RNA–Protein interactions for RNA: ENST00000597023.1

PPFIA4-208, Transcript of PTPRF interacting protein alpha 4, human

TSL 4

Gene PPFIA4, Length 496 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPFIA4-208	ENST00000597023	HOXB4	P17483	251 aa	Predicted RBP	13.73	□□□□□ -0.21
PPFIA4-208	ENST00000597023	NCF2	P19878	526 aa	Predicted RBP	13.73	□□□□□ -0.21
PPFIA4-208	ENST00000597023	COX5A	P20674	150 aa		13.73	□□□□□ -0.21
PPFIA4-208	ENST00000597023	H3F3A	P84243	136 aa		13.73	□□□□□ -0.21
PPFIA4-208	ENST00000597023	LARS2	Q15031	903 aa	Known RBP	13.73	□□□□□ -0.21
PPFIA4-208	ENST00000597023	ZNF311	Q5JNZ3	666 aa		13.73	□□□□□ -0.21
PPFIA4-208	ENST00000597023	CASP12	Q6UXS9	341 aa		13.73	□□□□□ -0.21
PPFIA4-208	ENST00000597023	MSRB3	Q8IXL7	192 aa		13.73	□□□□□ -0.21
PPFIA4-208	ENST00000597023	ZNF440	Q8IYI8	595 aa		13.73	□□□□□ -0.21
PPFIA4-208	ENST00000597023	C10orf111	Q8N326	155 aa		13.73	□□□□□ -0.21
PPFIA4-208	ENST00000597023	TMEM99	Q8N816	258 aa		13.73	□□□□□ -0.21
PPFIA4-208	ENST00000597023	MUCL1	Q96DR8	90 aa		13.73	□□□□□ -0.21
PPFIA4-208	ENST00000597023	NAA11	Q9BSU3	229 aa	Predicted RBP	13.73	□□□□□ -0.21
PPFIA4-208	ENST00000597023	C1QTNF6	Q9BXI9	259 aa		13.73	□□□□□ -0.21
PPFIA4-208	ENST00000597023	RAD21L1	Q9H4I0	556 aa		13.73	□□□□□ -0.21
PPFIA4-208	ENST00000597023	ARMC7	Q9H6L4	198 aa		13.73	□□□□□ -0.21
PPFIA4-208	ENST00000597023	ZNF232	Q9UNY5	417 aa		13.73	□□□□□ -0.21
PPFIA4-208	ENST00000597023	ACAN	P16112	2415 aa		13.73	□□□□□ -0.21
PPFIA4-208	ENST00000597023	MAP1A	P78559	2803 aa	Predicted RBP	13.72	□□□□□ -0.21
PPFIA4-208	ENST00000597023		A0A096LPI6	279 aa		13.72	□□□□□ -0.21
PPFIA4-208	ENST00000597023	GPR171	O14626	319 aa		13.72	□□□□□ -0.21
PPFIA4-208	ENST00000597023	PTN	P21246	168 aa		13.72	□□□□□ -0.21
PPFIA4-208	ENST00000597023	IDUA	P35475	653 aa		13.72	□□□□□ -0.21
PPFIA4-208	ENST00000597023	SLC16A1	P53985	500 aa		13.72	□□□□□ -0.21
PPFIA4-208	ENST00000597023	COPZ1	P61923	177 aa		13.72	□□□□□ -0.21
PPFIA4-208	ENST00000597023	AGK	Q53H12	422 aa		13.72	□□□□□ -0.21
PPFIA4-208	ENST00000597023	TIMM23B	Q5SRD1	257 aa		13.72	□□□□□ -0.21
PPFIA4-208	ENST00000597023	OTUD3	Q5T2D3	398 aa	Predicted RBP	13.72	□□□□□ -0.21
PPFIA4-208	ENST00000597023	WBP2NL	Q6ICG8	309 aa		13.72	□□□□□ -0.21
PPFIA4-208	ENST00000597023	BLOC1S3	Q6QNY0	202 aa		13.72	□□□□□ -0.21
PPFIA4-208	ENST00000597023	CLEC9A	Q6UXN8	241 aa		13.72	□□□□□ -0.21
PPFIA4-208	ENST00000597023	BIVM	Q86UB2	503 aa		13.72	□□□□□ -0.21
PPFIA4-208	ENST00000597023	SPDL1	Q96EA4	605 aa		13.72	□□□□□ -0.21
PPFIA4-208	ENST00000597023	CCDC28B	Q9BUN5	200 aa		13.72	□□□□□ -0.21
PPFIA4-208	ENST00000597023	SPATA9	Q9BWV2	254 aa		13.72	□□□□□ -0.21
PPFIA4-208	ENST00000597023	RSPO3	Q9BXY4	272 aa	Predicted RBP	13.72	□□□□□ -0.21
PPFIA4-208	ENST00000597023	GSX2	Q9BZM3	304 aa		13.72	□□□□□ -0.21
PPFIA4-208	ENST00000597023	RABEP2	Q9H5N1	569 aa		13.72	□□□□□ -0.21
PPFIA4-208	ENST00000597023	CXorf56	Q9H5V9	222 aa		13.72	□□□□□ -0.21
PPFIA4-208	ENST00000597023	SLC52A3	Q9NQ40	469 aa		13.72	□□□□□ -0.21
PPFIA4-208	ENST00000597023	MRGBP	Q9NV56	204 aa		13.72	□□□□□ -0.21
PPFIA4-208	ENST00000597023	ADPRHL2	Q9NX46	363 aa		13.72	□□□□□ -0.21
PPFIA4-208	ENST00000597023	FLVCR1	Q9Y5Y0	555 aa		13.72	□□□□□ -0.21
PPFIA4-208	ENST00000597023	DSCAM	O60469	2012 aa		13.71	□□□□□ -0.21
PPFIA4-208	ENST00000597023	RAI1	Q7Z5J4	1906 aa	Predicted RBP	13.71	□□□□□ -0.21
PPFIA4-208	ENST00000597023	LIPT2	A6NK58	231 aa		13.71	□□□□□ -0.21
PPFIA4-208	ENST00000597023	OR5H1	A6NKK0	313 aa		13.71	□□□□□ -0.21
PPFIA4-208	ENST00000597023	C5orf58	C9J3I9	102 aa		13.71	□□□□□ -0.21
PPFIA4-208	ENST00000597023	DNPH1	O43598	174 aa		13.71	□□□□□ -0.21
PPFIA4-208	ENST00000597023	EIF1B	O60739	113 aa	Known RBP	13.71	□□□□□ -0.21
PPFIA4-208	ENST00000597023	PGM3	O95394	542 aa		13.71	□□□□□ -0.21
PPFIA4-208	ENST00000597023	LY6G6D	O95868	133 aa		13.71	□□□□□ -0.21
PPFIA4-208	ENST00000597023	GPI	P06744	558 aa		13.71	□□□□□ -0.21
PPFIA4-208	ENST00000597023	THBS1	P07996	1170 aa		13.71	□□□□□ -0.21
PPFIA4-208	ENST00000597023	CDKN1A	P38936	164 aa		13.71	□□□□□ -0.21
PPFIA4-208	ENST00000597023	ZNF83	P51522	516 aa		13.71	□□□□□ -0.21
PPFIA4-208	ENST00000597023	ATP5J2	P56134	94 aa		13.71	□□□□□ -0.21
PPFIA4-208	ENST00000597023	LTB	Q06643	244 aa		13.71	□□□□□ -0.21
PPFIA4-208	ENST00000597023	SLC17A1	Q14916	467 aa		13.71	□□□□□ -0.21
PPFIA4-208	ENST00000597023	ZNF672	Q499Z4	452 aa	Predicted RBP	13.71	□□□□□ -0.21
PPFIA4-208	ENST00000597023	TSPO2	Q5TGU0	170 aa		13.71	□□□□□ -0.21
PPFIA4-208	ENST00000597023	RNF220	Q5VTB9	566 aa		13.71	□□□□□ -0.21
PPFIA4-208	ENST00000597023	PRSS57	Q6UWY2	283 aa		13.71	□□□□□ -0.21
PPFIA4-208	ENST00000597023	SSX8	Q7RTT4	187 aa		13.71	□□□□□ -0.21
PPFIA4-208	ENST00000597023	GPAT4	Q86UL3	456 aa		13.71	□□□□□ -0.21
PPFIA4-208	ENST00000597023	NFKBID	Q8NI38	313 aa		13.71	□□□□□ -0.21
PPFIA4-208	ENST00000597023	SMAP2	Q8WU79	429 aa	Predicted RBP	13.71	□□□□□ -0.21
PPFIA4-208	ENST00000597023	FBXW5	Q969U6	566 aa		13.71	□□□□□ -0.21
PPFIA4-208	ENST00000597023	ZNF385A	Q96PM9	386 aa	Known RBP	13.71	□□□□□ -0.21
PPFIA4-208	ENST00000597023	A4GALT	Q9NPC4	353 aa		13.71	□□□□□ -0.21
PPFIA4-208	ENST00000597023	SLC7A10	Q9NS82	523 aa		13.71	□□□□□ -0.21
PPFIA4-208	ENST00000597023	INTS9	Q9NV88	658 aa	Known RBP	13.71	□□□□□ -0.21
PPFIA4-208	ENST00000597023	ASB6	Q9NWX5	421 aa		13.71	□□□□□ -0.21
PPFIA4-208	ENST00000597023	VAPA	Q9P0L0	249 aa		13.71	□□□□□ -0.21
PPFIA4-208	ENST00000597023	UPB1	Q9UBR1	384 aa		13.71	□□□□□ -0.21
PPFIA4-208	ENST00000597023	IFT52	Q9Y366	437 aa		13.71	□□□□□ -0.21
PPFIA4-208	ENST00000597023	MAGED1	Q9Y5V3	778 aa	Predicted RBP	13.71	□□□□□ -0.21
PPFIA4-208	ENST00000597023	ZFHX3	Q15911	3703 aa		13.71	□□□□□ -0.22
PPFIA4-208	ENST00000597023	MTOR	P42345	2549 aa		13.7	□□□□□ -0.22
PPFIA4-208	ENST00000597023	ROS1	P08922	2347 aa		13.7	□□□□□ -0.22
PPFIA4-208	ENST00000597023	ABCD4	O14678	606 aa		13.7	□□□□□ -0.22
PPFIA4-208	ENST00000597023	CNOT4	O95628	575 aa	Known RBP	13.7	□□□□□ -0.22
PPFIA4-208	ENST00000597023	ITGA5	P08648	1049 aa		13.7	□□□□□ -0.22
PPFIA4-208	ENST00000597023	DANCR	P0C864	163 aa		13.7	□□□□□ -0.22
PPFIA4-208	ENST00000597023	MRPL19	P49406	292 aa	Known RBP	13.7	□□□□□ -0.22
PPFIA4-208	ENST00000597023	RPS4X	P62701	263 aa	Known RBP	13.7	□□□□□ -0.22
PPFIA4-208	ENST00000597023	SPOCK1	Q08629	439 aa		13.7	□□□□□ -0.22
PPFIA4-208	ENST00000597023	PGGHG	Q32M88	737 aa		13.7	□□□□□ -0.22
PPFIA4-208	ENST00000597023	GCNT6	Q5T4J0	391 aa		13.7	□□□□□ -0.22
PPFIA4-208	ENST00000597023	PAQR6	Q6TCH4	344 aa		13.7	□□□□□ -0.22
PPFIA4-208	ENST00000597023	COMTD1	Q86VU5	262 aa		13.7	□□□□□ -0.22
PPFIA4-208	ENST00000597023	PIAS4	Q8N2W9	510 aa	Predicted RBP	13.7	□□□□□ -0.22
PPFIA4-208	ENST00000597023	ZIC4	Q8N9L1	334 aa		13.7	□□□□□ -0.22
PPFIA4-208	ENST00000597023	BBS10	Q8TAM1	723 aa		13.7	□□□□□ -0.22
PPFIA4-208	ENST00000597023	C3orf49	Q96BT1	292 aa		13.7	□□□□□ -0.22
PPFIA4-208	ENST00000597023	COX4I2	Q96KJ9	171 aa		13.7	□□□□□ -0.22
PPFIA4-208	ENST00000597023	SIKE1	Q9BRV8	207 aa		13.7	□□□□□ -0.22
PPFIA4-208	ENST00000597023	PRR14	Q9BWN1	585 aa		13.7	□□□□□ -0.22
PPFIA4-208	ENST00000597023	TAPBPL	Q9BX59	468 aa		13.7	□□□□□ -0.22
PPFIA4-208	ENST00000597023	TRIM2	Q9C040	744 aa		13.7	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms