RNA–Protein interactions for RNA: ENST00000596014.5

PNKP-207, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-207ENST00000596014 IL2RAP01589 272 aa17.3■□□□□ 0.36
PNKP-207ENST00000596014 SMSP52788 366 aa17.3■□□□□ 0.36
PNKP-207ENST00000596014 RAC3P60763 192 aa17.3■□□□□ 0.36
PNKP-207ENST00000596014 RIPPLY2Q5TAB7 128 aa17.3■□□□□ 0.36
PNKP-207ENST00000596014 DEF8Q6ZN54 512 aa17.3■□□□□ 0.36
PNKP-207ENST00000596014 P4HA3Q7Z4N8 544 aa17.3■□□□□ 0.36
PNKP-207ENST00000596014 SPATA24Q86W54 205 aa17.3■□□□□ 0.36
PNKP-207ENST00000596014 PQLC1Q8N2U9 271 aa17.3■□□□□ 0.36
PNKP-207ENST00000596014 RNF217Q8TC41 542 aa17.3■□□□□ 0.36
PNKP-207ENST00000596014 SSC4DQ8WTU2 575 aa17.3■□□□□ 0.36
PNKP-207ENST00000596014 GEMIN6Q8WXD5 167 aaKnown RBP17.3■□□□□ 0.36
PNKP-207ENST00000596014 CPNE4Q96A23 557 aaPredicted RBP17.3■□□□□ 0.36
PNKP-207ENST00000596014 DNAJA3Q96EY1 480 aa17.3■□□□□ 0.36
PNKP-207ENST00000596014 ZNF184Q99676 751 aaPredicted RBP17.3■□□□□ 0.36
PNKP-207ENST00000596014 POTEKPQ9BYX7 375 aa17.3■□□□□ 0.36
PNKP-207ENST00000596014 AMBRA1Q9C0C7 1298 aa17.3■□□□□ 0.36
PNKP-207ENST00000596014 VCX3BQ9H321 246 aa17.3■□□□□ 0.36
PNKP-207ENST00000596014 C6orf203Q9P0P8 240 aaPredicted RBP17.3■□□□□ 0.36
PNKP-207ENST00000596014 Q9UFV3 132 aa17.3■□□□□ 0.36
PNKP-207ENST00000596014 MCTS1Q9ULC4 181 aaKnown RBP17.3■□□□□ 0.36
PNKP-207ENST00000596014 RNF6Q9Y252 685 aa17.3■□□□□ 0.36
PNKP-207ENST00000596014 SPTAN1Q13813 2472 aaKnown RBP17.3■□□□□ 0.36
PNKP-207ENST00000596014 A0A087WUJ7 227 aa17.29■□□□□ 0.36
PNKP-207ENST00000596014 TRAPPC13A5PLN9 417 aa17.29■□□□□ 0.36
PNKP-207ENST00000596014 RCBTB2O95199 551 aa17.29■□□□□ 0.36
PNKP-207ENST00000596014 SYNGR4O95473 234 aa17.29■□□□□ 0.36
PNKP-207ENST00000596014 THY1P04216 161 aa17.29■□□□□ 0.36
PNKP-207ENST00000596014 PPP4R4Q6NUP7 873 aa17.29■□□□□ 0.36
PNKP-207ENST00000596014 IZUMO2Q6UXV1 221 aa17.29■□□□□ 0.36
PNKP-207ENST00000596014 CYP2R1Q6VVX0 501 aa17.29■□□□□ 0.36
PNKP-207ENST00000596014 MRGPRGQ86SM5 289 aa17.29■□□□□ 0.36
PNKP-207ENST00000596014 FAM86B1Q8N7N1 296 aa17.29■□□□□ 0.36
PNKP-207ENST00000596014 NAXEQ8NCW5 288 aa17.29■□□□□ 0.36
PNKP-207ENST00000596014 STK35Q8TDR2 534 aa17.29■□□□□ 0.36
PNKP-207ENST00000596014 PRRG4Q9BZD6 226 aa17.29■□□□□ 0.36
PNKP-207ENST00000596014 MUC13Q9H3R2 512 aa17.29■□□□□ 0.36
PNKP-207ENST00000596014 TRAPPC4Q9Y296 219 aa17.29■□□□□ 0.36
PNKP-207ENST00000596014 UTP20O75691 2785 aaKnown RBP17.29■□□□□ 0.36
PNKP-207ENST00000596014 CHP2O43745 196 aa17.29■□□□□ 0.36
PNKP-207ENST00000596014 NPIPB7O75200 414 aa17.29■□□□□ 0.36
PNKP-207ENST00000596014 AQP8O94778 261 aa17.29■□□□□ 0.36
PNKP-207ENST00000596014 LYPD3O95274 346 aa17.29■□□□□ 0.36
PNKP-207ENST00000596014 STAMBPO95630 424 aa17.29■□□□□ 0.36
PNKP-207ENST00000596014 PMS2P2O95744 297 aa17.29■□□□□ 0.36
PNKP-207ENST00000596014 IFNW1P05000 195 aa17.29■□□□□ 0.36
PNKP-207ENST00000596014 IMPDH2P12268 514 aa17.29■□□□□ 0.36
PNKP-207ENST00000596014 PEX2P28328 305 aa17.29■□□□□ 0.36
PNKP-207ENST00000596014 TAS2R41P59536 307 aa17.29■□□□□ 0.36
PNKP-207ENST00000596014 CSNK2A1P68400 391 aaPredicted RBP17.29■□□□□ 0.36
PNKP-207ENST00000596014 EGR4Q05215 589 aa17.29■□□□□ 0.36
PNKP-207ENST00000596014 PIN1Q13526 163 aaPredicted RBP17.29■□□□□ 0.36
PNKP-207ENST00000596014 ZNF239Q16600 458 aaKnown RBP17.29■□□□□ 0.36
PNKP-207ENST00000596014 LINC00114Q6XXX2 140 aa17.29■□□□□ 0.36
PNKP-207ENST00000596014 DHFR2Q86XF0 187 aa17.29■□□□□ 0.36
PNKP-207ENST00000596014 CCDC71Q8IV32 467 aaPredicted RBP17.29■□□□□ 0.36
PNKP-207ENST00000596014 ITLN2Q8WWU7 325 aaPredicted RBP17.29■□□□□ 0.36
PNKP-207ENST00000596014 PYURFQ96I23 114 aa17.29■□□□□ 0.36
PNKP-207ENST00000596014 POLR2J2Q9GZM3 115 aaKnown RBP17.29■□□□□ 0.36
PNKP-207ENST00000596014 POLR2J3Q9H1A7 115 aaKnown RBP17.29■□□□□ 0.36
PNKP-207ENST00000596014 RNF122Q9H9V4 155 aa17.29■□□□□ 0.36
PNKP-207ENST00000596014 COQ3Q9NZJ6 369 aa17.29■□□□□ 0.36
PNKP-207ENST00000596014 USP9YO00507 2555 aaPredicted RBP17.28■□□□□ 0.36
PNKP-207ENST00000596014 DOPEY2Q9Y3R5 2298 aa17.28■□□□□ 0.36
PNKP-207ENST00000596014 HSPB2A8KAH6 182 aa17.28■□□□□ 0.36
PNKP-207ENST00000596014 FCGR2AP12318 317 aa17.28■□□□□ 0.36
PNKP-207ENST00000596014 ATP6V1B2P21281 511 aa17.28■□□□□ 0.36
PNKP-207ENST00000596014 TRIP10Q15642 601 aa17.28■□□□□ 0.36
PNKP-207ENST00000596014 HSPB2Q16082 182 aa17.28■□□□□ 0.36
PNKP-207ENST00000596014 OR2A2Q6IF42 318 aa17.28■□□□□ 0.36
PNKP-207ENST00000596014 LCN8Q6JVE9 175 aa17.28■□□□□ 0.36
PNKP-207ENST00000596014 GDF7Q7Z4P5 450 aa17.28■□□□□ 0.36
PNKP-207ENST00000596014 ROBO4Q8WZ75 1007 aa17.28■□□□□ 0.36
PNKP-207ENST00000596014 SDCCAG3Q96C92 435 aa17.28■□□□□ 0.36
PNKP-207ENST00000596014 RIMS3Q9UJD0 308 aa17.28■□□□□ 0.36
PNKP-207ENST00000596014 SLC7A7Q9UM01 511 aa17.28■□□□□ 0.36
PNKP-207ENST00000596014 LRCH1Q9Y2L9 728 aa17.28■□□□□ 0.36
PNKP-207ENST00000596014 V9GYQ6 96 aa17.28■□□□□ 0.36
PNKP-207ENST00000596014 IGKV1D-42A0A075B6H8 117 aa17.27■□□□□ 0.36
PNKP-207ENST00000596014 TCRBV3S1A0A5B6 114 aa17.27■□□□□ 0.36
PNKP-207ENST00000596014 OR5F1O95221 314 aa17.27■□□□□ 0.36
PNKP-207ENST00000596014 AGAP20933 346 aa17.27■□□□□ 0.36
PNKP-207ENST00000596014 ENPP1P22413 925 aa17.27■□□□□ 0.36
PNKP-207ENST00000596014 IDUAP35475 653 aa17.27■□□□□ 0.36
PNKP-207ENST00000596014 YAP1P46937 504 aaKnown RBP17.27■□□□□ 0.36
PNKP-207ENST00000596014 OR2B6P58173 313 aa17.27■□□□□ 0.36
PNKP-207ENST00000596014 C1orf140Q5VVS0 124 aa17.27■□□□□ 0.36
PNKP-207ENST00000596014 LPCAT4Q643R3 524 aa17.27■□□□□ 0.36
PNKP-207ENST00000596014 XKRXQ6PP77 449 aa17.27■□□□□ 0.36
PNKP-207ENST00000596014 GCNT2Q8N0V5 402 aa17.27■□□□□ 0.36
PNKP-207ENST00000596014 ZNF808Q8N4W9 903 aaPredicted RBP17.27■□□□□ 0.36
PNKP-207ENST00000596014 INTS12Q96CB8 462 aaKnown RBP17.27■□□□□ 0.36
PNKP-207ENST00000596014 KTI12Q96EK9 354 aaPredicted RBP17.27■□□□□ 0.36
PNKP-207ENST00000596014 SLC41A3Q96GZ6 507 aa17.27■□□□□ 0.36
PNKP-207ENST00000596014 ZFP3Q96NJ6 502 aa17.27■□□□□ 0.36
PNKP-207ENST00000596014 TRIM15Q9C019 465 aa17.27■□□□□ 0.36
PNKP-207ENST00000596014 A4GNTQ9UNA3 340 aa17.27■□□□□ 0.36
PNKP-207ENST00000596014 CACNA1CQ13936 2221 aa17.27■□□□□ 0.36
PNKP-207ENST00000596014 TMIGD3P0DMS9 266 aaPredicted RBP17.26■□□□□ 0.35
PNKP-207ENST00000596014 CHRNB4P30926 498 aa17.26■□□□□ 0.35
PNKP-207ENST00000596014 AGFG1P52594 562 aaKnown RBP17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 283.6 ms