RNA–Protein interactions for RNA: ENST00000609587.1

SMCHD1-213, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

Gene SMCHD1, Length 460 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-213ENST00000609587 LRRC39Q96DD0 335 aa3.07□□□□□ -1.92
SMCHD1-213ENST00000609587 IL4I1Q96RQ9 567 aa3.07□□□□□ -1.92
SMCHD1-213ENST00000609587 ZNF184Q99676 751 aaPredicted RBP3.07□□□□□ -1.92
SMCHD1-213ENST00000609587 OMDQ99983 421 aa3.07□□□□□ -1.92
SMCHD1-213ENST00000609587 LLPHQ9BRT6 129 aaKnown RBP3.07□□□□□ -1.92
SMCHD1-213ENST00000609587 CHIAQ9BZP6 476 aa3.07□□□□□ -1.92
SMCHD1-213ENST00000609587 SDHAF3Q9NRP4 125 aa3.07□□□□□ -1.92
SMCHD1-213ENST00000609587 ONECUT1Q9UBC0 465 aa3.07□□□□□ -1.92
SMCHD1-213ENST00000609587 ZNF221Q9UK13 617 aa3.07□□□□□ -1.92
SMCHD1-213ENST00000609587 SNX6Q9UNH7 406 aa3.07□□□□□ -1.92
SMCHD1-213ENST00000609587 ABCG2Q9UNQ0 655 aa3.07□□□□□ -1.92
SMCHD1-213ENST00000609587 KIF27Q86VH2 1401 aa3.07□□□□□ -1.92
SMCHD1-213ENST00000609587 IGHV2-70DA0A0C4DH43 119 aa3.06□□□□□ -1.92
SMCHD1-213ENST00000609587 FAM47DPA6NHR8 397 aa3.06□□□□□ -1.92
SMCHD1-213ENST00000609587 ZNF705EA8MWA4 302 aaPredicted RBP3.06□□□□□ -1.92
SMCHD1-213ENST00000609587 NPIPA7E9PJI5 369 aa3.06□□□□□ -1.92
SMCHD1-213ENST00000609587 G3V4G9 280 aa3.06□□□□□ -1.92
SMCHD1-213ENST00000609587 SULT2B1O00204 365 aa3.06□□□□□ -1.92
SMCHD1-213ENST00000609587 TPST2O60704 377 aa3.06□□□□□ -1.92
SMCHD1-213ENST00000609587 LRATO95237 230 aa3.06□□□□□ -1.92
SMCHD1-213ENST00000609587 GNA14O95837 355 aa3.06□□□□□ -1.92
SMCHD1-213ENST00000609587 KRT14P02533 472 aa3.06□□□□□ -1.92
SMCHD1-213ENST00000609587 SEMG1P04279 462 aa3.06□□□□□ -1.92
SMCHD1-213ENST00000609587 UGT2B4P06133 528 aa3.06□□□□□ -1.92
SMCHD1-213ENST00000609587 KRTAP1-4P0C5Y4 121 aa3.06□□□□□ -1.92
SMCHD1-213ENST00000609587 NPIPA8P0DM63 369 aa3.06□□□□□ -1.92
SMCHD1-213ENST00000609587 UQCRC2P22695 453 aa3.06□□□□□ -1.92
SMCHD1-213ENST00000609587 NTSP30990 170 aa3.06□□□□□ -1.92
SMCHD1-213ENST00000609587 CD80P33681 288 aa3.06□□□□□ -1.92
SMCHD1-213ENST00000609587 LONP1P36776 959 aaKnown RBP3.06□□□□□ -1.92
SMCHD1-213ENST00000609587 RGS4P49798 205 aa3.06□□□□□ -1.92
SMCHD1-213ENST00000609587 STX17P56962 302 aa3.06□□□□□ -1.92
SMCHD1-213ENST00000609587 RIPPLY3P57055 190 aa3.06□□□□□ -1.92
SMCHD1-213ENST00000609587 MAP3K7CLP57077 242 aa3.06□□□□□ -1.92
SMCHD1-213ENST00000609587 KRTAP10-1P60331 282 aa3.06□□□□□ -1.92
SMCHD1-213ENST00000609587 SARNPP82979 210 aaKnown RBP3.06□□□□□ -1.92
SMCHD1-213ENST00000609587 SLC10A7Q0GE19 358 aa3.06□□□□□ -1.92
SMCHD1-213ENST00000609587 PTCH1Q13635 1447 aa3.06□□□□□ -1.92
SMCHD1-213ENST00000609587 ELAVL3Q14576 367 aaKnown RBP3.06□□□□□ -1.92
SMCHD1-213ENST00000609587 ZSCAN26Q16670 478 aa3.06□□□□□ -1.92
SMCHD1-213ENST00000609587 CFAP157Q5JU67 520 aa3.06□□□□□ -1.92
SMCHD1-213ENST00000609587 LCE1CQ5T751 118 aa3.06□□□□□ -1.92
SMCHD1-213ENST00000609587 LCE1BQ5T7P3 118 aa3.06□□□□□ -1.92
SMCHD1-213ENST00000609587 KCNIP4Q6PIL6 250 aa3.06□□□□□ -1.92
SMCHD1-213ENST00000609587 DEGS2Q6QHC5 323 aa3.06□□□□□ -1.92
SMCHD1-213ENST00000609587 HSD17B13Q7Z5P4 300 aaPredicted RBP3.06□□□□□ -1.92
SMCHD1-213ENST00000609587 TMCO2Q7Z6W1 182 aaPredicted RBP3.06□□□□□ -1.92
SMCHD1-213ENST00000609587 PPP1R27Q86WC6 154 aa3.06□□□□□ -1.92
SMCHD1-213ENST00000609587 C17orf82Q86X59 251 aaPredicted RBP3.06□□□□□ -1.92
SMCHD1-213ENST00000609587 ZNF565Q8N9K5 539 aa3.06□□□□□ -1.92
SMCHD1-213ENST00000609587 OR10A7Q8NGE5 316 aa3.06□□□□□ -1.92
SMCHD1-213ENST00000609587 AKR7LQ8NHP1 331 aa3.06□□□□□ -1.92
SMCHD1-213ENST00000609587 ZNF564Q8TBZ8 553 aaPredicted RBP3.06□□□□□ -1.92
SMCHD1-213ENST00000609587 DNAJA4Q8WW22 397 aaPredicted RBP3.06□□□□□ -1.92
SMCHD1-213ENST00000609587 FBXO32Q969P5 355 aa3.06□□□□□ -1.92
SMCHD1-213ENST00000609587 NEIL2Q969S2 332 aa3.06□□□□□ -1.92
SMCHD1-213ENST00000609587 C16orf74Q96GX8 76 aa3.06□□□□□ -1.92
SMCHD1-213ENST00000609587 MTMR9Q96QG7 549 aa3.06□□□□□ -1.92
SMCHD1-213ENST00000609587 PLIN2Q99541 437 aa3.06□□□□□ -1.92
SMCHD1-213ENST00000609587 MCHR1Q99705 422 aa3.06□□□□□ -1.92
SMCHD1-213ENST00000609587 SPACA1Q9HBV2 294 aa3.06□□□□□ -1.92
SMCHD1-213ENST00000609587 IL26Q9NPH9 171 aa3.06□□□□□ -1.92
SMCHD1-213ENST00000609587 MED4Q9NPJ6 270 aa3.06□□□□□ -1.92
SMCHD1-213ENST00000609587 IL17CQ9P0M4 197 aa3.06□□□□□ -1.92
SMCHD1-213ENST00000609587 ADAMTS9Q9P2N4 1935 aa3.06□□□□□ -1.92
SMCHD1-213ENST00000609587 RNF14Q9UBS8 474 aa3.06□□□□□ -1.92
SMCHD1-213ENST00000609587 ANGPTL2Q9UKU9 493 aa3.06□□□□□ -1.92
SMCHD1-213ENST00000609587 UBQLN1Q9UMX0 589 aaKnown RBP3.06□□□□□ -1.92
SMCHD1-213ENST00000609587 NPIPA1Q9UND3 350 aa3.06□□□□□ -1.92
SMCHD1-213ENST00000609587 MRPS7Q9Y2R9 242 aaKnown RBP3.06□□□□□ -1.92
SMCHD1-213ENST00000609587 PLLPQ9Y342 182 aa3.06□□□□□ -1.92
SMCHD1-213ENST00000609587 IGHV7-81A0A0B4J1V7 117 aa3.05□□□□□ -1.92
SMCHD1-213ENST00000609587 A0A1B0GTQ1 180 aa3.05□□□□□ -1.92
SMCHD1-213ENST00000609587 HEATR9A2RTY3 570 aa3.05□□□□□ -1.92
SMCHD1-213ENST00000609587 GOLGA8OA6NCC3 632 aa3.05□□□□□ -1.92
SMCHD1-213ENST00000609587 TUBAL3A6NHL2 446 aa3.05□□□□□ -1.92
SMCHD1-213ENST00000609587 A8MU10 97 aa3.05□□□□□ -1.92
SMCHD1-213ENST00000609587 GOLGA8NF8WBI6 632 aa3.05□□□□□ -1.92
SMCHD1-213ENST00000609587 K7EQM0 130 aa3.05□□□□□ -1.92
SMCHD1-213ENST00000609587 K7ERQ8 282 aa3.05□□□□□ -1.92
SMCHD1-213ENST00000609587 NVLO15381 856 aaKnown RBP3.05□□□□□ -1.92
SMCHD1-213ENST00000609587 CAPN1P07384 714 aa3.05□□□□□ -1.92
SMCHD1-213ENST00000609587 ZNF19P17023 458 aa3.05□□□□□ -1.92
SMCHD1-213ENST00000609587 CYP2B6P20813 491 aa3.05□□□□□ -1.92
SMCHD1-213ENST00000609587 B2MP61769 119 aa3.05□□□□□ -1.92
SMCHD1-213ENST00000609587 CBX1P83916 185 aa3.05□□□□□ -1.92
SMCHD1-213ENST00000609587 ZMYND11Q15326 602 aa3.05□□□□□ -1.92
SMCHD1-213ENST00000609587 BCL7AQ4VC05 210 aa3.05□□□□□ -1.92
SMCHD1-213ENST00000609587 ATF7IP2Q5U623 682 aa3.05□□□□□ -1.92
SMCHD1-213ENST00000609587 ZNF544Q6NX49 715 aa3.05□□□□□ -1.92
SMCHD1-213ENST00000609587 SYT10Q6XYQ8 523 aa3.05□□□□□ -1.92
SMCHD1-213ENST00000609587 TMEM179BQ7Z7N9 219 aa3.05□□□□□ -1.92
SMCHD1-213ENST00000609587 TPRA1Q86W33 373 aa3.05□□□□□ -1.92
SMCHD1-213ENST00000609587 NRMQ8IXM6 262 aa3.05□□□□□ -1.92
SMCHD1-213ENST00000609587 DHRSXQ8N5I4 330 aa3.05□□□□□ -1.92
SMCHD1-213ENST00000609587 CSGALNACT2Q8N6G5 542 aa3.05□□□□□ -1.92
SMCHD1-213ENST00000609587 KIR3DL3Q8N743 410 aa3.05□□□□□ -1.92
SMCHD1-213ENST00000609587 SYT14Q8NB59 555 aa3.05□□□□□ -1.92
SMCHD1-213ENST00000609587 RAB3IL1Q8TBN0 382 aa3.05□□□□□ -1.92
SMCHD1-213ENST00000609587 OR1E3Q8WZA6 343 aa3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms