RNA–Protein interactions for RNA: ENST00000612795.1

CSNK1E-215, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-215ENST00000612795 MATN1P21941 496 aa14.91□□□□□ -0.02
CSNK1E-215ENST00000612795 PGM1P36871 562 aa14.91□□□□□ -0.02
CSNK1E-215ENST00000612795 DNAJB13P59910 316 aa14.91□□□□□ -0.02
CSNK1E-215ENST00000612795 TUBA1BP68363 451 aa14.91□□□□□ -0.02
CSNK1E-215ENST00000612795 TUBA4AP68366 448 aa14.91□□□□□ -0.02
CSNK1E-215ENST00000612795 IL1RL1Q01638 556 aa14.91□□□□□ -0.02
CSNK1E-215ENST00000612795 OTUD3Q5T2D3 398 aaPredicted RBP14.91□□□□□ -0.02
CSNK1E-215ENST00000612795 RNF165Q6ZSG1 346 aa14.91□□□□□ -0.02
CSNK1E-215ENST00000612795 TUBA1AQ71U36 451 aa14.91□□□□□ -0.02
CSNK1E-215ENST00000612795 PEG10Q86TG7 708 aaKnown RBP14.91□□□□□ -0.02
CSNK1E-215ENST00000612795 NATD1Q8N6N6 113 aa14.91□□□□□ -0.02
CSNK1E-215ENST00000612795 CCDC63Q8NA47 563 aa14.91□□□□□ -0.02
CSNK1E-215ENST00000612795 NUP37Q8NFH4 326 aa14.91□□□□□ -0.02
CSNK1E-215ENST00000612795 OR1K1Q8NGR3 316 aa14.91□□□□□ -0.02
CSNK1E-215ENST00000612795 TMEM186Q96B77 213 aa14.91□□□□□ -0.02
CSNK1E-215ENST00000612795 AURKBQ96GD4 344 aaPredicted RBP14.91□□□□□ -0.02
CSNK1E-215ENST00000612795 SLC35G5Q96KT7 338 aa14.91□□□□□ -0.02
CSNK1E-215ENST00000612795 ANKRD27Q96NW4 1050 aa14.91□□□□□ -0.02
CSNK1E-215ENST00000612795 JMJD8Q96S16 334 aa14.91□□□□□ -0.02
CSNK1E-215ENST00000612795 ZNF350Q9GZX5 532 aa14.91□□□□□ -0.02
CSNK1E-215ENST00000612795 TUBB1Q9H4B7 451 aa14.91□□□□□ -0.02
CSNK1E-215ENST00000612795 NARFLQ9H6Q4 476 aa14.91□□□□□ -0.02
CSNK1E-215ENST00000612795 ZNF442Q9H7R0 627 aa14.91□□□□□ -0.02
CSNK1E-215ENST00000612795 HIF1ANQ9NWT6 349 aa14.91□□□□□ -0.02
CSNK1E-215ENST00000612795 TMED7-TICAM2A0A0A6YYA0 188 aa14.9□□□□□ -0.02
CSNK1E-215ENST00000612795 ZNF587BE7ETH6 402 aa14.9□□□□□ -0.02
CSNK1E-215ENST00000612795 BCAS1O75363 584 aaPredicted RBP14.9□□□□□ -0.02
CSNK1E-215ENST00000612795 LGI1O95970 557 aa14.9□□□□□ -0.02
CSNK1E-215ENST00000612795 PROCP04070 461 aa14.9□□□□□ -0.02
CSNK1E-215ENST00000612795 ABHD2P08910 425 aa14.9□□□□□ -0.02
CSNK1E-215ENST00000612795 IMPDH2P12268 514 aa14.9□□□□□ -0.02
CSNK1E-215ENST00000612795 CALCRP30988 508 aa14.9□□□□□ -0.02
CSNK1E-215ENST00000612795 HTR3AP46098 478 aa14.9□□□□□ -0.02
CSNK1E-215ENST00000612795 HILS1P60008 231 aa14.9□□□□□ -0.02
CSNK1E-215ENST00000612795 PTGR1Q14914 329 aa14.9□□□□□ -0.02
CSNK1E-215ENST00000612795 ARHGAP11BQ3KRB8 267 aa14.9□□□□□ -0.02
CSNK1E-215ENST00000612795 ANKRD16Q6P6B7 361 aa14.9□□□□□ -0.02
CSNK1E-215ENST00000612795 EMBQ6PCB8 327 aa14.9□□□□□ -0.02
CSNK1E-215ENST00000612795 PAQR6Q6TCH4 344 aa14.9□□□□□ -0.02
CSNK1E-215ENST00000612795 GPAT4Q86UL3 456 aa14.9□□□□□ -0.02
CSNK1E-215ENST00000612795 ARFGAP2Q8N6H7 521 aa14.9□□□□□ -0.02
CSNK1E-215ENST00000612795 BOD1Q96IK1 185 aa14.9□□□□□ -0.02
CSNK1E-215ENST00000612795 ZNF385AQ96PM9 386 aaKnown RBP14.9□□□□□ -0.02
CSNK1E-215ENST00000612795 ALKBH3Q96Q83 286 aaPredicted RBP14.9□□□□□ -0.02
CSNK1E-215ENST00000612795 PRPF18Q99633 342 aaKnown RBP14.9□□□□□ -0.02
CSNK1E-215ENST00000612795 TPK1Q9H3S4 243 aa14.9□□□□□ -0.02
CSNK1E-215ENST00000612795 SERHL2Q9H4I8 314 aa14.9□□□□□ -0.02
CSNK1E-215ENST00000612795 MOV10Q9HCE1 1003 aaKnown RBP14.9□□□□□ -0.02
CSNK1E-215ENST00000612795 EXD2Q9NVH0 621 aa14.9□□□□□ -0.02
CSNK1E-215ENST00000612795 PSMC3IPQ9P2W1 217 aaPredicted RBP14.9□□□□□ -0.02
CSNK1E-215ENST00000612795 TBK1Q9UHD2 729 aa14.9□□□□□ -0.02
CSNK1E-215ENST00000612795 USP22Q9UPT9 525 aa14.9□□□□□ -0.02
CSNK1E-215ENST00000612795 TMED7Q9Y3B3 224 aa14.9□□□□□ -0.02
CSNK1E-215ENST00000612795 SPEF1Q9Y4P9 236 aa14.9□□□□□ -0.02
CSNK1E-215ENST00000612795 LYNX1G3V0Z9 82 aa14.89□□□□□ -0.03
CSNK1E-215ENST00000612795 LYNX1P0DP58 116 aa14.89□□□□□ -0.03
CSNK1E-215ENST00000612795 THBS4P35443 961 aa14.89□□□□□ -0.03
CSNK1E-215ENST00000612795 LIMS1P48059 325 aa14.89□□□□□ -0.03
CSNK1E-215ENST00000612795 IDH2P48735 452 aaKnown RBP14.89□□□□□ -0.03
CSNK1E-215ENST00000612795 KHKP50053 298 aa14.89□□□□□ -0.03
CSNK1E-215ENST00000612795 MAPK14Q16539 360 aa14.89□□□□□ -0.03
CSNK1E-215ENST00000612795 C3orf36Q3SXR2 165 aa14.89□□□□□ -0.03
CSNK1E-215ENST00000612795 CCDC153Q494R4 210 aa14.89□□□□□ -0.03
CSNK1E-215ENST00000612795 PDLIM3Q53GG5 364 aaPredicted RBP14.89□□□□□ -0.03
CSNK1E-215ENST00000612795 AWAT1Q58HT5 328 aa14.89□□□□□ -0.03
CSNK1E-215ENST00000612795 PRR31Q5SQ13 230 aa14.89□□□□□ -0.03
CSNK1E-215ENST00000612795 ATAD3BQ5T9A4 648 aa14.89□□□□□ -0.03
CSNK1E-215ENST00000612795 KANK2Q63ZY3 851 aa14.89□□□□□ -0.03
CSNK1E-215ENST00000612795 OR9K2Q8NGE7 335 aa14.89□□□□□ -0.03
CSNK1E-215ENST00000612795 CKAP2Q8WWK9 683 aa14.89□□□□□ -0.03
CSNK1E-215ENST00000612795 OIT3Q8WWZ8 545 aa14.89□□□□□ -0.03
CSNK1E-215ENST00000612795 PMM1Q92871 262 aa14.89□□□□□ -0.03
CSNK1E-215ENST00000612795 LRRC37BQ96QE4 947 aa14.89□□□□□ -0.03
CSNK1E-215ENST00000612795 DOK1Q99704 481 aa14.89□□□□□ -0.03
CSNK1E-215ENST00000612795 SEC61A2Q9H9S3 476 aa14.89□□□□□ -0.03
CSNK1E-215ENST00000612795 OXSMQ9NWU1 459 aa14.89□□□□□ -0.03
CSNK1E-215ENST00000612795 CRNNQ9UBG3 495 aaPredicted RBP14.89□□□□□ -0.03
CSNK1E-215ENST00000612795 WDR45Q9Y484 360 aa14.89□□□□□ -0.03
CSNK1E-215ENST00000612795 DNAJC15Q9Y5T4 150 aa14.89□□□□□ -0.03
CSNK1E-215ENST00000612795 A0A096LPE4 126 aa14.88□□□□□ -0.03
CSNK1E-215ENST00000612795 ARPC4-TTLL3A0A0A6YYG9 625 aa14.88□□□□□ -0.03
CSNK1E-215ENST00000612795 RNF103-CHMP3A0A140T963 221 aa14.88□□□□□ -0.03
CSNK1E-215ENST00000612795 A0A1W2PPZ6 126 aa14.88□□□□□ -0.03
CSNK1E-215ENST00000612795 TMEM72A0PK05 275 aa14.88□□□□□ -0.03
CSNK1E-215ENST00000612795 NR5A2O00482 541 aa14.88□□□□□ -0.03
CSNK1E-215ENST00000612795 LYPLA1O75608 230 aaPredicted RBP14.88□□□□□ -0.03
CSNK1E-215ENST00000612795 MSMBP08118 114 aa14.88□□□□□ -0.03
CSNK1E-215ENST00000612795 ADRA2AP08913 450 aa14.88□□□□□ -0.03
CSNK1E-215ENST00000612795 EPHA1P21709 976 aa14.88□□□□□ -0.03
CSNK1E-215ENST00000612795 POLR2HP52434 150 aaKnown RBP14.88□□□□□ -0.03
CSNK1E-215ENST00000612795 HBA1P69905 142 aa14.88□□□□□ -0.03
CSNK1E-215ENST00000612795 SYT10Q6XYQ8 523 aa14.88□□□□□ -0.03
CSNK1E-215ENST00000612795 USP43Q70EL4 1123 aa14.88□□□□□ -0.03
CSNK1E-215ENST00000612795 C6orf120Q7Z4R8 191 aa14.88□□□□□ -0.03
CSNK1E-215ENST00000612795 LSRQ86X29 649 aaPredicted RBP14.88□□□□□ -0.03
CSNK1E-215ENST00000612795 CDK20Q8IZL9 346 aa14.88□□□□□ -0.03
CSNK1E-215ENST00000612795 OR51F2Q8NH61 342 aa14.88□□□□□ -0.03
CSNK1E-215ENST00000612795 CLDND2Q8NHS1 167 aa14.88□□□□□ -0.03
CSNK1E-215ENST00000612795 TWIST2Q8WVJ9 160 aa14.88□□□□□ -0.03
CSNK1E-215ENST00000612795 PPP3R2Q96LZ3 170 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms