RNA–Protein interactions for RNA: ENST00000613856.4

SLIRP-212, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SLIRP, Length 420 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-212ENST00000613856 CMPK2Q5EBM0 449 aa10.34□□□□□ -0.75
SLIRP-212ENST00000613856 SPINK14Q6IE38 97 aa10.34□□□□□ -0.75
SLIRP-212ENST00000613856 ARSKQ6UWY0 536 aa10.34□□□□□ -0.75
SLIRP-212ENST00000613856 CISD2Q8N5K1 135 aaKnown RBP10.34□□□□□ -0.75
SLIRP-212ENST00000613856 OR2M7Q8NG81 312 aa10.34□□□□□ -0.75
SLIRP-212ENST00000613856 RNF217Q8TC41 542 aa10.34□□□□□ -0.75
SLIRP-212ENST00000613856 GNPDA2Q8TDQ7 276 aa10.34□□□□□ -0.75
SLIRP-212ENST00000613856 C5orf34Q96MH7 638 aa10.34□□□□□ -0.75
SLIRP-212ENST00000613856 NIPSNAP1Q9BPW8 284 aa10.34□□□□□ -0.75
SLIRP-212ENST00000613856 ADI1Q9BV57 179 aa10.34□□□□□ -0.75
SLIRP-212ENST00000613856 UCK2Q9BZX2 261 aa10.34□□□□□ -0.75
SLIRP-212ENST00000613856 MEPEQ9NQ76 525 aaPredicted RBP10.34□□□□□ -0.75
SLIRP-212ENST00000613856 PLA2G3Q9NZ20 509 aa10.34□□□□□ -0.75
SLIRP-212ENST00000613856 SLC5A6Q9Y289 635 aa10.34□□□□□ -0.75
SLIRP-212ENST00000613856 C15orf41Q9Y2V0 281 aa10.34□□□□□ -0.75
SLIRP-212ENST00000613856 MRPS18CQ9Y3D5 142 aaKnown RBP10.34□□□□□ -0.75
SLIRP-212ENST00000613856 FREM3P0C091 2139 aa10.34□□□□□ -0.75
SLIRP-212ENST00000613856 ZGRF1Q86YA3 2104 aa10.33□□□□□ -0.76
SLIRP-212ENST00000613856 TMED7-TICAM2A0A0A6YYA0 188 aa10.33□□□□□ -0.76
SLIRP-212ENST00000613856 E9PQ18 207 aa10.33□□□□□ -0.76
SLIRP-212ENST00000613856 G3V3Y1 287 aa10.33□□□□□ -0.76
SLIRP-212ENST00000613856 GMFGO60234 142 aa10.33□□□□□ -0.76
SLIRP-212ENST00000613856 MITFO75030 526 aaPredicted RBP10.33□□□□□ -0.76
SLIRP-212ENST00000613856 NPIPB7O75200 414 aa10.33□□□□□ -0.76
SLIRP-212ENST00000613856 SNAP29O95721 258 aa10.33□□□□□ -0.76
SLIRP-212ENST00000613856 F10P00742 488 aa10.33□□□□□ -0.76
SLIRP-212ENST00000613856 SP1P08047 785 aa10.33□□□□□ -0.76
SLIRP-212ENST00000613856 ACADSP16219 412 aa10.33□□□□□ -0.76
SLIRP-212ENST00000613856 ZNF17P17021 662 aa10.33□□□□□ -0.76
SLIRP-212ENST00000613856 CXCR1P25024 350 aa10.33□□□□□ -0.76
SLIRP-212ENST00000613856 ELK4P28324 431 aa10.33□□□□□ -0.76
SLIRP-212ENST00000613856 SRD5A2P31213 254 aa10.33□□□□□ -0.76
SLIRP-212ENST00000613856 TNFSF10P50591 281 aa10.33□□□□□ -0.76
SLIRP-212ENST00000613856 ESRRGP62508 458 aa10.33□□□□□ -0.76
SLIRP-212ENST00000613856 LSM11P83369 360 aaKnown RBP eCLIP10.33□□□□□ -0.76
SLIRP-212ENST00000613856 ALDH6A1Q02252 535 aaKnown RBP10.33□□□□□ -0.76
SLIRP-212ENST00000613856 MERTKQ12866 999 aa10.33□□□□□ -0.76
SLIRP-212ENST00000613856 TMEM44Q2T9K0 475 aa10.33□□□□□ -0.76
SLIRP-212ENST00000613856 GLYR1Q49A26 553 aaPredicted RBP10.33□□□□□ -0.76
SLIRP-212ENST00000613856 WLSQ5T9L3 541 aa10.33□□□□□ -0.76
SLIRP-212ENST00000613856 SLC25A25Q6KCM7 469 aa10.33□□□□□ -0.76
SLIRP-212ENST00000613856 KLHL17Q6TDP4 642 aa10.33□□□□□ -0.76
SLIRP-212ENST00000613856 IGFL3Q6UXB1 125 aa10.33□□□□□ -0.76
SLIRP-212ENST00000613856 TMPRSS11FQ6ZWK6 438 aa10.33□□□□□ -0.76
SLIRP-212ENST00000613856 GTPBP8Q8N3Z3 284 aaPredicted RBP10.33□□□□□ -0.76
SLIRP-212ENST00000613856 DHRSXQ8N5I4 330 aa10.33□□□□□ -0.76
SLIRP-212ENST00000613856 CLDN22Q8N7P3 220 aa10.33□□□□□ -0.76
SLIRP-212ENST00000613856 TMEM178AQ8NBL3 297 aa10.33□□□□□ -0.76
SLIRP-212ENST00000613856 PFN4Q8NHR9 129 aa10.33□□□□□ -0.76
SLIRP-212ENST00000613856 POC1BQ8TC44 478 aa10.33□□□□□ -0.76
SLIRP-212ENST00000613856 STK35Q8TDR2 534 aa10.33□□□□□ -0.76
SLIRP-212ENST00000613856 TM9SF4Q92544 642 aa10.33□□□□□ -0.76
SLIRP-212ENST00000613856 TFAP2CQ92754 450 aa10.33□□□□□ -0.76
SLIRP-212ENST00000613856 GTPBP3Q969Y2 492 aaKnown RBP10.33□□□□□ -0.76
SLIRP-212ENST00000613856 FAM46AQ96IP4 442 aaKnown RBP10.33□□□□□ -0.76
SLIRP-212ENST00000613856 MBOAT4Q96T53 435 aa10.33□□□□□ -0.76
SLIRP-212ENST00000613856 OR2B2Q9GZK3 357 aa10.33□□□□□ -0.76
SLIRP-212ENST00000613856 UBQLN3Q9H347 655 aa10.33□□□□□ -0.76
SLIRP-212ENST00000613856 TOR3AQ9H497 397 aa10.33□□□□□ -0.76
SLIRP-212ENST00000613856 Q9H521 79 aa10.33□□□□□ -0.76
SLIRP-212ENST00000613856 ZFP64Q9NPA5 681 aa10.33□□□□□ -0.76
SLIRP-212ENST00000613856 TUBA8Q9NY65 449 aaPredicted RBP10.33□□□□□ -0.76
SLIRP-212ENST00000613856 TMED7Q9Y3B3 224 aa10.33□□□□□ -0.76
SLIRP-212ENST00000613856 PCDHGB7Q9Y5F8 929 aa10.33□□□□□ -0.76
SLIRP-212ENST00000613856 AP4B1Q9Y6B7 739 aa10.33□□□□□ -0.76
SLIRP-212ENST00000613856 ITPR3Q14573 2671 aa10.33□□□□□ -0.76
SLIRP-212ENST00000613856 HIVEP1P15822 2718 aa10.32□□□□□ -0.76
SLIRP-212ENST00000613856 TMEM72A0PK05 275 aa10.32□□□□□ -0.76
SLIRP-212ENST00000613856 SLC16A6O15403 523 aa10.32□□□□□ -0.76
SLIRP-212ENST00000613856 ZNF208O43345 1280 aa10.32□□□□□ -0.76
SLIRP-212ENST00000613856 SUSD5O60279 629 aa10.32□□□□□ -0.76
SLIRP-212ENST00000613856 IFI30P13284 250 aa10.32□□□□□ -0.76
SLIRP-212ENST00000613856 OSMP13725 252 aa10.32□□□□□ -0.76
SLIRP-212ENST00000613856 FKBP2P26885 142 aaKnown RBP10.32□□□□□ -0.76
SLIRP-212ENST00000613856 DPP4P27487 766 aa10.32□□□□□ -0.76
SLIRP-212ENST00000613856 CAPGP40121 348 aa10.32□□□□□ -0.76
SLIRP-212ENST00000613856 ADARB1P78563 741 aaKnown RBP10.32□□□□□ -0.76
SLIRP-212ENST00000613856 EGR4Q05215 589 aa10.32□□□□□ -0.76
SLIRP-212ENST00000613856 CRYZQ08257 329 aaKnown RBP10.32□□□□□ -0.76
SLIRP-212ENST00000613856 FOXD4Q12950 439 aaPredicted RBP10.32□□□□□ -0.76
SLIRP-212ENST00000613856 NPRL3Q12980 569 aa10.32□□□□□ -0.76
SLIRP-212ENST00000613856 SELENBP1Q13228 472 aa10.32□□□□□ -0.76
SLIRP-212ENST00000613856 HYAL4Q2M3T9 481 aa10.32□□□□□ -0.76
SLIRP-212ENST00000613856 SLC36A3Q495N2 470 aa10.32□□□□□ -0.76
SLIRP-212ENST00000613856 TTC23Q5W5X9 447 aa10.32□□□□□ -0.76
SLIRP-212ENST00000613856 RASSF6Q6ZTQ3 369 aa10.32□□□□□ -0.76
SLIRP-212ENST00000613856 GALNT5Q7Z7M9 940 aa10.32□□□□□ -0.76
SLIRP-212ENST00000613856 ADGRG3Q86Y34 549 aa10.32□□□□□ -0.76
SLIRP-212ENST00000613856 SULF2Q8IWU5 870 aa10.32□□□□□ -0.76
SLIRP-212ENST00000613856 CDK20Q8IZL9 346 aa10.32□□□□□ -0.76
SLIRP-212ENST00000613856 OR6S1Q8NH40 331 aa10.32□□□□□ -0.76
SLIRP-212ENST00000613856 SLC25A43Q8WUT9 341 aaPredicted RBP10.32□□□□□ -0.76
SLIRP-212ENST00000613856 LIPHQ8WWY8 451 aa10.32□□□□□ -0.76
SLIRP-212ENST00000613856 PNPLA2Q96AD5 504 aa10.32□□□□□ -0.76
SLIRP-212ENST00000613856 BPIFA2Q96DR5 249 aa10.32□□□□□ -0.76
SLIRP-212ENST00000613856 SGTBQ96EQ0 304 aa10.32□□□□□ -0.76
SLIRP-212ENST00000613856 PITX2Q99697 317 aa10.32□□□□□ -0.76
SLIRP-212ENST00000613856 GPA33Q99795 319 aa10.32□□□□□ -0.76
SLIRP-212ENST00000613856 ANKRD60Q9BZ19 345 aa10.32□□□□□ -0.76
SLIRP-212ENST00000613856 GRIP2Q9C0E4 1043 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms