00000617087	STAP1	Q9ULZ2	295 aa		4.15	□□□□□ -1.75
PVT1-225	ENST00000617087	TMCO1	Q9UM00	188 aa		4.15	□□□□□ -1.75
PVT1-225	ENST00000617087	CAB39	Q9Y376	341 aa	Predicted RBP	4.15	□□□□□ -1.75
PVT1-225	ENST00000617087	RPL36	Q9Y3U8	105 aa	Known RBP	4.15	□□□□□ -1.75
PVT1-225	ENST00000617087	WIZ	O95785	1651 aa		4.15	□□□□□ -1.75
PVT1-225	ENST00000617087	LRRK1	Q38SD2	2015 aa		4.14	□□□□□ -1.75
PVT1-225	ENST00000617087		A0A075B6Q4	140 aa		4.14	□□□□□ -1.75
PVT1-225	ENST00000617087	IGHV7-81	A0A0B4J1V7	117 aa		4.14	□□□□□ -1.75
PVT1-225	ENST00000617087		A0A0G2JRQ6	117 aa		4.14	□□□□□ -1.75
PVT1-225	ENST00000617087	CCDC182	A6NF36	153 aa		4.14	□□□□□ -1.75
PVT1-225	ENST00000617087		K7N7A8	449 aa		4.14	□□□□□ -1.75
PVT1-225	ENST00000617087	ABCD4	O14678	606 aa		4.14	□□□□□ -1.75
PVT1-225	ENST00000617087	BCL2L11	O43521	198 aa		4.14	□□□□□ -1.75
PVT1-225	ENST00000617087	RNF13	O43567	381 aa		4.14	□□□□□ -1.75
PVT1-225	ENST00000617087	UGT1A9	O60656	530 aa		4.14	□□□□□ -1.75
PVT1-225	ENST00000617087	LYPLA1	O75608	230 aa	Predicted RBP	4.14	□□□□□ -1.75
PVT1-225	ENST00000617087	STAMBP	O95630	424 aa		4.14	□□□□□ -1.75
PVT1-225	ENST00000617087	OXSR1	O95747	527 aa	Predicted RBP	4.14	□□□□□ -1.75
PVT1-225	ENST00000617087	CGA	P01215	116 aa		4.14	□□□□□ -1.75
PVT1-225	ENST00000617087	MMP1	P03956	469 aa		4.14	□□□□□ -1.75
PVT1-225	ENST00000617087	THY1	P04216	161 aa		4.14	□□□□□ -1.75
PVT1-225	ENST00000617087	SEMG1	P04279	462 aa		4.14	□□□□□ -1.75
PVT1-225	ENST00000617087	IL12A	P29459	219 aa		4.14	□□□□□ -1.75
PVT1-225	ENST00000617087	AQP1	P29972	269 aa		4.14	□□□□□ -1.75
PVT1-225	ENST00000617087	HTR1F	P30939	366 aa		4.14	□□□□□ -1.75
PVT1-225	ENST00000617087	RFC4	P35249	363 aa		4.14	□□□□□ -1.75
PVT1-225	ENST00000617087	BCL2L1	Q07817	233 aa		4.14	□□□□□ -1.75
PVT1-225	ENST00000617087	OR5I1	Q13606	314 aa		4.14	□□□□□ -1.75
PVT1-225	ENST00000617087	PPP1R7	Q15435	360 aa		4.14	□□□□□ -1.75
PVT1-225	ENST00000617087	XKR7	Q5GH72	579 aa		4.14	□□□□□ -1.75
PVT1-225	ENST00000617087	UTF1	Q5T230	341 aa		4.14	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms