RNA–Protein interactions for RNA: ENST00000595726.1

SHKBP1-208, Transcript of SH3KBP1 binding protein 1, human

TSL 3

Gene SHKBP1, Length 684 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SHKBP1-208	ENST00000595726	MUS81	Q96NY9	551 aa		11.98	□□□□□ -0.49
SHKBP1-208	ENST00000595726	SERHL2	Q9H4I8	314 aa		11.98	□□□□□ -0.49
SHKBP1-208	ENST00000595726	FAF1	Q9UNN5	650 aa	Predicted RBP	11.98	□□□□□ -0.49
SHKBP1-208	ENST00000595726	KCNE3	Q9Y6H6	103 aa		11.98	□□□□□ -0.49
SHKBP1-208	ENST00000595726	RNF103-CHMP3	A0A140T963	221 aa		11.97	□□□□□ -0.49
SHKBP1-208	ENST00000595726		A0A1W2PQD3	144 aa		11.97	□□□□□ -0.49
SHKBP1-208	ENST00000595726	GJE1	A6NN92	205 aa		11.97	□□□□□ -0.49
SHKBP1-208	ENST00000595726	ZNF724	A8MTY0	619 aa		11.97	□□□□□ -0.49
SHKBP1-208	ENST00000595726	NUDT14	O95848	222 aa		11.97	□□□□□ -0.49
SHKBP1-208	ENST00000595726	DAO	P14920	347 aa		11.97	□□□□□ -0.49
SHKBP1-208	ENST00000595726	H2AFX	P16104	143 aa	Predicted RBP	11.97	□□□□□ -0.49
SHKBP1-208	ENST00000595726	GIF	P27352	417 aa		11.97	□□□□□ -0.49
SHKBP1-208	ENST00000595726	ELK4	P28324	431 aa		11.97	□□□□□ -0.49
SHKBP1-208	ENST00000595726	SLC7A1	P30825	629 aa		11.97	□□□□□ -0.49
SHKBP1-208	ENST00000595726	SERPINF1	P36955	418 aa		11.97	□□□□□ -0.49
SHKBP1-208	ENST00000595726	NME5	P56597	212 aa		11.97	□□□□□ -0.49
SHKBP1-208	ENST00000595726	HILS1	P60008	231 aa		11.97	□□□□□ -0.49
SHKBP1-208	ENST00000595726	UFM1	P61960	85 aa		11.97	□□□□□ -0.49
SHKBP1-208	ENST00000595726	RPS26	P62854	115 aa	Known RBP	11.97	□□□□□ -0.49
SHKBP1-208	ENST00000595726	ZNF117	Q03924	483 aa		11.97	□□□□□ -0.49
SHKBP1-208	ENST00000595726	SLC9B1	Q4ZJI4	515 aa		11.97	□□□□□ -0.49
SHKBP1-208	ENST00000595726	ANKRD46	Q86W74	232 aa		11.97	□□□□□ -0.49
SHKBP1-208	ENST00000595726	CLEC4F	Q8N1N0	589 aa		11.97	□□□□□ -0.49
SHKBP1-208	ENST00000595726	OR5D16	Q8NGK9	328 aa		11.97	□□□□□ -0.49
SHKBP1-208	ENST00000595726	OR4A15	Q8NGL6	344 aa		11.97	□□□□□ -0.49
SHKBP1-208	ENST00000595726	HPS1	Q92902	700 aa		11.97	□□□□□ -0.49
SHKBP1-208	ENST00000595726	MRGPRX4	Q96LA9	322 aa		11.97	□□□□□ -0.49
SHKBP1-208	ENST00000595726	OR7D2	Q96RA2	312 aa		11.97	□□□□□ -0.49
SHKBP1-208	ENST00000595726	ZNF747	Q9BV97	191 aa		11.97	□□□□□ -0.49
SHKBP1-208	ENST00000595726	LPAR2	Q9HBW0	351 aa		11.97	□□□□□ -0.49
SHKBP1-208	ENST00000595726	MYOZ1	Q9NP98	299 aa	Predicted RBP	11.97	□□□□□ -0.49
SHKBP1-208	ENST00000595726	UBQLN4	Q9NRR5	601 aa		11.97	□□□□□ -0.49
SHKBP1-208	ENST00000595726	GPR45	Q9Y5Y3	372 aa		11.97	□□□□□ -0.49
SHKBP1-208	ENST00000595726	KMT2C	Q8NEZ4	4911 aa	Known RBP	11.96	□□□□□ -0.49
SHKBP1-208	ENST00000595726	PRSS51	A0A1B0GVH4	220 aa		11.96	□□□□□ -0.49
SHKBP1-208	ENST00000595726	LYNX1	G3V0Z9	82 aa		11.96	□□□□□ -0.49
SHKBP1-208	ENST00000595726	SCD	O00767	359 aa		11.96	□□□□□ -0.49
SHKBP1-208	ENST00000595726	LYNX1	P0DP58	116 aa		11.96	□□□□□ -0.49
SHKBP1-208	ENST00000595726	HPGD	P15428	266 aa		11.96	□□□□□ -0.49
SHKBP1-208	ENST00000595726	PGC	P20142	388 aa		11.96	□□□□□ -0.49
SHKBP1-208	ENST00000595726	IL12A	P29459	219 aa		11.96	□□□□□ -0.49
SHKBP1-208	ENST00000595726	NDUFAF6	Q330K2	333 aa		11.96	□□□□□ -0.49
SHKBP1-208	ENST00000595726	ANXA8L1	Q5VT79	327 aa		11.96	□□□□□ -0.49
SHKBP1-208	ENST00000595726	C6orf120	Q7Z4R8	191 aa		11.96	□□□□□ -0.49
SHKBP1-208	ENST00000595726	OR52E4	Q8NGH9	312 aa		11.96	□□□□□ -0.49
SHKBP1-208	ENST00000595726	SLC35G5	Q96KT7	338 aa		11.96	□□□□□ -0.49
SHKBP1-208	ENST00000595726	RBM4	Q9BWF3	364 aa	Known RBP	11.96	□□□□□ -0.49
SHKBP1-208	ENST00000595726	ARGLU1	Q9NWB6	273 aa	Predicted RBP	11.96	□□□□□ -0.49
SHKBP1-208	ENST00000595726	ASB6	Q9NWX5	421 aa		11.96	□□□□□ -0.49
SHKBP1-208	ENST00000595726	PCDHGB4	Q9UN71	923 aa		11.96	□□□□□ -0.49
SHKBP1-208	ENST00000595726	H6PD	O95479	791 aa		11.95	□□□□□ -0.5
SHKBP1-208	ENST00000595726	CPSF4	O95639	269 aa	Known RBP	11.95	□□□□□ -0.5
SHKBP1-208	ENST00000595726	ITGA5	P08648	1049 aa		11.95	□□□□□ -0.5
SHKBP1-208	ENST00000595726	ATP6V1C1	P21283	382 aa		11.95	□□□□□ -0.5
SHKBP1-208	ENST00000595726	MATN1	P21941	496 aa		11.95	□□□□□ -0.5
SHKBP1-208	ENST00000595726	UQCRC2	P22695	453 aa		11.95	□□□□□ -0.5
SHKBP1-208	ENST00000595726	S100A3	P33764	101 aa		11.95	□□□□□ -0.5
SHKBP1-208	ENST00000595726	ARFIP2	P53365	341 aa		11.95	□□□□□ -0.5
SHKBP1-208	ENST00000595726	DDX59	Q5T1V6	619 aa	Known RBP eCLIP	11.95	□□□□□ -0.5
SHKBP1-208	ENST00000595726	NXN	Q6DKJ4	435 aa		11.95	□□□□□ -0.5
SHKBP1-208	ENST00000595726	VHLL	Q6RSH7	139 aa		11.95	□□□□□ -0.5
SHKBP1-208	ENST00000595726	SHISA2	Q6UWI4	295 aa		11.95	□□□□□ -0.5
SHKBP1-208	ENST00000595726	HDX	Q7Z353	690 aa		11.95	□□□□□ -0.5
SHKBP1-208	ENST00000595726	MISP	Q8IVT2	679 aa		11.95	□□□□□ -0.5
SHKBP1-208	ENST00000595726	VPS37A	Q8NEZ2	397 aa		11.95	□□□□□ -0.5
SHKBP1-208	ENST00000595726	TOR1AIP2	Q8NFQ8	470 aa		11.95	□□□□□ -0.5
SHKBP1-208	ENST00000595726	PHOSPHO1	Q8TCT1	267 aa		11.95	□□□□□ -0.5
SHKBP1-208	ENST00000595726	MIPOL1	Q8TD10	442 aa		11.95	□□□□□ -0.5
SHKBP1-208	ENST00000595726	APH1A	Q96BI3	265 aa		11.95	□□□□□ -0.5
SHKBP1-208	ENST00000595726	DNAJA3	Q96EY1	480 aa		11.95	□□□□□ -0.5
SHKBP1-208	ENST00000595726	C7orf26	Q96N11	449 aa		11.95	□□□□□ -0.5
SHKBP1-208	ENST00000595726	CCDC115	Q96NT0	180 aa		11.95	□□□□□ -0.5
SHKBP1-208	ENST00000595726	OR5B2	Q96R09	309 aa		11.95	□□□□□ -0.5
SHKBP1-208	ENST00000595726	VIPAS39	Q9H9C1	493 aa		11.95	□□□□□ -0.5
SHKBP1-208	ENST00000595726	HHATL	Q9HCP6	504 aa		11.95	□□□□□ -0.5
SHKBP1-208	ENST00000595726	HIF1AN	Q9NWT6	349 aa		11.95	□□□□□ -0.5
SHKBP1-208	ENST00000595726	TAS2R16	Q9NYV7	291 aa		11.95	□□□□□ -0.5
SHKBP1-208	ENST00000595726	CARD8	Q9Y2G2	431 aa		11.95	□□□□□ -0.5
SHKBP1-208	ENST00000595726	NOSIP	Q9Y314	301 aa	Known RBP	11.95	□□□□□ -0.5
SHKBP1-208	ENST00000595726	DUXA	A6NLW8	204 aa		11.94	□□□□□ -0.5
SHKBP1-208	ENST00000595726	NPIPB9	F8W1W9	429 aa		11.94	□□□□□ -0.5
SHKBP1-208	ENST00000595726	AK1	P00568	194 aa		11.94	□□□□□ -0.5
SHKBP1-208	ENST00000595726	OR4A8	P0C604	315 aa		11.94	□□□□□ -0.5
SHKBP1-208	ENST00000595726	IDO1	P14902	403 aa		11.94	□□□□□ -0.5
SHKBP1-208	ENST00000595726	PRKCA	P17252	672 aa		11.94	□□□□□ -0.5
SHKBP1-208	ENST00000595726	IDH3G	P51553	393 aa	Predicted RBP	11.94	□□□□□ -0.5
SHKBP1-208	ENST00000595726	PDCD4	Q53EL6	469 aa	Known RBP	11.94	□□□□□ -0.5
SHKBP1-208	ENST00000595726	KLHL26	Q53HC5	615 aa		11.94	□□□□□ -0.5
SHKBP1-208	ENST00000595726	SAXO2	Q658L1	398 aa		11.94	□□□□□ -0.5
SHKBP1-208	ENST00000595726	OR7E24	Q6IFN5	339 aa		11.94	□□□□□ -0.5
SHKBP1-208	ENST00000595726	SHQ1	Q6PI26	577 aa	Known RBP	11.94	□□□□□ -0.5
SHKBP1-208	ENST00000595726	C1orf229	Q6ZS94	237 aa	Predicted RBP	11.94	□□□□□ -0.5
SHKBP1-208	ENST00000595726	MTERF4	Q7Z6M4	381 aa	Known RBP	11.94	□□□□□ -0.5
SHKBP1-208	ENST00000595726	GLCCI1	Q86VQ1	547 aa		11.94	□□□□□ -0.5
SHKBP1-208	ENST00000595726	LSR	Q86X29	649 aa	Predicted RBP	11.94	□□□□□ -0.5
SHKBP1-208	ENST00000595726	ZNF527	Q8NB42	609 aa		11.94	□□□□□ -0.5
SHKBP1-208	ENST00000595726	GPR119	Q8TDV5	335 aa		11.94	□□□□□ -0.5
SHKBP1-208	ENST00000595726	LRRC8C	Q8TDW0	803 aa		11.94	□□□□□ -0.5
SHKBP1-208	ENST00000595726	NEURL3	Q96EH8	262 aa		11.94	□□□□□ -0.5
SHKBP1-208	ENST00000595726	OR52B2	Q96RD2	323 aa		11.94	□□□□□ -0.5

Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms