RNA–Protein interactions for RNA: ENST00000601038.5

SCAF1-204, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-204ENST00000601038 PEX5LQ8IYB4 626 aa14.93□□□□□ -0.02
SCAF1-204ENST00000601038 ZNF440Q8IYI8 595 aa14.93□□□□□ -0.02
SCAF1-204ENST00000601038 DEPDC4Q8N2C3 294 aa14.93□□□□□ -0.02
SCAF1-204ENST00000601038 GLB1L3Q8NCI6 653 aaPredicted RBP14.93□□□□□ -0.02
SCAF1-204ENST00000601038 OR52E4Q8NGH9 312 aa14.93□□□□□ -0.02
SCAF1-204ENST00000601038 ADAD1Q96M93 576 aaKnown RBP14.93□□□□□ -0.02
SCAF1-204ENST00000601038 ZBTB18Q99592 522 aa14.93□□□□□ -0.02
SCAF1-204ENST00000601038 WDR55Q9H6Y2 383 aaPredicted RBP14.93□□□□□ -0.02
SCAF1-204ENST00000601038 UPB1Q9UBR1 384 aa14.93□□□□□ -0.02
SCAF1-204ENST00000601038 DCTN4Q9UJW0 460 aa14.93□□□□□ -0.02
SCAF1-204ENST00000601038 POU2F3Q9UKI9 436 aa14.93□□□□□ -0.02
SCAF1-204ENST00000601038 PLCE1Q9P212 2302 aa14.92□□□□□ -0.02
SCAF1-204ENST00000601038 ZC3H12DA2A288 527 aaKnown RBP14.92□□□□□ -0.02
SCAF1-204ENST00000601038 TRPC5OSA6NMA1 111 aa14.92□□□□□ -0.02
SCAF1-204ENST00000601038 HDAC3O15379 428 aa14.92□□□□□ -0.02
SCAF1-204ENST00000601038 CD5LO43866 347 aa14.92□□□□□ -0.02
SCAF1-204ENST00000601038 SSX4O60224 188 aa14.92□□□□□ -0.02
SCAF1-204ENST00000601038 EPHA3P29320 983 aa14.92□□□□□ -0.02
SCAF1-204ENST00000601038 IRX1P78414 480 aaPredicted RBP14.92□□□□□ -0.02
SCAF1-204ENST00000601038 C11orf71Q6IPW1 123 aa14.92□□□□□ -0.02
SCAF1-204ENST00000601038 FBXL14Q8N1E6 418 aa14.92□□□□□ -0.02
SCAF1-204ENST00000601038 C17orf78Q8N4C9 275 aa14.92□□□□□ -0.02
SCAF1-204ENST00000601038 WDR31Q8NA23 367 aa14.92□□□□□ -0.02
SCAF1-204ENST00000601038 C1orf162Q8NEQ5 155 aaPredicted RBP14.92□□□□□ -0.02
SCAF1-204ENST00000601038 PNPT1Q8TCS8 783 aaKnown RBP14.92□□□□□ -0.02
SCAF1-204ENST00000601038 RHNO1Q9BSD3 238 aa14.92□□□□□ -0.02
SCAF1-204ENST00000601038 CACNG6Q9BXT2 260 aa14.92□□□□□ -0.02
SCAF1-204ENST00000601038 SLC7A10Q9NS82 523 aa14.92□□□□□ -0.02
SCAF1-204ENST00000601038 THAP1Q9NVV9 213 aa14.92□□□□□ -0.02
SCAF1-204ENST00000601038 RAB21Q9UL25 225 aa14.92□□□□□ -0.02
SCAF1-204ENST00000601038 CDHR4A6H8M9 788 aa14.91□□□□□ -0.02
SCAF1-204ENST00000601038 M0R1B8 84 aa14.91□□□□□ -0.02
SCAF1-204ENST00000601038 RFXANKO14593 260 aa14.91□□□□□ -0.02
SCAF1-204ENST00000601038 IL6P05231 212 aa14.91□□□□□ -0.02
SCAF1-204ENST00000601038 WDR4P57081 412 aaKnown RBP14.91□□□□□ -0.02
SCAF1-204ENST00000601038 TGFBR3Q03167 851 aa14.91□□□□□ -0.02
SCAF1-204ENST00000601038 SPOCK1Q08629 439 aa14.91□□□□□ -0.02
SCAF1-204ENST00000601038 MAPK11Q15759 364 aa14.91□□□□□ -0.02
SCAF1-204ENST00000601038 MUC15Q8N387 334 aa14.91□□□□□ -0.02
SCAF1-204ENST00000601038 ANKRD42Q8N9B4 389 aa14.91□□□□□ -0.02
SCAF1-204ENST00000601038 OR10H5Q8NGA6 315 aa14.91□□□□□ -0.02
SCAF1-204ENST00000601038 TMEM45BQ96B21 275 aa14.91□□□□□ -0.02
SCAF1-204ENST00000601038 SF3B5Q9BWJ5 86 aaKnown RBP14.91□□□□□ -0.02
SCAF1-204ENST00000601038 C1QTNF6Q9BXI9 259 aa14.91□□□□□ -0.02
SCAF1-204ENST00000601038 HEATR1Q9H583 2144 aaKnown RBP14.91□□□□□ -0.02
SCAF1-204ENST00000601038 PIF1Q9H611 641 aa14.91□□□□□ -0.02
SCAF1-204ENST00000601038 SLC17A5Q9NRA2 495 aa14.91□□□□□ -0.02
SCAF1-204ENST00000601038 RLIMQ9NVW2 624 aa14.91□□□□□ -0.02
SCAF1-204ENST00000601038 CALML5Q9NZT1 146 aa14.91□□□□□ -0.02
SCAF1-204ENST00000601038 AMDHD2Q9Y303 409 aa14.91□□□□□ -0.02
SCAF1-204ENST00000601038 SONP18583 2426 aaKnown RBP14.91□□□□□ -0.02
SCAF1-204ENST00000601038 RTTNQ86VV8 2226 aa14.9□□□□□ -0.02
SCAF1-204ENST00000601038 LIPT2A6NK58 231 aa14.9□□□□□ -0.02
SCAF1-204ENST00000601038 SLCO1B7G3V0H7 640 aa14.9□□□□□ -0.02
SCAF1-204ENST00000601038 SNNO75324 88 aaPredicted RBP14.9□□□□□ -0.02
SCAF1-204ENST00000601038 GPIP06744 558 aa14.9□□□□□ -0.02
SCAF1-204ENST00000601038 IDO1P14902 403 aa14.9□□□□□ -0.02
SCAF1-204ENST00000601038 CXCR1P25024 350 aa14.9□□□□□ -0.02
SCAF1-204ENST00000601038 ACAA2P42765 397 aaKnown RBP14.9□□□□□ -0.02
SCAF1-204ENST00000601038 FABP6P51161 128 aa14.9□□□□□ -0.02
SCAF1-204ENST00000601038 NUDT6P53370 316 aa14.9□□□□□ -0.02
SCAF1-204ENST00000601038 MVDP53602 400 aa14.9□□□□□ -0.02
SCAF1-204ENST00000601038 DSCR9P59020 149 aa14.9□□□□□ -0.02
SCAF1-204ENST00000601038 CEACAM7Q14002 265 aa14.9□□□□□ -0.02
SCAF1-204ENST00000601038 RAB35Q15286 201 aa14.9□□□□□ -0.02
SCAF1-204ENST00000601038 OTUD3Q5T2D3 398 aaPredicted RBP14.9□□□□□ -0.02
SCAF1-204ENST00000601038 TSPO2Q5TGU0 170 aa14.9□□□□□ -0.02
SCAF1-204ENST00000601038 C9orf135Q5VTT2 229 aa14.9□□□□□ -0.02
SCAF1-204ENST00000601038 ZNF544Q6NX49 715 aa14.9□□□□□ -0.02
SCAF1-204ENST00000601038 B3GLCTQ6Y288 498 aa14.9□□□□□ -0.02
SCAF1-204ENST00000601038 TMEM99Q8N816 258 aa14.9□□□□□ -0.02
SCAF1-204ENST00000601038 ZIC4Q8N9L1 334 aa14.9□□□□□ -0.02
SCAF1-204ENST00000601038 OR52P1PQ8NH57 321 aa14.9□□□□□ -0.02
SCAF1-204ENST00000601038 ZBTB9Q96C00 473 aa14.9□□□□□ -0.02
SCAF1-204ENST00000601038 FKRPQ9H9S5 495 aa14.9□□□□□ -0.02
SCAF1-204ENST00000601038 SLC6A13Q9NSD5 602 aa14.9□□□□□ -0.02
SCAF1-204ENST00000601038 P2RX2Q9UBL9 471 aa14.9□□□□□ -0.02
SCAF1-204ENST00000601038 DSPPQ9NZW4 1301 aa14.9□□□□□ -0.02
SCAF1-204ENST00000601038 IGHV4-30-2A0A087WSY4 118 aa14.89□□□□□ -0.03
SCAF1-204ENST00000601038 SLC22A3O75751 556 aa14.89□□□□□ -0.03
SCAF1-204ENST00000601038 AKR7A3O95154 331 aa14.89□□□□□ -0.03
SCAF1-204ENST00000601038 TFPTP0C1Z6 253 aa14.89□□□□□ -0.03
SCAF1-204ENST00000601038 GKN3PP0CG01 181 aa14.89□□□□□ -0.03
SCAF1-204ENST00000601038 ZCCHC18P0CG32 403 aa14.89□□□□□ -0.03
SCAF1-204ENST00000601038 MPGP29372 298 aa14.89□□□□□ -0.03
SCAF1-204ENST00000601038 CRISP3P54108 245 aa14.89□□□□□ -0.03
SCAF1-204ENST00000601038 PRPS1P60891 318 aa14.89□□□□□ -0.03
SCAF1-204ENST00000601038 OR7A5Q15622 319 aa14.89□□□□□ -0.03
SCAF1-204ENST00000601038 LIN52Q52LA3 116 aa14.89□□□□□ -0.03
SCAF1-204ENST00000601038 PDCD4Q53EL6 469 aaKnown RBP14.89□□□□□ -0.03
SCAF1-204ENST00000601038 WBP2NLQ6ICG8 309 aa14.89□□□□□ -0.03
SCAF1-204ENST00000601038 CXXC5Q7LFL8 322 aaKnown RBP14.89□□□□□ -0.03
SCAF1-204ENST00000601038 AAED1Q7RTV5 226 aa14.89□□□□□ -0.03
SCAF1-204ENST00000601038 LSRQ86X29 649 aaPredicted RBP14.89□□□□□ -0.03
SCAF1-204ENST00000601038 VRK2Q86Y07 508 aa14.89□□□□□ -0.03
SCAF1-204ENST00000601038 POMGNT2Q8NAT1 580 aa14.89□□□□□ -0.03
SCAF1-204ENST00000601038 OR9K2Q8NGE7 335 aa14.89□□□□□ -0.03
SCAF1-204ENST00000601038 SPATA3Q8NHX4 192 aa14.89□□□□□ -0.03
SCAF1-204ENST00000601038 BOD1Q96IK1 185 aa14.89□□□□□ -0.03
SCAF1-204ENST00000601038 MAELQ96JY0 434 aaKnown RBP14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms