RNA–Protein interactions for RNA: ENST00000613788.1

CD48-203, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,500 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-203ENST00000613788 CHMP1BQ7LBR1 199 aa13.22□□□□□ -0.29
CD48-203ENST00000613788 GGNQ86UU5 652 aa13.22□□□□□ -0.29
CD48-203ENST00000613788 ZDHHC13Q8IUH4 622 aa13.22□□□□□ -0.29
CD48-203ENST00000613788 SVOPLQ8N434 492 aa13.22□□□□□ -0.29
CD48-203ENST00000613788 C10orf53Q8N6V4 93 aa13.22□□□□□ -0.29
CD48-203ENST00000613788 OR2V1Q8NHB1 315 aa13.22□□□□□ -0.29
CD48-203ENST00000613788 PFN4Q8NHR9 129 aa13.22□□□□□ -0.29
CD48-203ENST00000613788 MFSD8Q8NHS3 518 aa13.22□□□□□ -0.29
CD48-203ENST00000613788 GIPC3Q8TF64 312 aa13.22□□□□□ -0.29
CD48-203ENST00000613788 TAAR8Q969N4 342 aa13.22□□□□□ -0.29
CD48-203ENST00000613788 MIB2Q96AX9 1013 aa13.22□□□□□ -0.29
CD48-203ENST00000613788 BPIFA2Q96DR5 249 aa13.22□□□□□ -0.29
CD48-203ENST00000613788 SGTBQ96EQ0 304 aa13.22□□□□□ -0.29
CD48-203ENST00000613788 PRDM14Q9GZV8 571 aa13.22□□□□□ -0.29
CD48-203ENST00000613788 MEPEQ9NQ76 525 aaPredicted RBP13.22□□□□□ -0.29
CD48-203ENST00000613788 PDP1Q9P0J1 537 aaPredicted RBP13.22□□□□□ -0.29
CD48-203ENST00000613788 TNFRSF10DQ9UBN6 386 aa13.22□□□□□ -0.29
CD48-203ENST00000613788 CAMK2AQ9UQM7 478 aa13.22□□□□□ -0.29
CD48-203ENST00000613788 TLN1Q9Y490 2541 aaKnown RBP13.21□□□□□ -0.29
CD48-203ENST00000613788 EPG5Q9HCE0 2579 aa13.21□□□□□ -0.29
CD48-203ENST00000613788 A0A1W2PNR3 127 aa13.21□□□□□ -0.29
CD48-203ENST00000613788 TNFSF11O14788 317 aa13.21□□□□□ -0.29
CD48-203ENST00000613788 MT-ATP6P00846 226 aa13.21□□□□□ -0.29
CD48-203ENST00000613788 IFI30P13284 250 aa13.21□□□□□ -0.29
CD48-203ENST00000613788 ABOP16442 354 aa13.21□□□□□ -0.29
CD48-203ENST00000613788 DIO1P49895 249 aa13.21□□□□□ -0.29
CD48-203ENST00000613788 RAC3P60763 192 aa13.21□□□□□ -0.29
CD48-203ENST00000613788 SLC35A1P78382 337 aa13.21□□□□□ -0.29
CD48-203ENST00000613788 SF3B4Q15427 424 aaKnown RBP eCLIP13.21□□□□□ -0.29
CD48-203ENST00000613788 SGCBQ16585 318 aa13.21□□□□□ -0.29
CD48-203ENST00000613788 CTU2Q2VPK5 515 aaKnown RBP13.21□□□□□ -0.29
CD48-203ENST00000613788 C1QL3Q5VWW1 255 aa13.21□□□□□ -0.29
CD48-203ENST00000613788 PRICKLE2Q7Z3G6 844 aa13.21□□□□□ -0.29
CD48-203ENST00000613788 TMEM179BQ7Z7N9 219 aa13.21□□□□□ -0.29
CD48-203ENST00000613788 ICA1LQ8NDH6 482 aa13.21□□□□□ -0.29
CD48-203ENST00000613788 OR10G2Q8NGC3 310 aa13.21□□□□□ -0.29
CD48-203ENST00000613788 OSTF1Q92882 214 aa13.21□□□□□ -0.29
CD48-203ENST00000613788 RELTQ969Z4 430 aa13.21□□□□□ -0.29
CD48-203ENST00000613788 SDCCAG3Q96C92 435 aa13.21□□□□□ -0.29
CD48-203ENST00000613788 SLC25A36Q96CQ1 311 aa13.21□□□□□ -0.29
CD48-203ENST00000613788 ADGRG7Q96K78 797 aa13.21□□□□□ -0.29
CD48-203ENST00000613788 FREM3P0C091 2139 aa13.2□□□□□ -0.3
CD48-203ENST00000613788 ARRDC5A6NEK1 342 aa13.2□□□□□ -0.3
CD48-203ENST00000613788 LIPT2A6NK58 231 aa13.2□□□□□ -0.3
CD48-203ENST00000613788 ENO4A6NNW6 628 aa13.2□□□□□ -0.3
CD48-203ENST00000613788 AHRRA9YTQ3 701 aa13.2□□□□□ -0.3
CD48-203ENST00000613788 H0YC42 278 aa13.2□□□□□ -0.3
CD48-203ENST00000613788 DNPH1O43598 174 aa13.2□□□□□ -0.3
CD48-203ENST00000613788 PIP5K1CO60331 668 aa13.2□□□□□ -0.3
CD48-203ENST00000613788 EIF1BO60739 113 aaKnown RBP13.2□□□□□ -0.3
CD48-203ENST00000613788 CH25HO95992 272 aa13.2□□□□□ -0.3
CD48-203ENST00000613788 IMPDH2P12268 514 aa13.2□□□□□ -0.3
CD48-203ENST00000613788 GTF2E2P29084 291 aaKnown RBP13.2□□□□□ -0.3
CD48-203ENST00000613788 EIF1AXP47813 144 aaKnown RBP13.2□□□□□ -0.3
CD48-203ENST00000613788 TPD52P55327 224 aaPredicted RBP13.2□□□□□ -0.3
CD48-203ENST00000613788 CLDN15P56746 228 aa13.2□□□□□ -0.3
CD48-203ENST00000613788 NUP107P57740 925 aa13.2□□□□□ -0.3
CD48-203ENST00000613788 OR2B6P58173 313 aa13.2□□□□□ -0.3
CD48-203ENST00000613788 LSM11P83369 360 aaKnown RBP eCLIP13.2□□□□□ -0.3
CD48-203ENST00000613788 LAPTM4AQ15012 233 aa13.2□□□□□ -0.3
CD48-203ENST00000613788 OR7A5Q15622 319 aa13.2□□□□□ -0.3
CD48-203ENST00000613788 ZNF74Q16587 644 aa13.2□□□□□ -0.3
CD48-203ENST00000613788 GXYLT1Q4G148 440 aa13.2□□□□□ -0.3
CD48-203ENST00000613788 C1orf94Q6P1W5 598 aa13.2□□□□□ -0.3
CD48-203ENST00000613788 TMPRSS11FQ6ZWK6 438 aa13.2□□□□□ -0.3
CD48-203ENST00000613788 MAMDC2Q7Z304 686 aaPredicted RBP13.2□□□□□ -0.3
CD48-203ENST00000613788 ST6GALNAC3Q8NDV1 305 aa13.2□□□□□ -0.3
CD48-203ENST00000613788 OR10D3Q8NH80 312 aa13.2□□□□□ -0.3
CD48-203ENST00000613788 GNPDA2Q8TDQ7 276 aa13.2□□□□□ -0.3
CD48-203ENST00000613788 ZHX1-C8orf76Q96EF9 292 aa13.2□□□□□ -0.3
CD48-203ENST00000613788 BBC3Q96PG8 261 aaPredicted RBP13.2□□□□□ -0.3
CD48-203ENST00000613788 PSD2Q9BQI7 771 aa13.2□□□□□ -0.3
CD48-203ENST00000613788 PTDSS2Q9BVG9 487 aa13.2□□□□□ -0.3
CD48-203ENST00000613788 COQ10BQ9H8M1 238 aa13.2□□□□□ -0.3
CD48-203ENST00000613788 FKRPQ9H9S5 495 aa13.2□□□□□ -0.3
CD48-203ENST00000613788 RNPEPL1Q9HAU8 725 aa13.2□□□□□ -0.3
CD48-203ENST00000613788 NANSQ9NR45 359 aa13.2□□□□□ -0.3
CD48-203ENST00000613788 C20orf141Q9NUB4 165 aa13.2□□□□□ -0.3
CD48-203ENST00000613788 OAZ3Q9UMX2 235 aa13.2□□□□□ -0.3
CD48-203ENST00000613788 MGAT4BQ9UQ53 548 aa13.2□□□□□ -0.3
CD48-203ENST00000613788 EIF4E1BA6NMX2 242 aaKnown RBP13.19□□□□□ -0.3
CD48-203ENST00000613788 EFCAB9A8MZ26 197 aa13.19□□□□□ -0.3
CD48-203ENST00000613788 FTCDNL1E5RQL4 147 aa13.19□□□□□ -0.3
CD48-203ENST00000613788 CXCL13O43927 109 aa13.19□□□□□ -0.3
CD48-203ENST00000613788 OR7A10O76100 309 aa13.19□□□□□ -0.3
CD48-203ENST00000613788 BGLAPP02818 100 aa13.19□□□□□ -0.3
CD48-203ENST00000613788 HIST1H2ABP04908 130 aa13.19□□□□□ -0.3
CD48-203ENST00000613788 TPOP07202 933 aa13.19□□□□□ -0.3
CD48-203ENST00000613788 ANXA8P13928 327 aa13.19□□□□□ -0.3
CD48-203ENST00000613788 GABRA1P14867 456 aa13.19□□□□□ -0.3
CD48-203ENST00000613788 FUT1P19526 365 aa13.19□□□□□ -0.3
CD48-203ENST00000613788 OMPP47874 163 aa13.19□□□□□ -0.3
CD48-203ENST00000613788 SLC34A1Q06495 639 aa13.19□□□□□ -0.3
CD48-203ENST00000613788 PGBD2Q6P3X8 592 aa13.19□□□□□ -0.3
CD48-203ENST00000613788 HIST3H2AQ7L7L0 130 aa13.19□□□□□ -0.3
CD48-203ENST00000613788 FGD2Q7Z6J4 655 aa13.19□□□□□ -0.3
CD48-203ENST00000613788 ZER1Q7Z7L7 766 aa13.19□□□□□ -0.3
CD48-203ENST00000613788 STK32CQ86UX6 486 aa13.19□□□□□ -0.3
CD48-203ENST00000613788 CHERPQ8IWX8 916 aaKnown RBP13.19□□□□□ -0.3
CD48-203ENST00000613788 AQP11Q8NBQ7 271 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms