RNA–Protein interactions for RNA: ENST00000601919.5

SSBP4-212, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-212ENST00000601919 ZIK1Q3SY52 487 aaPredicted RBP16.77■□□□□ 0.28
SSBP4-212ENST00000601919 NHSL2Q5HYW2 709 aa16.77■□□□□ 0.28
SSBP4-212ENST00000601919 WIPI1Q5MNZ9 446 aaPredicted RBP16.77■□□□□ 0.28
SSBP4-212ENST00000601919 RPUSD3Q6P087 351 aaKnown RBP16.77■□□□□ 0.28
SSBP4-212ENST00000601919 MAMDC2Q7Z304 686 aaPredicted RBP16.77■□□□□ 0.28
SSBP4-212ENST00000601919 OAFQ86UD1 273 aa16.77■□□□□ 0.28
SSBP4-212ENST00000601919 SLC43A2Q8N370 569 aa16.77■□□□□ 0.28
SSBP4-212ENST00000601919 CLDN22Q8N7P3 220 aa16.77■□□□□ 0.28
SSBP4-212ENST00000601919 RBMXL3Q8N7X1 1067 aaKnown RBP16.77■□□□□ 0.28
SSBP4-212ENST00000601919 OR5M1Q8NGP8 315 aa16.77■□□□□ 0.28
SSBP4-212ENST00000601919 CYGBQ8WWM9 190 aa16.77■□□□□ 0.28
SSBP4-212ENST00000601919 OSTF1Q92882 214 aa16.77■□□□□ 0.28
SSBP4-212ENST00000601919 KTI12Q96EK9 354 aaPredicted RBP16.77■□□□□ 0.28
SSBP4-212ENST00000601919 NPAS1Q99742 590 aa16.77■□□□□ 0.28
SSBP4-212ENST00000601919 TAPBPLQ9BX59 468 aa16.77■□□□□ 0.28
SSBP4-212ENST00000601919 TEX12Q9BXU0 123 aa16.77■□□□□ 0.28
SSBP4-212ENST00000601919 TP53TG5Q9Y2B4 290 aa16.77■□□□□ 0.28
SSBP4-212ENST00000601919 ANKRD11Q6UB99 2663 aaPredicted RBP16.76■□□□□ 0.27
SSBP4-212ENST00000601919 ZC3H12DA2A288 527 aaKnown RBP16.76■□□□□ 0.27
SSBP4-212ENST00000601919 H3BML4 177 aa16.76■□□□□ 0.27
SSBP4-212ENST00000601919 DLGAP1O14490 977 aa16.76■□□□□ 0.27
SSBP4-212ENST00000601919 TFECO14948 347 aaPredicted RBP16.76■□□□□ 0.27
SSBP4-212ENST00000601919 PDGFAP04085 211 aa16.76■□□□□ 0.27
SSBP4-212ENST00000601919 CAPGP40121 348 aa16.76■□□□□ 0.27
SSBP4-212ENST00000601919 RPS6KA3P51812 740 aa16.76■□□□□ 0.27
SSBP4-212ENST00000601919 B3GALT5-AS1P59052 145 aa16.76■□□□□ 0.27
SSBP4-212ENST00000601919 MEX3DQ86XN8 651 aaKnown RBP16.76■□□□□ 0.27
SSBP4-212ENST00000601919 MFSD8Q8NHS3 518 aa16.76■□□□□ 0.27
SSBP4-212ENST00000601919 TEX47Q8TBZ9 253 aa16.76■□□□□ 0.27
SSBP4-212ENST00000601919 TAAR8Q969N4 342 aa16.76■□□□□ 0.27
SSBP4-212ENST00000601919 GPA33Q99795 319 aa16.76■□□□□ 0.27
SSBP4-212ENST00000601919 ASPNQ9BXN1 380 aa16.76■□□□□ 0.27
SSBP4-212ENST00000601919 OR11A1Q9GZK7 315 aa16.76■□□□□ 0.27
SSBP4-212ENST00000601919 FAM118AQ9NWS6 357 aa16.76■□□□□ 0.27
SSBP4-212ENST00000601919 REV1Q9UBZ9 1251 aa16.76■□□□□ 0.27
SSBP4-212ENST00000601919 LRRC42Q9Y546 428 aa16.76■□□□□ 0.27
SSBP4-212ENST00000601919 CORINQ9Y5Q5 1042 aa16.76■□□□□ 0.27
SSBP4-212ENST00000601919 CDH10Q9Y6N8 788 aa16.76■□□□□ 0.27
SSBP4-212ENST00000601919 CDC42EP2O14613 210 aa16.75■□□□□ 0.27
SSBP4-212ENST00000601919 EFNA2O43921 213 aa16.75■□□□□ 0.27
SSBP4-212ENST00000601919 WISP1O95388 367 aa16.75■□□□□ 0.27
SSBP4-212ENST00000601919 PEPDP12955 493 aa16.75■□□□□ 0.27
SSBP4-212ENST00000601919 BMP7P18075 431 aa16.75■□□□□ 0.27
SSBP4-212ENST00000601919 IL11P20809 199 aa16.75■□□□□ 0.27
SSBP4-212ENST00000601919 POU1F1P28069 291 aa16.75■□□□□ 0.27
SSBP4-212ENST00000601919 CRISP1P54107 249 aa16.75■□□□□ 0.27
SSBP4-212ENST00000601919 FOXK1P85037 733 aa16.75■□□□□ 0.27
SSBP4-212ENST00000601919 TMEM176BQ3YBM2 270 aaPredicted RBP16.75■□□□□ 0.27
SSBP4-212ENST00000601919 SLC36A3Q495N2 470 aa16.75■□□□□ 0.27
SSBP4-212ENST00000601919 ZBED5Q49AG3 693 aa16.75■□□□□ 0.27
SSBP4-212ENST00000601919 ZNF620Q6ZNG0 422 aa16.75■□□□□ 0.27
SSBP4-212ENST00000601919 SLC46A3Q7Z3Q1 461 aa16.75■□□□□ 0.27
SSBP4-212ENST00000601919 OR52L1Q8NGH7 329 aa16.75■□□□□ 0.27
SSBP4-212ENST00000601919 OR13C2Q8NGS9 318 aa16.75■□□□□ 0.27
SSBP4-212ENST00000601919 FANK1Q8TC84 345 aa16.75■□□□□ 0.27
SSBP4-212ENST00000601919 TFAP2CQ92754 450 aa16.75■□□□□ 0.27
SSBP4-212ENST00000601919 OR5B2Q96R09 309 aa16.75■□□□□ 0.27
SSBP4-212ENST00000601919 UBL7Q96S82 380 aaPredicted RBP16.75■□□□□ 0.27
SSBP4-212ENST00000601919 MBOAT4Q96T53 435 aa16.75■□□□□ 0.27
SSBP4-212ENST00000601919 PTDSS2Q9BVG9 487 aa16.75■□□□□ 0.27
SSBP4-212ENST00000601919 GRIP2Q9C0E4 1043 aa16.75■□□□□ 0.27
SSBP4-212ENST00000601919 PRORYQ9H606 182 aa16.75■□□□□ 0.27
SSBP4-212ENST00000601919 LDAHQ9H6V9 325 aa16.75■□□□□ 0.27
SSBP4-212ENST00000601919 TMEM185BQ9H7F4 350 aa16.75■□□□□ 0.27
SSBP4-212ENST00000601919 ZDHHC11Q9H8X9 412 aa16.75■□□□□ 0.27
SSBP4-212ENST00000601919 IL20Q9NYY1 176 aa16.75■□□□□ 0.27
SSBP4-212ENST00000601919 TRAPPC4Q9Y296 219 aa16.75■□□□□ 0.27
SSBP4-212ENST00000601919 LOC100130705A0A1B0GUX0 176 aa16.74■□□□□ 0.27
SSBP4-212ENST00000601919 SLC16A6O15403 523 aa16.74■□□□□ 0.27
SSBP4-212ENST00000601919 ACTL6AO96019 429 aa16.74■□□□□ 0.27
SSBP4-212ENST00000601919 CRYABP02511 175 aaKnown RBP16.74■□□□□ 0.27
SSBP4-212ENST00000601919 BGLAPP02818 100 aa16.74■□□□□ 0.27
SSBP4-212ENST00000601919 ASAH2BP0C7U1 165 aa16.74■□□□□ 0.27
SSBP4-212ENST00000601919 ACADSP16219 412 aa16.74■□□□□ 0.27
SSBP4-212ENST00000601919 POU3F2P20265 443 aaPredicted RBP16.74■□□□□ 0.27
SSBP4-212ENST00000601919 SFTPDP35247 375 aa16.74■□□□□ 0.27
SSBP4-212ENST00000601919 GFRA1P56159 465 aa16.74■□□□□ 0.27
SSBP4-212ENST00000601919 PRPS1P60891 318 aa16.74■□□□□ 0.27
SSBP4-212ENST00000601919 MYBPHQ13203 477 aa16.74■□□□□ 0.27
SSBP4-212ENST00000601919 IL18R1Q13478 541 aa16.74■□□□□ 0.27
SSBP4-212ENST00000601919 LINC00303Q3SY05 128 aa16.74■□□□□ 0.27
SSBP4-212ENST00000601919 PDSS1Q5T2R2 415 aa16.74■□□□□ 0.27
SSBP4-212ENST00000601919 C6orf52Q5T4I8 152 aa16.74■□□□□ 0.27
SSBP4-212ENST00000601919 SMARCD3Q6STE5 483 aa16.74■□□□□ 0.27
SSBP4-212ENST00000601919 NANOGNBQ7Z5D8 188 aa16.74■□□□□ 0.27
SSBP4-212ENST00000601919 SCAIQ8N9R8 606 aa16.74■□□□□ 0.27
SSBP4-212ENST00000601919 SLC39A7Q92504 469 aa16.74■□□□□ 0.27
SSBP4-212ENST00000601919 PNPLA2Q96AD5 504 aa16.74■□□□□ 0.27
SSBP4-212ENST00000601919 SLC25A36Q96CQ1 311 aa16.74■□□□□ 0.27
SSBP4-212ENST00000601919 KLHL15Q96M94 604 aa16.74■□□□□ 0.27
SSBP4-212ENST00000601919 MFRPQ9BY79 579 aa16.74■□□□□ 0.27
SSBP4-212ENST00000601919 EXO5Q9H790 373 aa16.74■□□□□ 0.27
SSBP4-212ENST00000601919 TBC1D23Q9NUY8 699 aa16.74■□□□□ 0.27
SSBP4-212ENST00000601919 SIGLEC7Q9Y286 467 aa16.74■□□□□ 0.27
SSBP4-212ENST00000601919 TRGV5A0A0B4J1U4 118 aa16.73■□□□□ 0.27
SSBP4-212ENST00000601919 K7EM74 188 aa16.73■□□□□ 0.27
SSBP4-212ENST00000601919 BCKDKO14874 412 aa16.73■□□□□ 0.27
SSBP4-212ENST00000601919 SOX14O95416 240 aa16.73■□□□□ 0.27
SSBP4-212ENST00000601919 PMS2P2O95744 297 aa16.73■□□□□ 0.27
SSBP4-212ENST00000601919 FAM87AP0C7U9 286 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms