RNA–Protein interactions for RNA: ENST00000615606.4

CLTCL1-208, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,994 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-208ENST00000615606 ZNF584Q8IVC4 421 aa8.72□□□□□ -1.01
CLTCL1-208ENST00000615606 OR6T1Q8NGN1 323 aa8.72□□□□□ -1.01
CLTCL1-208ENST00000615606 GOT1L1Q8NHS2 421 aaPredicted RBP8.72□□□□□ -1.01
CLTCL1-208ENST00000615606 C16orf52Q8NHV5 167 aa8.72□□□□□ -1.01
CLTCL1-208ENST00000615606 ZNF417Q8TAU3 575 aa8.72□□□□□ -1.01
CLTCL1-208ENST00000615606 LGALS12Q96DT0 336 aa8.72□□□□□ -1.01
CLTCL1-208ENST00000615606 MNTQ99583 582 aa8.72□□□□□ -1.01
CLTCL1-208ENST00000615606 MENTQ9BUN1 341 aa8.72□□□□□ -1.01
CLTCL1-208ENST00000615606 ZNF442Q9H7R0 627 aa8.72□□□□□ -1.01
CLTCL1-208ENST00000615606 PCDHGA10Q9Y5H3 936 aa8.72□□□□□ -1.01
CLTCL1-208ENST00000615606 SHROOM3Q8TF72 1996 aa8.72□□□□□ -1.01
CLTCL1-208ENST00000615606 A0A1W2PQF6 199 aa8.72□□□□□ -1.01
CLTCL1-208ENST00000615606 C5orf51A6NDU8 294 aa8.72□□□□□ -1.01
CLTCL1-208ENST00000615606 KCNK2O95069 426 aa8.72□□□□□ -1.01
CLTCL1-208ENST00000615606 RBM34P42696 430 aaKnown RBP8.72□□□□□ -1.01
CLTCL1-208ENST00000615606 PNLIPRP2P54317 469 aa8.72□□□□□ -1.01
CLTCL1-208ENST00000615606 CXCR4P61073 352 aa8.72□□□□□ -1.01
CLTCL1-208ENST00000615606 SPRED3Q2MJR0 410 aa8.72□□□□□ -1.01
CLTCL1-208ENST00000615606 COL28A1Q2UY09 1125 aa8.72□□□□□ -1.01
CLTCL1-208ENST00000615606 PRAMEF17Q5VTA0 474 aa8.72□□□□□ -1.01
CLTCL1-208ENST00000615606 XKRXQ6PP77 449 aa8.72□□□□□ -1.01
CLTCL1-208ENST00000615606 DLEU7Q6UYE1 221 aa8.72□□□□□ -1.01
CLTCL1-208ENST00000615606 KCTD20Q7Z5Y7 419 aa8.72□□□□□ -1.01
CLTCL1-208ENST00000615606 PLCZ1Q86YW0 608 aa8.72□□□□□ -1.01
CLTCL1-208ENST00000615606 ANKRD53Q8N9V6 530 aa8.72□□□□□ -1.01
CLTCL1-208ENST00000615606 TNFRSF13CQ96RJ3 184 aa8.72□□□□□ -1.01
CLTCL1-208ENST00000615606 SMURF1Q9HCE7 757 aa8.72□□□□□ -1.01
CLTCL1-208ENST00000615606 ZNF701Q9NV72 531 aaPredicted RBP8.72□□□□□ -1.01
CLTCL1-208ENST00000615606 RLIMQ9NVW2 624 aa8.72□□□□□ -1.01
CLTCL1-208ENST00000615606 NEU3Q9UQ49 428 aa8.72□□□□□ -1.01
CLTCL1-208ENST00000615606 A0A0A6YYD5 115 aa8.71□□□□□ -1.01
CLTCL1-208ENST00000615606 HMGN4O00479 90 aa8.71□□□□□ -1.01
CLTCL1-208ENST00000615606 RBBP9O75884 186 aa8.71□□□□□ -1.01
CLTCL1-208ENST00000615606 ETHE1O95571 254 aa8.71□□□□□ -1.01
CLTCL1-208ENST00000615606 SBK3P0C264 359 aa8.71□□□□□ -1.01
CLTCL1-208ENST00000615606 FASLGP48023 281 aa8.71□□□□□ -1.01
CLTCL1-208ENST00000615606 SIRPAP78324 504 aa8.71□□□□□ -1.01
CLTCL1-208ENST00000615606 DPY19L2P2Q6ZN68 376 aa8.71□□□□□ -1.01
CLTCL1-208ENST00000615606 GDPGP1Q6ZNW5 385 aa8.71□□□□□ -1.01
CLTCL1-208ENST00000615606 ZNF547Q8IVP9 402 aa8.71□□□□□ -1.01
CLTCL1-208ENST00000615606 NAXDQ8IW45 347 aa8.71□□□□□ -1.01
CLTCL1-208ENST00000615606 OR1N1Q8NGS0 311 aa8.71□□□□□ -1.01
CLTCL1-208ENST00000615606 LAT2Q9GZY6 243 aa8.71□□□□□ -1.01
CLTCL1-208ENST00000615606 S1PR5Q9H228 398 aa8.71□□□□□ -1.01
CLTCL1-208ENST00000615606 CALHM2Q9HA72 323 aa8.71□□□□□ -1.01
CLTCL1-208ENST00000615606 KCNIP1Q9NZI2 227 aa8.71□□□□□ -1.01
CLTCL1-208ENST00000615606 AASSQ9UDR5 926 aa8.71□□□□□ -1.01
CLTCL1-208ENST00000615606 FRG2CA6NGY1 282 aa8.71□□□□□ -1.01
CLTCL1-208ENST00000615606 KDM4EB2RXH2 506 aaPredicted RBP8.71□□□□□ -1.01
CLTCL1-208ENST00000615606 OR7A10O76100 309 aa8.71□□□□□ -1.01
CLTCL1-208ENST00000615606 GASTP01350 101 aa8.71□□□□□ -1.01
CLTCL1-208ENST00000615606 LCKP06239 509 aa8.71□□□□□ -1.01
CLTCL1-208ENST00000615606 CHMP24386 653 aa8.71□□□□□ -1.01
CLTCL1-208ENST00000615606 FPR3P25089 353 aa8.71□□□□□ -1.01
CLTCL1-208ENST00000615606 EIF4EBP2Q13542 120 aaPredicted RBP8.71□□□□□ -1.01
CLTCL1-208ENST00000615606 CNN3Q15417 329 aaKnown RBP8.71□□□□□ -1.01
CLTCL1-208ENST00000615606 SLC36A2Q495M3 483 aa8.71□□□□□ -1.01
CLTCL1-208ENST00000615606 PLK5Q496M5 336 aa8.71□□□□□ -1.01
CLTCL1-208ENST00000615606 SARAFQ96BY9 339 aa8.71□□□□□ -1.01
CLTCL1-208ENST00000615606 EGLN3Q9H6Z9 239 aa8.71□□□□□ -1.01
CLTCL1-208ENST00000615606 ZNF587BE7ETH6 402 aa8.71□□□□□ -1.02
CLTCL1-208ENST00000615606 J3QRK9 145 aa8.71□□□□□ -1.02
CLTCL1-208ENST00000615606 L7N2F9 121 aa8.71□□□□□ -1.02
CLTCL1-208ENST00000615606 PRRG2O14669 202 aa8.71□□□□□ -1.02
CLTCL1-208ENST00000615606 LGI1O95970 557 aa8.71□□□□□ -1.02
CLTCL1-208ENST00000615606 GYPBP06028 91 aa8.71□□□□□ -1.02
CLTCL1-208ENST00000615606 ELAVL4P26378 380 aaKnown RBP8.71□□□□□ -1.02
CLTCL1-208ENST00000615606 VAMP2P63027 116 aa8.71□□□□□ -1.02
CLTCL1-208ENST00000615606 ZNF45Q02386 682 aa8.71□□□□□ -1.02
CLTCL1-208ENST00000615606 MLC1Q15049 377 aa8.71□□□□□ -1.02
CLTCL1-208ENST00000615606 MOGQ16653 247 aa8.71□□□□□ -1.02
CLTCL1-208ENST00000615606 ARSJQ5FYB0 599 aaPredicted RBP8.71□□□□□ -1.02
CLTCL1-208ENST00000615606 AWAT2Q6E213 333 aa8.71□□□□□ -1.02
CLTCL1-208ENST00000615606 DGLUCYQ7Z3D6 616 aa8.71□□□□□ -1.02
CLTCL1-208ENST00000615606 GRPEL2Q8TAA5 225 aa8.71□□□□□ -1.02
CLTCL1-208ENST00000615606 SUN5Q8TC36 379 aa8.71□□□□□ -1.02
CLTCL1-208ENST00000615606 TFAP2CQ92754 450 aa8.71□□□□□ -1.02
CLTCL1-208ENST00000615606 SPNS1Q9H2V7 528 aa8.71□□□□□ -1.02
CLTCL1-208ENST00000615606 ERVMER34-1Q9H9K5 563 aa8.71□□□□□ -1.02
CLTCL1-208ENST00000615606 ZNF224Q9NZL3 707 aa8.71□□□□□ -1.02
CLTCL1-208ENST00000615606 RABL2AQ9UBK7 228 aaPredicted RBP8.71□□□□□ -1.02
CLTCL1-208ENST00000615606 HHLA2Q9UM44 414 aa8.71□□□□□ -1.02
CLTCL1-208ENST00000615606 RABL2BQ9UNT1 228 aa8.71□□□□□ -1.02
CLTCL1-208ENST00000615606 CCDC163A0A0D9SF12 145 aa8.71□□□□□ -1.02
CLTCL1-208ENST00000615606 VAMP5O95183 116 aa8.71□□□□□ -1.02
CLTCL1-208ENST00000615606 ACP2P11117 423 aa8.71□□□□□ -1.02
CLTCL1-208ENST00000615606 ANXA3P12429 323 aa8.71□□□□□ -1.02
CLTCL1-208ENST00000615606 RAB3AP20336 220 aa8.71□□□□□ -1.02
CLTCL1-208ENST00000615606 CFL1P23528 166 aaKnown RBP8.71□□□□□ -1.02
CLTCL1-208ENST00000615606 SOX3P41225 446 aa8.71□□□□□ -1.02
CLTCL1-208ENST00000615606 SLC1A3P43003 542 aa8.71□□□□□ -1.02
CLTCL1-208ENST00000615606 ART1P52961 327 aa8.71□□□□□ -1.02
CLTCL1-208ENST00000615606 BIDP55957 195 aa8.71□□□□□ -1.02
CLTCL1-208ENST00000615606 CAMK2DQ13557 499 aa8.71□□□□□ -1.02
CLTCL1-208ENST00000615606 H1FNTQ75WM6 255 aaPredicted RBP8.71□□□□□ -1.02
CLTCL1-208ENST00000615606 SLC35D2Q76EJ3 337 aa8.71□□□□□ -1.02
CLTCL1-208ENST00000615606 HMGCLL1Q8TB92 370 aa8.71□□□□□ -1.02
CLTCL1-208ENST00000615606 SMOC1Q9H4F8 434 aa8.71□□□□□ -1.02
CLTCL1-208ENST00000615606 UCKL1Q9NWZ5 548 aa8.71□□□□□ -1.02
CLTCL1-208ENST00000615606 CHRNA9Q9UGM1 479 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms