RNA–Protein interactions for RNA: ENST00000606749.1

CUX1-219, Transcript of cut like homeobox 1, humanhuman

TSL 4

Gene CUX1, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-219ENST00000606749 ADAM21Q9UKJ8 722 aa6.7□□□□□ -1.34
CUX1-219ENST00000606749 PRDM4Q9UKN5 801 aa6.7□□□□□ -1.34
CUX1-219ENST00000606749 MGAT4BQ9UQ53 548 aa6.7□□□□□ -1.34
CUX1-219ENST00000606749 FLVCR1Q9Y5Y0 555 aa6.7□□□□□ -1.34
CUX1-219ENST00000606749 ABCA2Q9BZC7 2435 aa6.69□□□□□ -1.34
CUX1-219ENST00000606749 TMEM120BA0PK00 339 aa6.69□□□□□ -1.34
CUX1-219ENST00000606749 CDHR4A6H8M9 788 aa6.69□□□□□ -1.34
CUX1-219ENST00000606749 SLCO1B7G3V0H7 640 aa6.69□□□□□ -1.34
CUX1-219ENST00000606749 ZNF500O60304 480 aaPredicted RBP6.69□□□□□ -1.34
CUX1-219ENST00000606749 CRLF1O75462 422 aa6.69□□□□□ -1.34
CUX1-219ENST00000606749 SLC22A3O75751 556 aa6.69□□□□□ -1.34
CUX1-219ENST00000606749 GPIP06744 558 aa6.69□□□□□ -1.34
CUX1-219ENST00000606749 TFPTP0C1Z6 253 aa6.69□□□□□ -1.34
CUX1-219ENST00000606749 GKN3PP0CG01 181 aa6.69□□□□□ -1.34
CUX1-219ENST00000606749 ZCCHC18P0CG32 403 aa6.69□□□□□ -1.34
CUX1-219ENST00000606749 IDO1P14902 403 aa6.69□□□□□ -1.34
CUX1-219ENST00000606749 TTKP33981 857 aa6.69□□□□□ -1.34
CUX1-219ENST00000606749 ZNF83P51522 516 aa6.69□□□□□ -1.34
CUX1-219ENST00000606749 SLC18A1P54219 525 aa6.69□□□□□ -1.34
CUX1-219ENST00000606749 IRX1P78414 480 aaPredicted RBP6.69□□□□□ -1.34
CUX1-219ENST00000606749 SPOCK1Q08629 439 aa6.69□□□□□ -1.34
CUX1-219ENST00000606749 CEACAM7Q14002 265 aa6.69□□□□□ -1.34
CUX1-219ENST00000606749 SLC9B1Q4ZJI4 515 aa6.69□□□□□ -1.34
CUX1-219ENST00000606749 PDCD4Q53EL6 469 aaKnown RBP6.69□□□□□ -1.34
CUX1-219ENST00000606749 TSPO2Q5TGU0 170 aa6.69□□□□□ -1.34
CUX1-219ENST00000606749 NXNQ6DKJ4 435 aa6.69□□□□□ -1.34
CUX1-219ENST00000606749 C11orf71Q6IPW1 123 aa6.69□□□□□ -1.34
CUX1-219ENST00000606749 SLC22A25Q6T423 547 aa6.69□□□□□ -1.34
CUX1-219ENST00000606749 PAQR6Q6TCH4 344 aa6.69□□□□□ -1.34
CUX1-219ENST00000606749 CASP12Q6UXS9 341 aa6.69□□□□□ -1.34
CUX1-219ENST00000606749 VRK2Q86Y07 508 aa6.69□□□□□ -1.34
CUX1-219ENST00000606749 ZNF440Q8IYI8 595 aa6.69□□□□□ -1.34
CUX1-219ENST00000606749 CLIP4Q8N3C7 705 aa6.69□□□□□ -1.34
CUX1-219ENST00000606749 TMEM99Q8N816 258 aa6.69□□□□□ -1.34
CUX1-219ENST00000606749 OR10H5Q8NGA6 315 aa6.69□□□□□ -1.34
CUX1-219ENST00000606749 OR52P1PQ8NH57 321 aa6.69□□□□□ -1.34
CUX1-219ENST00000606749 SLC38A5Q8WUX1 472 aa6.69□□□□□ -1.34
CUX1-219ENST00000606749 HS6ST2Q96MM7 605 aa6.69□□□□□ -1.34
CUX1-219ENST00000606749 DHRS9Q9BPW9 319 aa6.69□□□□□ -1.34
CUX1-219ENST00000606749 AMBRA1Q9C0C7 1298 aa6.69□□□□□ -1.34
CUX1-219ENST00000606749 BARX1Q9HBU1 254 aaPredicted RBP6.69□□□□□ -1.34
CUX1-219ENST00000606749 CBLN4Q9NTU7 201 aa6.69□□□□□ -1.34
CUX1-219ENST00000606749 UPB1Q9UBR1 384 aa6.69□□□□□ -1.34
CUX1-219ENST00000606749 DCTN4Q9UJW0 460 aa6.69□□□□□ -1.34
CUX1-219ENST00000606749 SLC9A8Q9Y2E8 581 aa6.69□□□□□ -1.34
CUX1-219ENST00000606749 ALPK2Q86TB3 2170 aa6.69□□□□□ -1.34
CUX1-219ENST00000606749 HIVEP2P31629 2446 aa6.69□□□□□ -1.34
CUX1-219ENST00000606749 NSD1Q96L73 2696 aaPredicted RBP6.68□□□□□ -1.34
CUX1-219ENST00000606749 LIPT2A6NK58 231 aa6.68□□□□□ -1.34
CUX1-219ENST00000606749 M0R1B8 84 aa6.68□□□□□ -1.34
CUX1-219ENST00000606749 SSX4O60224 188 aa6.68□□□□□ -1.34
CUX1-219ENST00000606749 AKR7A3O95154 331 aa6.68□□□□□ -1.34
CUX1-219ENST00000606749 ETFAP13804 333 aa6.68□□□□□ -1.34
CUX1-219ENST00000606749 UQCRBP14927 111 aa6.68□□□□□ -1.34
CUX1-219ENST00000606749 CXCR1P25024 350 aa6.68□□□□□ -1.34
CUX1-219ENST00000606749 MPGP29372 298 aa6.68□□□□□ -1.34
CUX1-219ENST00000606749 CRATP43155 626 aa6.68□□□□□ -1.34
CUX1-219ENST00000606749 FABP6P51161 128 aa6.68□□□□□ -1.34
CUX1-219ENST00000606749 CRISP3P54108 245 aa6.68□□□□□ -1.34
CUX1-219ENST00000606749 TGFBR3Q03167 851 aa6.68□□□□□ -1.34
CUX1-219ENST00000606749 DMTNQ08495 405 aa6.68□□□□□ -1.34
CUX1-219ENST00000606749 BNIP2Q12982 314 aa6.68□□□□□ -1.34
CUX1-219ENST00000606749 OR7A5Q15622 319 aa6.68□□□□□ -1.34
CUX1-219ENST00000606749 NRF1Q16656 503 aa6.68□□□□□ -1.34
CUX1-219ENST00000606749 LIN52Q52LA3 116 aa6.68□□□□□ -1.34
CUX1-219ENST00000606749 OTUD3Q5T2D3 398 aaPredicted RBP6.68□□□□□ -1.34
CUX1-219ENST00000606749 C1QTNF12Q5T7M4 302 aa6.68□□□□□ -1.34
CUX1-219ENST00000606749 C9orf135Q5VTT2 229 aa6.68□□□□□ -1.34
CUX1-219ENST00000606749 ATG16L1Q676U5 607 aa6.68□□□□□ -1.34
CUX1-219ENST00000606749 TMEM225Q6GV28 225 aa6.68□□□□□ -1.34
CUX1-219ENST00000606749 WBP2NLQ6ICG8 309 aa6.68□□□□□ -1.34
CUX1-219ENST00000606749 B3GLCTQ6Y288 498 aa6.68□□□□□ -1.34
CUX1-219ENST00000606749 ZNF836Q6ZNA1 936 aa6.68□□□□□ -1.34
CUX1-219ENST00000606749 AAED1Q7RTV5 226 aa6.68□□□□□ -1.34
CUX1-219ENST00000606749 MAVSQ7Z434 540 aa6.68□□□□□ -1.34
CUX1-219ENST00000606749 FBXL14Q8N1E6 418 aa6.68□□□□□ -1.34
CUX1-219ENST00000606749 DEPDC4Q8N2C3 294 aa6.68□□□□□ -1.34
CUX1-219ENST00000606749 MUC15Q8N387 334 aa6.68□□□□□ -1.34
CUX1-219ENST00000606749 C17orf78Q8N4C9 275 aa6.68□□□□□ -1.34
CUX1-219ENST00000606749 C1orf162Q8NEQ5 155 aaPredicted RBP6.68□□□□□ -1.34
CUX1-219ENST00000606749 OR9K2Q8NGE7 335 aa6.68□□□□□ -1.34
CUX1-219ENST00000606749 MGARPQ8TDB4 240 aa6.68□□□□□ -1.34
CUX1-219ENST00000606749 TMEM45BQ96B21 275 aa6.68□□□□□ -1.34
CUX1-219ENST00000606749 BOD1Q96IK1 185 aa6.68□□□□□ -1.34
CUX1-219ENST00000606749 MAELQ96JY0 434 aaKnown RBP6.68□□□□□ -1.34
CUX1-219ENST00000606749 ADAD1Q96M93 576 aaKnown RBP6.68□□□□□ -1.34
CUX1-219ENST00000606749 ZNF385AQ96PM9 386 aaKnown RBP6.68□□□□□ -1.34
CUX1-219ENST00000606749 RHNO1Q9BSD3 238 aa6.68□□□□□ -1.34
CUX1-219ENST00000606749 SF3B5Q9BWJ5 86 aaKnown RBP6.68□□□□□ -1.34
CUX1-219ENST00000606749 CACNG6Q9BXT2 260 aa6.68□□□□□ -1.34
CUX1-219ENST00000606749 PIF1Q9H611 641 aa6.68□□□□□ -1.34
CUX1-219ENST00000606749 MANSC1Q9H8J5 431 aa6.68□□□□□ -1.34
CUX1-219ENST00000606749 TPT1P8Q9HAU6 139 aa6.68□□□□□ -1.34
CUX1-219ENST00000606749 SLC17A5Q9NRA2 495 aa6.68□□□□□ -1.34
CUX1-219ENST00000606749 SDR39U1Q9NRG7 319 aaPredicted RBP6.68□□□□□ -1.34
CUX1-219ENST00000606749 CALML5Q9NZT1 146 aa6.68□□□□□ -1.34
CUX1-219ENST00000606749 P2RX2Q9UBL9 471 aa6.68□□□□□ -1.34
CUX1-219ENST00000606749 POU2F3Q9UKI9 436 aa6.68□□□□□ -1.34
CUX1-219ENST00000606749 ZNF232Q9UNY5 417 aa6.68□□□□□ -1.34
CUX1-219ENST00000606749 CHST2Q9Y4C5 530 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms