RNA–Protein interactions for RNA: ENST00000600970.5

USE1-208, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 5

Gene USE1, Length 826 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-208ENST00000600970 OR51I1Q9H343 314 aa14.56□□□□□ -0.08
USE1-208ENST00000600970 OCEL1Q9H607 264 aa14.56□□□□□ -0.08
USE1-208ENST00000600970 OBP2BQ9NPH6 170 aa14.56□□□□□ -0.08
USE1-208ENST00000600970 EXOSC3Q9NQT5 275 aaKnown RBP14.56□□□□□ -0.08
USE1-208ENST00000600970 EXD2Q9NVH0 621 aa14.56□□□□□ -0.08
USE1-208ENST00000600970 PCDHGB4Q9UN71 923 aa14.56□□□□□ -0.08
USE1-208ENST00000600970 TMED7Q9Y3B3 224 aa14.56□□□□□ -0.08
USE1-208ENST00000600970 WDR45Q9Y484 360 aa14.56□□□□□ -0.08
USE1-208ENST00000600970 A0A0A6YYJ9 748 aa14.55□□□□□ -0.08
USE1-208ENST00000600970 RNF103-CHMP3A0A140T963 221 aa14.55□□□□□ -0.08
USE1-208ENST00000600970 TMEM72A0PK05 275 aa14.55□□□□□ -0.08
USE1-208ENST00000600970 SLCO1B7G3V0H7 640 aa14.55□□□□□ -0.08
USE1-208ENST00000600970 ZNF208O43345 1280 aa14.55□□□□□ -0.08
USE1-208ENST00000600970 KCNAB3O43448 404 aa14.55□□□□□ -0.08
USE1-208ENST00000600970 TRIM13O60858 407 aa14.55□□□□□ -0.08
USE1-208ENST00000600970 SNUPNO95149 360 aaKnown RBP14.55□□□□□ -0.08
USE1-208ENST00000600970 EGR1P18146 543 aa14.55□□□□□ -0.08
USE1-208ENST00000600970 PRPS1L1P21108 318 aa14.55□□□□□ -0.08
USE1-208ENST00000600970 CALCRP30988 508 aa14.55□□□□□ -0.08
USE1-208ENST00000600970 NAAAQ02083 359 aa14.55□□□□□ -0.08
USE1-208ENST00000600970 TRIP10Q15642 601 aa14.55□□□□□ -0.08
USE1-208ENST00000600970 ATP6AP1LQ52LC2 224 aa14.55□□□□□ -0.08
USE1-208ENST00000600970 IL23RQ5VWK5 629 aa14.55□□□□□ -0.08
USE1-208ENST00000600970 ANKRD16Q6P6B7 361 aa14.55□□□□□ -0.08
USE1-208ENST00000600970 PAQR6Q6TCH4 344 aa14.55□□□□□ -0.08
USE1-208ENST00000600970 RINLQ6ZS11 566 aa14.55□□□□□ -0.08
USE1-208ENST00000600970 AAED1Q7RTV5 226 aa14.55□□□□□ -0.08
USE1-208ENST00000600970 HMGN2P46Q86SG4 172 aa14.55□□□□□ -0.08
USE1-208ENST00000600970 HOMEZQ8IX15 550 aa14.55□□□□□ -0.08
USE1-208ENST00000600970 ZCCHC24Q8N2G6 241 aaKnown RBP14.55□□□□□ -0.08
USE1-208ENST00000600970 ARFGAP2Q8N6H7 521 aa14.55□□□□□ -0.08
USE1-208ENST00000600970 OR1K1Q8NGR3 316 aa14.55□□□□□ -0.08
USE1-208ENST00000600970 ZFAND2BQ8WV99 257 aa14.55□□□□□ -0.08
USE1-208ENST00000600970 NEU4Q8WWR8 484 aaPredicted RBP14.55□□□□□ -0.08
USE1-208ENST00000600970 PMM1Q92871 262 aa14.55□□□□□ -0.08
USE1-208ENST00000600970 ZG16BQ96DA0 208 aa14.55□□□□□ -0.08
USE1-208ENST00000600970 AURKBQ96GD4 344 aaPredicted RBP14.55□□□□□ -0.08
USE1-208ENST00000600970 C3orf30Q96M34 536 aa14.55□□□□□ -0.08
USE1-208ENST00000600970 SAP130Q9H0E3 1048 aa14.55□□□□□ -0.08
USE1-208ENST00000600970 TMEM45AQ9NWC5 275 aa14.55□□□□□ -0.08
USE1-208ENST00000600970 CRNNQ9UBG3 495 aaPredicted RBP14.55□□□□□ -0.08
USE1-208ENST00000600970 OSGIN1Q9UJX0 560 aa14.55□□□□□ -0.08
USE1-208ENST00000600970 ZC3H12DA2A288 527 aaKnown RBP14.54□□□□□ -0.08
USE1-208ENST00000600970 CLDN24A6NM45 220 aa14.54□□□□□ -0.08
USE1-208ENST00000600970 hCG_2039718K7EN88 272 aa14.54□□□□□ -0.08
USE1-208ENST00000600970 COPEO14579 308 aa14.54□□□□□ -0.08
USE1-208ENST00000600970 AP3D1O14617 1153 aa14.54□□□□□ -0.08
USE1-208ENST00000600970 LGI1O95970 557 aa14.54□□□□□ -0.08
USE1-208ENST00000600970 GUSBP08236 651 aa14.54□□□□□ -0.08
USE1-208ENST00000600970 CECR9P0C854 216 aa14.54□□□□□ -0.08
USE1-208ENST00000600970 OR12D1P0DN82 309 aa14.54□□□□□ -0.08
USE1-208ENST00000600970 PAX7P23759 505 aa14.54□□□□□ -0.08
USE1-208ENST00000600970 HTR3AP46098 478 aa14.54□□□□□ -0.08
USE1-208ENST00000600970 POLR2HP52434 150 aaKnown RBP14.54□□□□□ -0.08
USE1-208ENST00000600970 DVL1P1P54792 670 aaPredicted RBP14.54□□□□□ -0.08
USE1-208ENST00000600970 KCNJ10P78508 379 aa14.54□□□□□ -0.08
USE1-208ENST00000600970 FUT5Q11128 374 aa14.54□□□□□ -0.08
USE1-208ENST00000600970 RIN1Q13671 783 aa14.54□□□□□ -0.08
USE1-208ENST00000600970 FAM153CQ494X1 144 aa14.54□□□□□ -0.08
USE1-208ENST00000600970 C6orf136Q5SQH8 315 aa14.54□□□□□ -0.08
USE1-208ENST00000600970 OTUD3Q5T2D3 398 aaPredicted RBP14.54□□□□□ -0.08
USE1-208ENST00000600970 DEF8Q6ZN54 512 aa14.54□□□□□ -0.08
USE1-208ENST00000600970 FRRS1Q6ZNA5 592 aa14.54□□□□□ -0.08
USE1-208ENST00000600970 ABHD12BQ7Z5M8 362 aaPredicted RBP14.54□□□□□ -0.08
USE1-208ENST00000600970 ZNF786Q8N393 782 aa14.54□□□□□ -0.08
USE1-208ENST00000600970 TMEM99Q8N816 258 aa14.54□□□□□ -0.08
USE1-208ENST00000600970 FNDC5Q8NAU1 212 aa14.54□□□□□ -0.08
USE1-208ENST00000600970 OR9K2Q8NGE7 335 aa14.54□□□□□ -0.08
USE1-208ENST00000600970 AGR3Q8TD06 166 aa14.54□□□□□ -0.08
USE1-208ENST00000600970 MIPOL1Q8TD10 442 aa14.54□□□□□ -0.08
USE1-208ENST00000600970 XAGE5Q8WWM1 108 aa14.54□□□□□ -0.08
USE1-208ENST00000600970 RAB8BQ92930 207 aa14.54□□□□□ -0.08
USE1-208ENST00000600970 DOK1Q99704 481 aa14.54□□□□□ -0.08
USE1-208ENST00000600970 TXLNGYQ9BZA5 131 aa14.54□□□□□ -0.08
USE1-208ENST00000600970 SEC61A2Q9H9S3 476 aa14.54□□□□□ -0.08
USE1-208ENST00000600970 POLE3Q9NRF9 147 aa14.54□□□□□ -0.08
USE1-208ENST00000600970 ST6GALNAC1Q9NSC7 600 aaPredicted RBP14.54□□□□□ -0.08
USE1-208ENST00000600970 MID2Q9UJV3 735 aa14.54□□□□□ -0.08
USE1-208ENST00000600970 FBXO9Q9UK97 447 aaPredicted RBP14.54□□□□□ -0.08
USE1-208ENST00000600970 NR5A2O00482 541 aa14.53□□□□□ -0.08
USE1-208ENST00000600970 SKAP2O75563 359 aaPredicted RBP14.53□□□□□ -0.08
USE1-208ENST00000600970 AGR2O95994 175 aa14.53□□□□□ -0.08
USE1-208ENST00000600970 IGLV1-44P01699 117 aa14.53□□□□□ -0.08
USE1-208ENST00000600970 IGFBP1P08833 259 aaPredicted RBP14.53□□□□□ -0.08
USE1-208ENST00000600970 FAM153BP0C7A2 387 aa14.53□□□□□ -0.08
USE1-208ENST00000600970 SLC1A3P43003 542 aa14.53□□□□□ -0.08
USE1-208ENST00000600970 UBE2NP61088 152 aaKnown RBP14.53□□□□□ -0.08
USE1-208ENST00000600970 TUBA1BP68363 451 aa14.53□□□□□ -0.08
USE1-208ENST00000600970 TUBA4AP68366 448 aa14.53□□□□□ -0.08
USE1-208ENST00000600970 LGALS3BPQ08380 585 aa14.53□□□□□ -0.08
USE1-208ENST00000600970 PGS1Q32NB8 556 aa14.53□□□□□ -0.08
USE1-208ENST00000600970 C3orf36Q3SXR2 165 aa14.53□□□□□ -0.08
USE1-208ENST00000600970 ATAD3BQ5T9A4 648 aa14.53□□□□□ -0.08
USE1-208ENST00000600970 OR4F3Q6IEY1 312 aa14.53□□□□□ -0.08
USE1-208ENST00000600970 UGT2A3Q6UWM9 527 aa14.53□□□□□ -0.08
USE1-208ENST00000600970 TUBA1AQ71U36 451 aa14.53□□□□□ -0.08
USE1-208ENST00000600970 OR4F15Q8NGB8 312 aa14.53□□□□□ -0.08
USE1-208ENST00000600970 CNOT9Q92600 299 aaKnown RBP14.53□□□□□ -0.08
USE1-208ENST00000600970 BCL2L2Q92843 193 aaPredicted RBP14.53□□□□□ -0.08
USE1-208ENST00000600970 ROPN1LQ96C74 230 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms