RNA–Protein interactions for RNA: ENST00000590887.5

PTBP1-216, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 3

Gene PTBP1, Length 642 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-216ENST00000590887 TMED1Q13445 227 aa11.78□□□□□ -0.52
PTBP1-216ENST00000590887 TOMM34Q15785 309 aaPredicted RBP11.78□□□□□ -0.52
PTBP1-216ENST00000590887 CTU2Q2VPK5 515 aaKnown RBP11.78□□□□□ -0.52
PTBP1-216ENST00000590887 PLPPR5Q32ZL2 321 aa11.78□□□□□ -0.52
PTBP1-216ENST00000590887 KLHL22Q53GT1 634 aa11.78□□□□□ -0.52
PTBP1-216ENST00000590887 TMEM201Q5SNT2 666 aa11.78□□□□□ -0.52
PTBP1-216ENST00000590887 PRAMEF20Q5VT98 475 aa11.78□□□□□ -0.52
PTBP1-216ENST00000590887 C1orf140Q5VVS0 124 aa11.78□□□□□ -0.52
PTBP1-216ENST00000590887 TMEM236Q5W0B7 351 aa11.78□□□□□ -0.52
PTBP1-216ENST00000590887 B3GNTL1Q67FW5 361 aaPredicted RBP11.78□□□□□ -0.52
PTBP1-216ENST00000590887 C3orf33Q6P1S2 294 aa11.78□□□□□ -0.52
PTBP1-216ENST00000590887 POMZP3Q6PJE2 187 aa11.78□□□□□ -0.52
PTBP1-216ENST00000590887 ZNF773Q6PK81 442 aa11.78□□□□□ -0.52
PTBP1-216ENST00000590887 Q6ZPB1 254 aaPredicted RBP11.78□□□□□ -0.52
PTBP1-216ENST00000590887 NANOGNBQ7Z5D8 188 aa11.78□□□□□ -0.52
PTBP1-216ENST00000590887 KIF18BQ86Y91 864 aa11.78□□□□□ -0.52
PTBP1-216ENST00000590887 GID4Q8IVV7 300 aa11.78□□□□□ -0.52
PTBP1-216ENST00000590887 LNX2Q8N448 690 aa11.78□□□□□ -0.52
PTBP1-216ENST00000590887 STX19Q8N4C7 294 aa11.78□□□□□ -0.52
PTBP1-216ENST00000590887 TCEANCQ8N8B7 351 aa11.78□□□□□ -0.52
PTBP1-216ENST00000590887 OR13C2Q8NGS9 318 aa11.78□□□□□ -0.52
PTBP1-216ENST00000590887 MFSD8Q8NHS3 518 aa11.78□□□□□ -0.52
PTBP1-216ENST00000590887 CNIH3Q8TBE1 160 aa11.78□□□□□ -0.52
PTBP1-216ENST00000590887 TMEM163Q8TC26 289 aa11.78□□□□□ -0.52
PTBP1-216ENST00000590887 JSRP1Q96MG2 331 aaPredicted RBP11.78□□□□□ -0.52
PTBP1-216ENST00000590887 TNFRSF13CQ96RJ3 184 aa11.78□□□□□ -0.52
PTBP1-216ENST00000590887 MYCBPQ99417 103 aaPredicted RBP11.78□□□□□ -0.52
PTBP1-216ENST00000590887 PIGQQ9BRB3 760 aa11.78□□□□□ -0.52
PTBP1-216ENST00000590887 UBQLN3Q9H347 655 aa11.78□□□□□ -0.52
PTBP1-216ENST00000590887 ZNF226Q9NYT6 803 aa11.78□□□□□ -0.52
PTBP1-216ENST00000590887 VDAC3Q9Y277 283 aa11.78□□□□□ -0.52
PTBP1-216ENST00000590887 TMEM72A0PK05 275 aa11.77□□□□□ -0.53
PTBP1-216ENST00000590887 CLCA1A8K7I4 914 aa11.77□□□□□ -0.53
PTBP1-216ENST00000590887 PTGES3LE9PB15 166 aa11.77□□□□□ -0.53
PTBP1-216ENST00000590887 RGS10O43665 173 aa11.77□□□□□ -0.53
PTBP1-216ENST00000590887 MAN1A2O60476 641 aa11.77□□□□□ -0.53
PTBP1-216ENST00000590887 SMNDC1O75940 238 aaKnown RBP eCLIP11.77□□□□□ -0.536e-7■■■□□ 15.9
PTBP1-216ENST00000590887 TFPIP10646 304 aa11.77□□□□□ -0.53
PTBP1-216ENST00000590887 PEPDP12955 493 aa11.77□□□□□ -0.53
PTBP1-216ENST00000590887 ATP6V1B1P15313 513 aa11.77□□□□□ -0.53
PTBP1-216ENST00000590887 SRD5A2P31213 254 aa11.77□□□□□ -0.53
PTBP1-216ENST00000590887 IDUAP35475 653 aa11.77□□□□□ -0.53
PTBP1-216ENST00000590887 CD96P40200 585 aa11.77□□□□□ -0.53
PTBP1-216ENST00000590887 MVKQ03426 396 aa11.77□□□□□ -0.53
PTBP1-216ENST00000590887 CDC20Q12834 499 aa11.77□□□□□ -0.53
PTBP1-216ENST00000590887 CLN3Q13286 438 aa11.77□□□□□ -0.53
PTBP1-216ENST00000590887 EMC4Q5J8M3 183 aa11.77□□□□□ -0.53
PTBP1-216ENST00000590887 CLEC12AQ5QGZ9 265 aa11.77□□□□□ -0.53
PTBP1-216ENST00000590887 ARMC4Q5T2S8 1044 aa11.77□□□□□ -0.53
PTBP1-216ENST00000590887 BICRALQ6AI39 1079 aa11.77□□□□□ -0.53
PTBP1-216ENST00000590887 GPR139Q6DWJ6 353 aa11.77□□□□□ -0.53
PTBP1-216ENST00000590887 ACSM5Q6NUN0 579 aa11.77□□□□□ -0.53
PTBP1-216ENST00000590887 VASH2Q86V25 355 aa11.77□□□□□ -0.53
PTBP1-216ENST00000590887 SCAIQ8N9R8 606 aa11.77□□□□□ -0.53
PTBP1-216ENST00000590887 WDSUB1Q8N9V3 476 aa11.77□□□□□ -0.53
PTBP1-216ENST00000590887 FAM98AQ8NCA5 519 aaKnown RBP11.77□□□□□ -0.53
PTBP1-216ENST00000590887 OR5J2Q8NH18 312 aa11.77□□□□□ -0.53
PTBP1-216ENST00000590887 C9orf43Q8TAL5 461 aaPredicted RBP11.77□□□□□ -0.53
PTBP1-216ENST00000590887 TM9SF4Q92544 642 aa11.77□□□□□ -0.53
PTBP1-216ENST00000590887 HAS2Q92819 552 aa11.77□□□□□ -0.53
PTBP1-216ENST00000590887 CCDC90BQ9GZT6 254 aa11.77□□□□□ -0.53
PTBP1-216ENST00000590887 FAM192AQ9GZU8 254 aa11.77□□□□□ -0.53
PTBP1-216ENST00000590887 ZFP64Q9NPA5 681 aa11.77□□□□□ -0.53
PTBP1-216ENST00000590887 CHCHD3Q9NX63 227 aaKnown RBP11.77□□□□□ -0.53
PTBP1-216ENST00000590887 GPR83Q9NYM4 423 aa11.77□□□□□ -0.53
PTBP1-216ENST00000590887 HIF3AQ9Y2N7 669 aa11.77□□□□□ -0.53
PTBP1-216ENST00000590887 HDGFL3Q9Y3E1 203 aa11.77□□□□□ -0.53
PTBP1-216ENST00000590887 FRYQ5TBA9 3013 aa11.76□□□□□ -0.53
PTBP1-216ENST00000590887 IGKV1D-42A0A075B6H8 117 aa11.76□□□□□ -0.53
PTBP1-216ENST00000590887 TRAV27A0A087WT01 109 aa11.76□□□□□ -0.53
PTBP1-216ENST00000590887 OR5H15A6NDH6 313 aa11.76□□□□□ -0.53
PTBP1-216ENST00000590887 PRR23D1E9PI22 279 aaPredicted RBP11.76□□□□□ -0.53
PTBP1-216ENST00000590887 BLOC1S5-TXNDC5H3BN57 136 aa11.76□□□□□ -0.53
PTBP1-216ENST00000590887 ADAM10O14672 748 aa11.76□□□□□ -0.53
PTBP1-216ENST00000590887 ARPC3O15145 178 aa11.76□□□□□ -0.53
PTBP1-216ENST00000590887 SURF4O15260 269 aa11.76□□□□□ -0.53
PTBP1-216ENST00000590887 PRODHO43272 600 aa11.76□□□□□ -0.53
PTBP1-216ENST00000590887 SEC14L5O43304 696 aa11.76□□□□□ -0.53
PTBP1-216ENST00000590887 TRIM3O75382 744 aaPredicted RBP11.76□□□□□ -0.53
PTBP1-216ENST00000590887 WBP4O75554 376 aaKnown RBP11.76□□□□□ -0.53
PTBP1-216ENST00000590887 ASAH2BP0C7U1 165 aa11.76□□□□□ -0.53
PTBP1-216ENST00000590887 PRR23D2P0DMB1 279 aaPredicted RBP11.76□□□□□ -0.53
PTBP1-216ENST00000590887 PIPP12273 146 aaPredicted RBP11.76□□□□□ -0.53
PTBP1-216ENST00000590887 GABRB1P18505 474 aa11.76□□□□□ -0.53
PTBP1-216ENST00000590887 FMO3P31513 532 aa11.76□□□□□ -0.53
PTBP1-216ENST00000590887 RPS5P46782 204 aaKnown RBP11.76□□□□□ -0.53
PTBP1-216ENST00000590887 ARG2P78540 354 aa11.76□□□□□ -0.53
PTBP1-216ENST00000590887 LSM11P83369 360 aaKnown RBP eCLIP11.76□□□□□ -0.531e-6■■■□□ 17.6
PTBP1-216ENST00000590887 LGALS3BPQ08380 585 aa11.76□□□□□ -0.53
PTBP1-216ENST00000590887 FOXF1Q12946 379 aa11.76□□□□□ -0.53
PTBP1-216ENST00000590887 PMS2P3Q13401 168 aa11.76□□□□□ -0.53
PTBP1-216ENST00000590887 TUBA3CQ13748 450 aa11.76□□□□□ -0.53
PTBP1-216ENST00000590887 TOMM20Q15388 145 aa11.76□□□□□ -0.53
PTBP1-216ENST00000590887 OR1C1Q15619 314 aa11.76□□□□□ -0.53
PTBP1-216ENST00000590887 SGCBQ16585 318 aa11.76□□□□□ -0.53
PTBP1-216ENST00000590887 ALG10Q5BKT4 473 aa11.76□□□□□ -0.53
PTBP1-216ENST00000590887 PDSS1Q5T2R2 415 aa11.76□□□□□ -0.53
PTBP1-216ENST00000590887 NXNL2Q5VZ03 156 aa11.76□□□□□ -0.53
PTBP1-216ENST00000590887 SLC25A25Q6KCM7 469 aa11.76□□□□□ -0.53
PTBP1-216ENST00000590887 TUBA3EQ6PEY2 450 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms