RNA–Protein interactions for RNA: ENST00000597453.1

TGFB1-202, Transcript of transforming growth factor beta 1, humanhuman

TSL 1 (best)

Gene TGFB1, Length 392 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-202ENST00000597453 GNA13Q14344 377 aa13.39□□□□□ -0.27
TGFB1-202ENST00000597453 MAPK11Q15759 364 aa13.39□□□□□ -0.27
TGFB1-202ENST00000597453 ZNF672Q499Z4 452 aaPredicted RBP13.39□□□□□ -0.27
TGFB1-202ENST00000597453 DLEU7Q6UYE1 221 aa13.39□□□□□ -0.27
TGFB1-202ENST00000597453 PRIMA1Q86XR5 153 aa13.39□□□□□ -0.27
TGFB1-202ENST00000597453 ZNF563Q8TA94 476 aa13.39□□□□□ -0.27
TGFB1-202ENST00000597453 SMAP2Q8WU79 429 aaPredicted RBP13.39□□□□□ -0.27
TGFB1-202ENST00000597453 SLC25A43Q8WUT9 341 aaPredicted RBP13.39□□□□□ -0.27
TGFB1-202ENST00000597453 NPAP1Q9NZP6 1156 aa13.39□□□□□ -0.27
TGFB1-202ENST00000597453 CHRNA9Q9UGM1 479 aa13.39□□□□□ -0.27
TGFB1-202ENST00000597453 CORO2BQ9UQ03 480 aa13.39□□□□□ -0.27
TGFB1-202ENST00000597453 SLC35A3Q9Y2D2 325 aa13.39□□□□□ -0.27
TGFB1-202ENST00000597453 MAGED1Q9Y5V3 778 aaPredicted RBP13.39□□□□□ -0.27
TGFB1-202ENST00000597453 IGKV3D-15A0A087WSY6 115 aa13.38□□□□□ -0.27
TGFB1-202ENST00000597453 TMEM247A6NEH6 219 aa13.38□□□□□ -0.27
TGFB1-202ENST00000597453 AGAP5A6NIR3 686 aa13.38□□□□□ -0.27
TGFB1-202ENST00000597453 ZNF716A6NP11 495 aa13.38□□□□□ -0.27
TGFB1-202ENST00000597453 SLC22A2O15244 555 aa13.38□□□□□ -0.27
TGFB1-202ENST00000597453 RAMP1O60894 148 aa13.38□□□□□ -0.27
TGFB1-202ENST00000597453 IGHV3-9P01782 118 aa13.38□□□□□ -0.27
TGFB1-202ENST00000597453 TFPIP10646 304 aa13.38□□□□□ -0.27
TGFB1-202ENST00000597453 RPS4Y1P22090 263 aaKnown RBP13.38□□□□□ -0.27
TGFB1-202ENST00000597453 LSP1P33241 339 aa13.38□□□□□ -0.27
TGFB1-202ENST00000597453 APOBEC1P41238 236 aaKnown RBP13.38□□□□□ -0.27
TGFB1-202ENST00000597453 CRISP3P54108 245 aa13.38□□□□□ -0.27
TGFB1-202ENST00000597453 CSNK2A1P68400 391 aaPredicted RBP13.38□□□□□ -0.27
TGFB1-202ENST00000597453 KLF10Q13118 480 aa13.38□□□□□ -0.27
TGFB1-202ENST00000597453 TNK1Q13470 666 aa13.38□□□□□ -0.27
TGFB1-202ENST00000597453 GRINAQ7Z429 371 aa13.38□□□□□ -0.27
TGFB1-202ENST00000597453 GALNT5Q7Z7M9 940 aa13.38□□□□□ -0.27
TGFB1-202ENST00000597453 DHDDSQ86SQ9 333 aa13.38□□□□□ -0.27
TGFB1-202ENST00000597453 MTDHQ86UE4 582 aaKnown RBP13.38□□□□□ -0.27
TGFB1-202ENST00000597453 RETREG3Q86VR2 466 aa13.38□□□□□ -0.27
TGFB1-202ENST00000597453 CMIPQ8IY22 773 aa13.38□□□□□ -0.27
TGFB1-202ENST00000597453 ZNF100Q8IYN0 542 aa13.38□□□□□ -0.27
TGFB1-202ENST00000597453 SLC38A5Q8WUX1 472 aa13.38□□□□□ -0.27
TGFB1-202ENST00000597453 ARL5BQ96KC2 179 aa13.38□□□□□ -0.27
TGFB1-202ENST00000597453 USB1Q9BQ65 265 aaKnown RBP13.38□□□□□ -0.27
TGFB1-202ENST00000597453 CPPED1Q9BRF8 314 aaPredicted RBP13.38□□□□□ -0.27
TGFB1-202ENST00000597453 TRIM2Q9C040 744 aa13.38□□□□□ -0.27
TGFB1-202ENST00000597453 OR11A1Q9GZK7 315 aa13.38□□□□□ -0.27
TGFB1-202ENST00000597453 NSRP1Q9H0G5 558 aaKnown RBP13.38□□□□□ -0.27
TGFB1-202ENST00000597453 MTHFD2LQ9H903 347 aaPredicted RBP13.38□□□□□ -0.27
TGFB1-202ENST00000597453 A4GALTQ9NPC4 353 aa13.38□□□□□ -0.27
TGFB1-202ENST00000597453 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.38□□□□□ -0.27
TGFB1-202ENST00000597453 ABCA1O95477 2261 aa13.37□□□□□ -0.27
TGFB1-202ENST00000597453 BBIP1A8MTZ0 92 aa13.37□□□□□ -0.27
TGFB1-202ENST00000597453 AP3D1O14617 1153 aa13.37□□□□□ -0.27
TGFB1-202ENST00000597453 SHOX2O60902 331 aaPredicted RBP13.37□□□□□ -0.27
TGFB1-202ENST00000597453 GPX2P18283 190 aa13.37□□□□□ -0.27
TGFB1-202ENST00000597453 CCNA2P20248 432 aa13.37□□□□□ -0.27
TGFB1-202ENST00000597453 NTF4P34130 210 aa13.37□□□□□ -0.27
TGFB1-202ENST00000597453 SEC24CP53992 1094 aa13.37□□□□□ -0.27
TGFB1-202ENST00000597453 KCNJ10P78508 379 aa13.37□□□□□ -0.27
TGFB1-202ENST00000597453 KRTAP1-1Q07627 177 aa13.37□□□□□ -0.27
TGFB1-202ENST00000597453 NFYCQ13952 458 aa13.37□□□□□ -0.27
TGFB1-202ENST00000597453 PPA1Q15181 289 aa13.37□□□□□ -0.27
TGFB1-202ENST00000597453 MAPRE2Q15555 327 aa13.37□□□□□ -0.27
TGFB1-202ENST00000597453 CLEC12BQ2HXU8 276 aa13.37□□□□□ -0.27
TGFB1-202ENST00000597453 PGGHGQ32M88 737 aa13.37□□□□□ -0.27
TGFB1-202ENST00000597453 COQ5Q5HYK3 327 aa13.37□□□□□ -0.27
TGFB1-202ENST00000597453 PRAMEF8Q5VWM4 474 aa13.37□□□□□ -0.27
TGFB1-202ENST00000597453 PRAMEF7Q5VXH5 474 aa13.37□□□□□ -0.27
TGFB1-202ENST00000597453 SPATA21Q7Z572 469 aa13.37□□□□□ -0.27
TGFB1-202ENST00000597453 ADGRG3Q86Y34 549 aa13.37□□□□□ -0.27
TGFB1-202ENST00000597453 PEX5LQ8IYB4 626 aa13.37□□□□□ -0.27
TGFB1-202ENST00000597453 ZNF433Q8N7K0 673 aaPredicted RBP13.37□□□□□ -0.27
TGFB1-202ENST00000597453 CNOT9Q92600 299 aaKnown RBP13.37□□□□□ -0.27
TGFB1-202ENST00000597453 TMEM19Q96HH6 336 aa13.37□□□□□ -0.27
TGFB1-202ENST00000597453 IKZF5Q9H5V7 419 aa13.37□□□□□ -0.27
TGFB1-202ENST00000597453 EXOSC3Q9NQT5 275 aaKnown RBP13.37□□□□□ -0.27
TGFB1-202ENST00000597453 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.37□□□□□ -0.27
TGFB1-202ENST00000597453 SPIN1Q9Y657 262 aaPredicted RBP13.37□□□□□ -0.27
TGFB1-202ENST00000597453 ALPK2Q86TB3 2170 aa13.37□□□□□ -0.27
TGFB1-202ENST00000597453 KIAA1324LA8MWY0 1029 aaPredicted RBP13.36□□□□□ -0.27
TGFB1-202ENST00000597453 EVPLLA8MZ36 301 aa13.36□□□□□ -0.27
TGFB1-202ENST00000597453 SHISA9B4DS77 424 aa13.36□□□□□ -0.27
TGFB1-202ENST00000597453 FBP2O00757 339 aa13.36□□□□□ -0.27
TGFB1-202ENST00000597453 RAD51DO75771 328 aa13.36□□□□□ -0.27
TGFB1-202ENST00000597453 PGM3O95394 542 aa13.36□□□□□ -0.27
TGFB1-202ENST00000597453 PMS2P2O95744 297 aa13.36□□□□□ -0.27
TGFB1-202ENST00000597453 DBIP07108 87 aaKnown RBP13.36□□□□□ -0.27
TGFB1-202ENST00000597453 NUDT7P0C024 238 aa13.36□□□□□ -0.27
TGFB1-202ENST00000597453 GGT1P19440 569 aa13.36□□□□□ -0.27
TGFB1-202ENST00000597453 IDH2P48735 452 aaKnown RBP13.36□□□□□ -0.27
TGFB1-202ENST00000597453 FAPQ12884 760 aa13.36□□□□□ -0.27
TGFB1-202ENST00000597453 VEZF1Q14119 521 aa13.36□□□□□ -0.27
TGFB1-202ENST00000597453 PDK3Q15120 406 aa13.36□□□□□ -0.27
TGFB1-202ENST00000597453 RUNDC3AQ59EK9 446 aa13.36□□□□□ -0.27
TGFB1-202ENST00000597453 TIMM23BQ5SRD1 257 aa13.36□□□□□ -0.27
TGFB1-202ENST00000597453 GCNT6Q5T4J0 391 aa13.36□□□□□ -0.27
TGFB1-202ENST00000597453 CCDC103Q8IW40 242 aa13.36□□□□□ -0.27
TGFB1-202ENST00000597453 C10orf111Q8N326 155 aa13.36□□□□□ -0.27
TGFB1-202ENST00000597453 MAPK1IP1LQ8NDC0 245 aa13.36□□□□□ -0.27
TGFB1-202ENST00000597453 WDR60Q8WVS4 1066 aa13.36□□□□□ -0.27
TGFB1-202ENST00000597453 GTPBP3Q969Y2 492 aaKnown RBP13.36□□□□□ -0.27
TGFB1-202ENST00000597453 ANKRD27Q96NW4 1050 aa13.36□□□□□ -0.27
TGFB1-202ENST00000597453 CGREF1Q99674 301 aa13.36□□□□□ -0.27
TGFB1-202ENST00000597453 ELAC2Q9BQ52 826 aaKnown RBP13.36□□□□□ -0.27
TGFB1-202ENST00000597453 BCL2L10Q9HD36 194 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms