RNA–Protein interactions for RNA: ENST00000594387.1

IRF3-208, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 800 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-208ENST00000594387 TMEM27Q9HBJ8 222 aa15.39■□□□□ 0.05
IRF3-208ENST00000594387 UPB1Q9UBR1 384 aa15.39■□□□□ 0.05
IRF3-208ENST00000594387 PRSS50Q9UI38 385 aa15.39■□□□□ 0.05
IRF3-208ENST00000594387 ING1Q9UK53 422 aaPredicted RBP15.39■□□□□ 0.05
IRF3-208ENST00000594387 POLQO75417 2590 aa15.39■□□□□ 0.05
IRF3-208ENST00000594387 FBN2P35556 2912 aa15.39■□□□□ 0.05
IRF3-208ENST00000594387 MED13LQ71F56 2210 aa15.39■□□□□ 0.05
IRF3-208ENST00000594387 CIB4A0PJX0 185 aa15.38■□□□□ 0.05
IRF3-208ENST00000594387 CCT8L1PA6NM43 557 aa15.38■□□□□ 0.05
IRF3-208ENST00000594387 ZNF716A6NP11 495 aa15.38■□□□□ 0.05
IRF3-208ENST00000594387 ZNF814B7Z6K7 855 aa15.38■□□□□ 0.05
IRF3-208ENST00000594387 ATP8B1O43520 1251 aa15.38■□□□□ 0.05
IRF3-208ENST00000594387 AHSA1O95433 338 aa15.38■□□□□ 0.05
IRF3-208ENST00000594387 IMPDH2P12268 514 aa15.38■□□□□ 0.05
IRF3-208ENST00000594387 PRG2P13727 222 aa15.38■□□□□ 0.05
IRF3-208ENST00000594387 SLC16A1P53985 500 aa15.38■□□□□ 0.05
IRF3-208ENST00000594387 RGS8P57771 180 aaPredicted RBP15.38■□□□□ 0.05
IRF3-208ENST00000594387 GUCY1A3Q02108 690 aa15.38■□□□□ 0.05
IRF3-208ENST00000594387 BNIP2Q12982 314 aa15.38■□□□□ 0.05
IRF3-208ENST00000594387 TESK1Q15569 626 aa15.38■□□□□ 0.05
IRF3-208ENST00000594387 INTS11Q5TA45 600 aaKnown RBP15.38■□□□□ 0.05
IRF3-208ENST00000594387 C1orf140Q5VVS0 124 aa15.38■□□□□ 0.05
IRF3-208ENST00000594387 FBXW9Q5XUX1 488 aa15.38■□□□□ 0.05
IRF3-208ENST00000594387 RANBP3LQ86VV4 465 aaPredicted RBP15.38■□□□□ 0.05
IRF3-208ENST00000594387 OR52E4Q8NGH9 312 aa15.38■□□□□ 0.05
IRF3-208ENST00000594387 STK35Q8TDR2 534 aa15.38■□□□□ 0.05
IRF3-208ENST00000594387 DNAJA4Q8WW22 397 aaPredicted RBP15.38■□□□□ 0.05
IRF3-208ENST00000594387 MBD6Q96DN6 1003 aa15.38■□□□□ 0.05
IRF3-208ENST00000594387 PLPPR2Q96GM1 343 aa15.38■□□□□ 0.05
IRF3-208ENST00000594387 ALPK1Q96QP1 1244 aa15.38■□□□□ 0.05
IRF3-208ENST00000594387 ESRP2Q9H6T0 727 aaKnown RBP15.38■□□□□ 0.05
IRF3-208ENST00000594387 ASB6Q9NWX5 421 aa15.38■□□□□ 0.05
IRF3-208ENST00000594387 ADPRHL2Q9NX46 363 aa15.38■□□□□ 0.05
IRF3-208ENST00000594387 HEATR1Q9H583 2144 aaKnown RBP15.38■□□□□ 0.05
IRF3-208ENST00000594387 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP15.37■□□□□ 0.05
IRF3-208ENST00000594387 ZC3H12DA2A288 527 aaKnown RBP15.37■□□□□ 0.05
IRF3-208ENST00000594387 FRS3O43559 492 aa15.37■□□□□ 0.05
IRF3-208ENST00000594387 AKR7A3O95154 331 aa15.37■□□□□ 0.05
IRF3-208ENST00000594387 VAMP5O95183 116 aa15.37■□□□□ 0.05
IRF3-208ENST00000594387 ATE1O95260 518 aa15.37■□□□□ 0.05
IRF3-208ENST00000594387 THBDP07204 575 aa15.37■□□□□ 0.05
IRF3-208ENST00000594387 PNMTP11086 282 aa15.37■□□□□ 0.05
IRF3-208ENST00000594387 KLK2P20151 261 aa15.37■□□□□ 0.05
IRF3-208ENST00000594387 AQP1P29972 269 aa15.37■□□□□ 0.05
IRF3-208ENST00000594387 MTPNP58546 118 aa15.37■□□□□ 0.05
IRF3-208ENST00000594387 H3F3AP84243 136 aa15.37■□□□□ 0.05
IRF3-208ENST00000594387 SF3A3Q12874 501 aaKnown RBP eCLIP15.37■□□□□ 0.052e-6■■■□□ 16.7
IRF3-208ENST00000594387 TSC22D1Q15714 1073 aa15.37■□□□□ 0.05
IRF3-208ENST00000594387 STK11Q15831 433 aa15.37■□□□□ 0.05
IRF3-208ENST00000594387 ACKR1Q16570 336 aa15.37■□□□□ 0.05
IRF3-208ENST00000594387 DEFB113Q30KQ7 82 aa15.37■□□□□ 0.05
IRF3-208ENST00000594387 ULK3Q6PHR2 472 aa15.37■□□□□ 0.05
IRF3-208ENST00000594387 C5orf46Q6UWT4 87 aa15.37■□□□□ 0.05
IRF3-208ENST00000594387 CASP12Q6UXS9 341 aa15.37■□□□□ 0.05
IRF3-208ENST00000594387 C20orf204Q6ZNR8 217 aa15.37■□□□□ 0.05
IRF3-208ENST00000594387 GPAT4Q86UL3 456 aa15.37■□□□□ 0.05
IRF3-208ENST00000594387 P2RY8Q86VZ1 359 aa15.37■□□□□ 0.05
IRF3-208ENST00000594387 PCYOX1LQ8NBM8 494 aa15.37■□□□□ 0.05
IRF3-208ENST00000594387 C3orf49Q96BT1 292 aa15.37■□□□□ 0.05
IRF3-208ENST00000594387 ECSITQ9BQ95 431 aa15.37■□□□□ 0.05
IRF3-208ENST00000594387 SF3B5Q9BWJ5 86 aaKnown RBP15.37■□□□□ 0.05
IRF3-208ENST00000594387 IKZF5Q9H5V7 419 aa15.37■□□□□ 0.05
IRF3-208ENST00000594387 PIF1Q9H611 641 aa15.37■□□□□ 0.05
IRF3-208ENST00000594387 C12orf10Q9HB07 376 aa15.37■□□□□ 0.05
IRF3-208ENST00000594387 BEX4Q9NWD9 120 aaPredicted RBP15.37■□□□□ 0.05
IRF3-208ENST00000594387 TESQ9UGI8 421 aaKnown RBP15.37■□□□□ 0.05
IRF3-208ENST00000594387 CCDC168Q8NDH2 2452 aa15.36■□□□□ 0.05
IRF3-208ENST00000594387 LIPT2A6NK58 231 aa15.36■□□□□ 0.05
IRF3-208ENST00000594387 BBIP1A8MTZ0 92 aa15.36■□□□□ 0.05
IRF3-208ENST00000594387 OR2T1O43869 369 aa15.36■□□□□ 0.05
IRF3-208ENST00000594387 LYZL6O75951 148 aa15.36■□□□□ 0.05
IRF3-208ENST00000594387 KRT33AO76009 404 aa15.36■□□□□ 0.05
IRF3-208ENST00000594387 NPPAP01160 153 aa15.36■□□□□ 0.05
IRF3-208ENST00000594387 GGT1P19440 569 aa15.36■□□□□ 0.05
IRF3-208ENST00000594387 ADSLP30566 484 aaPredicted RBP15.36■□□□□ 0.05
IRF3-208ENST00000594387 MDH1P40925 334 aaKnown RBP15.36■□□□□ 0.05
IRF3-208ENST00000594387 HOXC5Q00444 222 aa15.36■□□□□ 0.05
IRF3-208ENST00000594387 TRMT5Q32P41 509 aaKnown RBP15.36■□□□□ 0.05
IRF3-208ENST00000594387 ALG10BQ5I7T1 473 aa15.36■□□□□ 0.05
IRF3-208ENST00000594387 C22orf34Q6ZV56 151 aa15.36■□□□□ 0.05
IRF3-208ENST00000594387 ZC3HAV1Q7Z2W4 902 aaKnown RBP15.36■□□□□ 0.05
IRF3-208ENST00000594387 PATL1Q86TB9 770 aaKnown RBP15.36■□□□□ 0.05
IRF3-208ENST00000594387 ATG4DQ86TL0 474 aaPredicted RBP15.36■□□□□ 0.05
IRF3-208ENST00000594387 RETREG3Q86VR2 466 aa15.36■□□□□ 0.05
IRF3-208ENST00000594387 TMEM99Q8N816 258 aa15.36■□□□□ 0.05
IRF3-208ENST00000594387 LSMEM1Q8N8F7 131 aa15.36■□□□□ 0.05
IRF3-208ENST00000594387 RASSF5Q8WWW0 418 aa15.36■□□□□ 0.05
IRF3-208ENST00000594387 SLC25A36Q96CQ1 311 aa15.36■□□□□ 0.05
IRF3-208ENST00000594387 SLC47A1Q96FL8 570 aa15.36■□□□□ 0.05
IRF3-208ENST00000594387 CCDC134Q9H6E4 229 aa15.36■□□□□ 0.05
IRF3-208ENST00000594387 GID8Q9NWU2 228 aa15.36■□□□□ 0.05
IRF3-208ENST00000594387 KLHL14Q9P2G3 628 aa15.36■□□□□ 0.05
IRF3-208ENST00000594387 CHST2Q9Y4C5 530 aa15.36■□□□□ 0.05
IRF3-208ENST00000594387 AQP7P3A6NL99 342 aa15.35■□□□□ 0.05
IRF3-208ENST00000594387 M0QX08 132 aa15.35■□□□□ 0.05
IRF3-208ENST00000594387 ARHGEF9O43307 516 aa15.35■□□□□ 0.05
IRF3-208ENST00000594387 KLF4O43474 513 aa15.35■□□□□ 0.05
IRF3-208ENST00000594387 IGHV3-9P01782 118 aa15.35■□□□□ 0.05
IRF3-208ENST00000594387 CD3EP07766 207 aa15.35■□□□□ 0.05
IRF3-208ENST00000594387 TGFBR3Q03167 851 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms