RNA–Protein interactions for RNA: ENST00000595242.3

SCAF1-202, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-202ENST00000595242 GMPPBQ9Y5P6 360 aa11.58□□□□□ -0.56
SCAF1-202ENST00000595242 KCNE3Q9Y6H6 103 aa11.58□□□□□ -0.56
SCAF1-202ENST00000595242 VGLL3A8MV65 326 aa11.57□□□□□ -0.56
SCAF1-202ENST00000595242 ZNF701M0R085 212 aaPredicted RBP11.57□□□□□ -0.56
SCAF1-202ENST00000595242 SLC1A7O00341 560 aa11.57□□□□□ -0.56
SCAF1-202ENST00000595242 ABCB7O75027 752 aa11.57□□□□□ -0.56
SCAF1-202ENST00000595242 SOX30O94993 753 aa11.57□□□□□ -0.56
SCAF1-202ENST00000595242 AK1P00568 194 aa11.57□□□□□ -0.56
SCAF1-202ENST00000595242 ADAP00813 363 aa11.57□□□□□ -0.56
SCAF1-202ENST00000595242 RFPL3SP0C7P2 107 aa11.57□□□□□ -0.56
SCAF1-202ENST00000595242 SLC35E2P0CK97 266 aa11.57□□□□□ -0.56
SCAF1-202ENST00000595242 ACP2P11117 423 aa11.57□□□□□ -0.56
SCAF1-202ENST00000595242 IL7RP16871 459 aa11.57□□□□□ -0.56
SCAF1-202ENST00000595242 PRKAR1BP31321 381 aa11.57□□□□□ -0.56
SCAF1-202ENST00000595242 GGT2P36268 569 aa11.57□□□□□ -0.56
SCAF1-202ENST00000595242 CDK5R2Q13319 367 aa11.57□□□□□ -0.56
SCAF1-202ENST00000595242 MAD2L1BPQ15013 274 aaPredicted RBP11.57□□□□□ -0.56
SCAF1-202ENST00000595242 ARHGAP11BQ3KRB8 267 aa11.57□□□□□ -0.56
SCAF1-202ENST00000595242 LINC00471Q8N535 108 aa11.57□□□□□ -0.56
SCAF1-202ENST00000595242 MAPK1IP1LQ8NDC0 245 aa11.57□□□□□ -0.56
SCAF1-202ENST00000595242 ADAMTS15Q8TE58 950 aa11.57□□□□□ -0.56
SCAF1-202ENST00000595242 PMM1Q92871 262 aa11.57□□□□□ -0.56
SCAF1-202ENST00000595242 SLC35A4Q96G79 324 aa11.57□□□□□ -0.56
SCAF1-202ENST00000595242 PRRC1Q96M27 445 aa11.57□□□□□ -0.56
SCAF1-202ENST00000595242 STACQ99469 402 aa11.57□□□□□ -0.56
SCAF1-202ENST00000595242 RBM24Q9BX46 236 aaKnown RBP11.57□□□□□ -0.56
SCAF1-202ENST00000595242 ZNF703Q9H7S9 590 aaPredicted RBP11.57□□□□□ -0.56
SCAF1-202ENST00000595242 ACKR4Q9NPB9 350 aa11.57□□□□□ -0.56
SCAF1-202ENST00000595242 DUSP22Q9NRW4 184 aa11.57□□□□□ -0.56
SCAF1-202ENST00000595242 GALNT8Q9NY28 637 aa11.57□□□□□ -0.56
SCAF1-202ENST00000595242 A4GNTQ9UNA3 340 aa11.57□□□□□ -0.56
SCAF1-202ENST00000595242 SLC9A8Q9Y2E8 581 aa11.57□□□□□ -0.56
SCAF1-202ENST00000595242 CEPT1Q9Y6K0 416 aa11.57□□□□□ -0.56
SCAF1-202ENST00000595242 COMMD3-BMI1R4GMX3 469 aa11.57□□□□□ -0.56
SCAF1-202ENST00000595242 A0A1W2PRQ8 180 aa11.56□□□□□ -0.56
SCAF1-202ENST00000595242 FAAHO00519 579 aa11.56□□□□□ -0.56
SCAF1-202ENST00000595242 H1F0P07305 194 aaKnown RBP11.56□□□□□ -0.56
SCAF1-202ENST00000595242 RNH1P13489 461 aaKnown RBP11.56□□□□□ -0.56
SCAF1-202ENST00000595242 RPS4Y1P22090 263 aaKnown RBP11.56□□□□□ -0.56
SCAF1-202ENST00000595242 YAP1P46937 504 aaKnown RBP11.56□□□□□ -0.56
SCAF1-202ENST00000595242 SH3BGRP55822 239 aaPredicted RBP11.56□□□□□ -0.56
SCAF1-202ENST00000595242 RPP38P78345 283 aaKnown RBP11.56□□□□□ -0.56
SCAF1-202ENST00000595242 MAP4K2Q12851 820 aa11.56□□□□□ -0.56
SCAF1-202ENST00000595242 TNK1Q13470 666 aa11.56□□□□□ -0.56
SCAF1-202ENST00000595242 DGCR6Q14129 220 aa11.56□□□□□ -0.56
SCAF1-202ENST00000595242 KRTAP24-1Q3LI83 254 aa11.56□□□□□ -0.56
SCAF1-202ENST00000595242 CHRFAM7AQ494W8 412 aa11.56□□□□□ -0.56
SCAF1-202ENST00000595242 ZBED5Q49AG3 693 aa11.56□□□□□ -0.56
SCAF1-202ENST00000595242 CYP27C1Q4G0S4 372 aa11.56□□□□□ -0.56
SCAF1-202ENST00000595242 GPAT3Q53EU6 434 aa11.56□□□□□ -0.56
SCAF1-202ENST00000595242 NSUN5P2Q63ZY6 315 aa11.56□□□□□ -0.56
SCAF1-202ENST00000595242 FRRS1Q6ZNA5 592 aa11.56□□□□□ -0.56
SCAF1-202ENST00000595242 C20orf204Q6ZNR8 217 aa11.56□□□□□ -0.56
SCAF1-202ENST00000595242 COMTD1Q86VU5 262 aa11.56□□□□□ -0.56
SCAF1-202ENST00000595242 ZNF595Q8IYB9 648 aa11.56□□□□□ -0.56
SCAF1-202ENST00000595242 DGCR6LQ9BY27 220 aa11.56□□□□□ -0.56
SCAF1-202ENST00000595242 YIPF3Q9GZM5 350 aa11.56□□□□□ -0.56
SCAF1-202ENST00000595242 ZNF350Q9GZX5 532 aa11.56□□□□□ -0.56
SCAF1-202ENST00000595242 SAP130Q9H0E3 1048 aa11.56□□□□□ -0.56
SCAF1-202ENST00000595242 ANKRD19PQ9H560 264 aa11.56□□□□□ -0.56
SCAF1-202ENST00000595242 NMNAT1Q9HAN9 279 aaPredicted RBP11.56□□□□□ -0.56
SCAF1-202ENST00000595242 POLE3Q9NRF9 147 aa11.56□□□□□ -0.56
SCAF1-202ENST00000595242 RLIMQ9NVW2 624 aa11.56□□□□□ -0.56
SCAF1-202ENST00000595242 PTTG2Q9NZH5 202 aa11.56□□□□□ -0.56
SCAF1-202ENST00000595242 NDRG3Q9UGV2 375 aa11.56□□□□□ -0.56
SCAF1-202ENST00000595242 MGAT4BQ9UQ53 548 aa11.56□□□□□ -0.56
SCAF1-202ENST00000595242 PCDHGB1Q9Y5G3 927 aa11.56□□□□□ -0.56
SCAF1-202ENST00000595242 TRBV4-1A0A0J9YWV2 114 aa11.55□□□□□ -0.56
SCAF1-202ENST00000595242 SIAH2O43255 324 aa11.55□□□□□ -0.56
SCAF1-202ENST00000595242 TLX2O43763 284 aaPredicted RBP11.55□□□□□ -0.56
SCAF1-202ENST00000595242 ZNF354AO60765 605 aaPredicted RBP11.55□□□□□ -0.56
SCAF1-202ENST00000595242 LDB3O75112 727 aa11.55□□□□□ -0.56
SCAF1-202ENST00000595242 COQ9O75208 318 aa11.55□□□□□ -0.56
SCAF1-202ENST00000595242 ANGPTL1O95841 491 aa11.55□□□□□ -0.56
SCAF1-202ENST00000595242 IL18BPO95998 194 aa11.55□□□□□ -0.56
SCAF1-202ENST00000595242 TP53P04637 393 aaPredicted RBP11.55□□□□□ -0.56
SCAF1-202ENST00000595242 THBS1P07996 1170 aa11.55□□□□□ -0.56
SCAF1-202ENST00000595242 HTR1AP08908 422 aa11.55□□□□□ -0.56
SCAF1-202ENST00000595242 CYP4B1P13584 511 aa11.55□□□□□ -0.56
SCAF1-202ENST00000595242 GALNSP34059 522 aa11.55□□□□□ -0.56
SCAF1-202ENST00000595242 ESRRGP62508 458 aa11.55□□□□□ -0.56
SCAF1-202ENST00000595242 CSNK2BP67870 215 aa11.55□□□□□ -0.56
SCAF1-202ENST00000595242 IL5RAQ01344 420 aa11.55□□□□□ -0.56
SCAF1-202ENST00000595242 CHRNEQ04844 493 aa11.55□□□□□ -0.56
SCAF1-202ENST00000595242 CRYZQ08257 329 aaKnown RBP11.55□□□□□ -0.56
SCAF1-202ENST00000595242 DUSP8Q13202 625 aa11.55□□□□□ -0.56
SCAF1-202ENST00000595242 GANABQ14697 944 aaKnown RBP11.55□□□□□ -0.56
SCAF1-202ENST00000595242 SF3B4Q15427 424 aaKnown RBP eCLIP11.55□□□□□ -0.56
SCAF1-202ENST00000595242 NPTX1Q15818 432 aa11.55□□□□□ -0.56
SCAF1-202ENST00000595242 DUSP5Q16690 384 aa11.55□□□□□ -0.56
SCAF1-202ENST00000595242 HSDL2Q6YN16 418 aa11.55□□□□□ -0.56
SCAF1-202ENST00000595242 C16orf62Q7Z3J2 963 aa11.55□□□□□ -0.56
SCAF1-202ENST00000595242 LUZP2Q86TE4 346 aa11.55□□□□□ -0.56
SCAF1-202ENST00000595242 OR4N5Q8IXE1 308 aa11.55□□□□□ -0.56
SCAF1-202ENST00000595242 TAGAPQ8N103 731 aa11.55□□□□□ -0.56
SCAF1-202ENST00000595242 MEIOBQ8N635 442 aa11.55□□□□□ -0.56
SCAF1-202ENST00000595242 CDRT4Q8N9R6 151 aa11.55□□□□□ -0.56
SCAF1-202ENST00000595242 SLC16A11Q8NCK7 471 aa11.55□□□□□ -0.56
SCAF1-202ENST00000595242 OR9Q2Q8NGE9 314 aa11.55□□□□□ -0.56
SCAF1-202ENST00000595242 PIK3IP1Q96FE7 263 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms