RNA–Protein interactions for RNA: ENST00000594067.5

LIG1-206, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 2,697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-206ENST00000594067 MT-ND4P03905 459 aa15.17■□□□□ 0.02
LIG1-206ENST00000594067 WNT1P04628 370 aa15.17■□□□□ 0.02
LIG1-206ENST00000594067 EPXP11678 715 aa15.17■□□□□ 0.02
LIG1-206ENST00000594067 HIST1H1CP16403 213 aaKnown RBP15.17■□□□□ 0.02
LIG1-206ENST00000594067 MAP3K8P41279 467 aa15.17■□□□□ 0.02
LIG1-206ENST00000594067 GDI2P50395 445 aaKnown RBP15.17■□□□□ 0.02
LIG1-206ENST00000594067 VSX2P58304 361 aaPredicted RBP15.17■□□□□ 0.02
LIG1-206ENST00000594067 ALG10BQ5I7T1 473 aa15.17■□□□□ 0.02
LIG1-206ENST00000594067 FGD2Q7Z6J4 655 aa15.17■□□□□ 0.02
LIG1-206ENST00000594067 OR4N2Q8NGD1 307 aa15.17■□□□□ 0.02
LIG1-206ENST00000594067 HERVK_113Q902F9 699 aa15.17■□□□□ 0.02
LIG1-206ENST00000594067 PELI1Q96FA3 418 aa15.17■□□□□ 0.02
LIG1-206ENST00000594067 RADILQ96JH8 1075 aa15.17■□□□□ 0.02
LIG1-206ENST00000594067 BEX1Q9HBH7 125 aa15.17■□□□□ 0.02
LIG1-206ENST00000594067 C14orf105Q9NVL8 296 aa15.17■□□□□ 0.02
LIG1-206ENST00000594067 ZNF224Q9NZL3 707 aa15.17■□□□□ 0.02
LIG1-206ENST00000594067 NPTNQ9Y639 398 aa15.17■□□□□ 0.02
LIG1-206ENST00000594067 TRABD2BA6NFA1 517 aa15.17■□□□□ 0.02
LIG1-206ENST00000594067 SNTB2Q13425 540 aaKnown RBP15.17■□□□□ 0.02
LIG1-206ENST00000594067 NFATC4Q14934 902 aa15.17■□□□□ 0.02
LIG1-206ENST00000594067 FAM109BQ6ICB4 259 aaPredicted RBP15.17■□□□□ 0.02
LIG1-206ENST00000594067 ARHGAP11AQ6P4F7 1023 aa15.17■□□□□ 0.02
LIG1-206ENST00000594067 PARM1Q6UWI2 310 aa15.17■□□□□ 0.02
LIG1-206ENST00000594067 TEX19Q8NA77 164 aa15.17■□□□□ 0.02
LIG1-206ENST00000594067 OR51Q1Q8NH59 317 aa15.17■□□□□ 0.02
LIG1-206ENST00000594067 RPLP0P6Q8NHW5 317 aa15.17■□□□□ 0.02
LIG1-206ENST00000594067 FGF14Q92915 247 aa15.17■□□□□ 0.02
LIG1-206ENST00000594067 DACT3Q96B18 629 aaPredicted RBP15.17■□□□□ 0.02
LIG1-206ENST00000594067 ORAI1Q96D31 301 aa15.17■□□□□ 0.02
LIG1-206ENST00000594067 WDR92Q96MX6 357 aa15.17■□□□□ 0.02
LIG1-206ENST00000594067 BAIAP2Q9UQB8 552 aa15.17■□□□□ 0.02
LIG1-206ENST00000594067 LRRN3E7EW58 273 aa15.16■□□□□ 0.02
LIG1-206ENST00000594067 FLRT2O43155 660 aa15.16■□□□□ 0.02
LIG1-206ENST00000594067 SSNA1O43805 119 aa15.16■□□□□ 0.02
LIG1-206ENST00000594067 TOXO94900 526 aa15.16■□□□□ 0.02
LIG1-206ENST00000594067 SELENOPP49908 381 aa15.16■□□□□ 0.02
LIG1-206ENST00000594067 SRSF5Q13243 272 aaKnown RBP15.16■□□□□ 0.02
LIG1-206ENST00000594067 KLF9Q13886 244 aaPredicted RBP15.16■□□□□ 0.02
LIG1-206ENST00000594067 CDK5R1Q15078 307 aa15.16■□□□□ 0.02
LIG1-206ENST00000594067 ZCCHC12Q6PEW1 402 aa15.16■□□□□ 0.02
LIG1-206ENST00000594067 CA13Q8N1Q1 262 aa15.16■□□□□ 0.02
LIG1-206ENST00000594067 OR56B4Q8NH76 319 aa15.16■□□□□ 0.02
LIG1-206ENST00000594067 SLC2A12Q8TD20 617 aa15.16■□□□□ 0.02
LIG1-206ENST00000594067 OR14A2Q96R54 314 aa15.16■□□□□ 0.02
LIG1-206ENST00000594067 LRRN3Q9H3W5 708 aa15.16■□□□□ 0.02
LIG1-206ENST00000594067 IER3IP1Q9Y5U9 82 aa15.16■□□□□ 0.02
LIG1-206ENST00000594067 TRAV1-2A0A0B4J238 106 aa15.16■□□□□ 0.02
LIG1-206ENST00000594067 IMPA2O14732 288 aa15.16■□□□□ 0.02
LIG1-206ENST00000594067 CBX7O95931 251 aa15.16■□□□□ 0.02
LIG1-206ENST00000594067 AK1P00568 194 aa15.16■□□□□ 0.02
LIG1-206ENST00000594067 PSMB10P40306 273 aa15.16■□□□□ 0.02
LIG1-206ENST00000594067 ACAA2P42765 397 aaKnown RBP15.16■□□□□ 0.02
LIG1-206ENST00000594067 KIAA1024LP59773 190 aa15.16■□□□□ 0.02
LIG1-206ENST00000594067 PITPNAQ00169 270 aa15.16■□□□□ 0.02
LIG1-206ENST00000594067 POU4F2Q12837 409 aa15.16■□□□□ 0.02
LIG1-206ENST00000594067 SEZ6L2Q6UXD5 910 aa15.16■□□□□ 0.02
LIG1-206ENST00000594067 SFTPA2Q8IWL1 248 aa15.16■□□□□ 0.02
LIG1-206ENST00000594067 OR2T35Q8NGX2 323 aa15.16■□□□□ 0.02
LIG1-206ENST00000594067 ZNRF4Q8WWF5 429 aa15.16■□□□□ 0.02
LIG1-206ENST00000594067 BMFQ96LC9 184 aa15.16■□□□□ 0.02
LIG1-206ENST00000594067 ARPC5LQ9BPX5 153 aa15.16■□□□□ 0.02
LIG1-206ENST00000594067 PDCD1LG2Q9BQ51 273 aa15.16■□□□□ 0.02
LIG1-206ENST00000594067 C7orf50Q9BRJ6 194 aaKnown RBP15.16■□□□□ 0.02
LIG1-206ENST00000594067 RBCK1Q9BYM8 510 aa15.16■□□□□ 0.02
LIG1-206ENST00000594067 GSX2Q9BZM3 304 aa15.16■□□□□ 0.02
LIG1-206ENST00000594067 DNAJB12Q9NXW2 375 aaKnown RBP15.16■□□□□ 0.02
LIG1-206ENST00000594067 GNG8Q9UK08 70 aa15.16■□□□□ 0.02
LIG1-206ENST00000594067 FKBP7Q9Y680 259 aa15.16■□□□□ 0.02
LIG1-206ENST00000594067 OGG1O15527 345 aa15.15■□□□□ 0.02
LIG1-206ENST00000594067 SERPINA3P01011 423 aa15.15■□□□□ 0.02
LIG1-206ENST00000594067 IGKV1D-16P01601 117 aa15.15■□□□□ 0.02
LIG1-206ENST00000594067 NTSR1P30989 418 aa15.15■□□□□ 0.02
LIG1-206ENST00000594067 GBX2P52951 348 aaPredicted RBP15.15■□□□□ 0.02
LIG1-206ENST00000594067 TMEM31Q5JXX7 168 aa15.15■□□□□ 0.02
LIG1-206ENST00000594067 GALNT11Q8NCW6 608 aa15.15■□□□□ 0.02
LIG1-206ENST00000594067 FAM131CQ96AQ9 280 aa15.15■□□□□ 0.02
LIG1-206ENST00000594067 ANKRD9Q96BM1 317 aaPredicted RBP15.15■□□□□ 0.02
LIG1-206ENST00000594067 SMIM19Q96E16 107 aa15.15■□□□□ 0.02
LIG1-206ENST00000594067 MYADMQ96S97 322 aa15.15■□□□□ 0.02
LIG1-206ENST00000594067 ZNF436Q9C0F3 470 aaPredicted RBP15.15■□□□□ 0.02
LIG1-206ENST00000594067 ACTR6Q9GZN1 396 aa15.15■□□□□ 0.02
LIG1-206ENST00000594067 FBXL21Q9UKT6 434 aa15.15■□□□□ 0.02
LIG1-206ENST00000594067 PCOLCE2Q9UKZ9 415 aa15.15■□□□□ 0.02
LIG1-206ENST00000594067 ADAM18Q9Y3Q7 739 aa15.15■□□□□ 0.02
LIG1-206ENST00000594067 A6NCN8 305 aa15.15■□□□□ 0.02
LIG1-206ENST00000594067 MCIDASD6RGH6 385 aa15.15■□□□□ 0.02
LIG1-206ENST00000594067 NKX2-2O95096 273 aa15.15■□□□□ 0.02
LIG1-206ENST00000594067 RPS11P62280 158 aaKnown RBP eCLIP15.15■□□□□ 0.02
LIG1-206ENST00000594067 FAM53BQ14153 422 aa15.15■□□□□ 0.02
LIG1-206ENST00000594067 GXYLT1Q4G148 440 aa15.15■□□□□ 0.02
LIG1-206ENST00000594067 SLC22A10Q63ZE4 541 aa15.15■□□□□ 0.02
LIG1-206ENST00000594067 NLRC3Q7RTR2 1065 aa15.15■□□□□ 0.02
LIG1-206ENST00000594067 HDDC2Q7Z4H3 204 aa15.15■□□□□ 0.02
LIG1-206ENST00000594067 UBE2Q1Q7Z7E8 422 aa15.15■□□□□ 0.02
LIG1-206ENST00000594067 ADGRG3Q86Y34 549 aa15.15■□□□□ 0.02
LIG1-206ENST00000594067 GRAMD2AQ8IUY3 354 aa15.15■□□□□ 0.02
LIG1-206ENST00000594067 ZNF527Q8NB42 609 aa15.15■□□□□ 0.02
LIG1-206ENST00000594067 ZNF671Q8TAW3 534 aa15.15■□□□□ 0.02
LIG1-206ENST00000594067 SNX33Q8WV41 574 aa15.15■□□□□ 0.02
LIG1-206ENST00000594067 CNN2Q99439 309 aaKnown RBP15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms