RNA–Protein interactions for RNA: ENST00000589117.5

ZNF540-206, Transcript of zinc finger protein 540, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ZNF540, Length 2,349 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-206ENST00000589117 YES1P07947 543 aa6.8□□□□□ -1.32
ZNF540-206ENST00000589117 PNMTP11086 282 aa6.8□□□□□ -1.32
ZNF540-206ENST00000589117 SNRPBP14678 240 aaKnown RBP6.8□□□□□ -1.32
ZNF540-206ENST00000589117 ST6GAL1P15907 406 aa6.8□□□□□ -1.32
ZNF540-206ENST00000589117 PTNP21246 168 aa6.8□□□□□ -1.32
ZNF540-206ENST00000589117 RBMS1P29558 406 aaKnown RBP6.8□□□□□ -1.32
ZNF540-206ENST00000589117 GALNSP34059 522 aa6.8□□□□□ -1.32
ZNF540-206ENST00000589117 HOXD12P35452 270 aa6.8□□□□□ -1.32
ZNF540-206ENST00000589117 CD79BP40259 229 aa6.8□□□□□ -1.32
ZNF540-206ENST00000589117 PITPNBP48739 271 aa6.8□□□□□ -1.32
ZNF540-206ENST00000589117 EMDP50402 254 aa6.8□□□□□ -1.32
ZNF540-206ENST00000589117 HSD17B7P56937 341 aa6.8□□□□□ -1.32
ZNF540-206ENST00000589117 SLC3A1Q07837 685 aa6.8□□□□□ -1.32
ZNF540-206ENST00000589117 CRMP1Q14194 572 aa6.8□□□□□ -1.32
ZNF540-206ENST00000589117 FGFBP1Q14512 234 aa6.8□□□□□ -1.32
ZNF540-206ENST00000589117 TCTE1Q5JU00 501 aa6.8□□□□□ -1.32
ZNF540-206ENST00000589117 ATAD3CQ5T2N8 411 aa6.8□□□□□ -1.32
ZNF540-206ENST00000589117 DPY19L2P2Q6ZN68 376 aa6.8□□□□□ -1.32
ZNF540-206ENST00000589117 C1orf229Q6ZS94 237 aaPredicted RBP6.8□□□□□ -1.32
ZNF540-206ENST00000589117 ABHD4Q8TB40 342 aa6.8□□□□□ -1.32
ZNF540-206ENST00000589117 HAVCR2Q8TDQ0 301 aa6.8□□□□□ -1.32
ZNF540-206ENST00000589117 SNX33Q8WV41 574 aa6.8□□□□□ -1.32
ZNF540-206ENST00000589117 PHYHIPQ92561 330 aa6.8□□□□□ -1.32
ZNF540-206ENST00000589117 TOE1Q96GM8 510 aaKnown RBP6.8□□□□□ -1.32
ZNF540-206ENST00000589117 C4orf36Q96KX1 117 aa6.8□□□□□ -1.32
ZNF540-206ENST00000589117 TMEM43Q9BTV4 400 aa6.8□□□□□ -1.32
ZNF540-206ENST00000589117 MEPEQ9NQ76 525 aaPredicted RBP6.8□□□□□ -1.32
ZNF540-206ENST00000589117 CYSLTR2Q9NS75 346 aa6.8□□□□□ -1.32
ZNF540-206ENST00000589117 STARD5Q9NSY2 213 aa6.8□□□□□ -1.32
ZNF540-206ENST00000589117 ING3Q9NXR8 418 aa6.8□□□□□ -1.32
ZNF540-206ENST00000589117 EXTL2Q9UBQ6 330 aa6.8□□□□□ -1.32
ZNF540-206ENST00000589117 ZNF337Q9Y3M9 751 aa6.8□□□□□ -1.32
ZNF540-206ENST00000589117 A0A0A6YYC8 382 aaPredicted RBP6.79□□□□□ -1.32
ZNF540-206ENST00000589117 I3L1I5 382 aaPredicted RBP6.79□□□□□ -1.32
ZNF540-206ENST00000589117 ZNF749O43361 778 aa6.79□□□□□ -1.32
ZNF540-206ENST00000589117 SSX4O60224 188 aa6.79□□□□□ -1.32
ZNF540-206ENST00000589117 ZNF217O75362 1048 aa6.79□□□□□ -1.32
ZNF540-206ENST00000589117 GATBO75879 557 aaKnown RBP6.79□□□□□ -1.32
ZNF540-206ENST00000589117 PPP1R3DO95685 299 aa6.79□□□□□ -1.32
ZNF540-206ENST00000589117 IFNA16P05015 189 aa6.79□□□□□ -1.32
ZNF540-206ENST00000589117 IGHV4-34P06331 123 aa6.79□□□□□ -1.32
ZNF540-206ENST00000589117 PYCR1P32322 319 aa6.79□□□□□ -1.32
ZNF540-206ENST00000589117 ACAA2P42765 397 aaKnown RBP6.79□□□□□ -1.32
ZNF540-206ENST00000589117 GRK6P43250 576 aa6.79□□□□□ -1.32
ZNF540-206ENST00000589117 GFRA1P56159 465 aa6.79□□□□□ -1.32
ZNF540-206ENST00000589117 FXYD6P3P58550 94 aa6.79□□□□□ -1.32
ZNF540-206ENST00000589117 HSF2Q03933 536 aa6.79□□□□□ -1.32
ZNF540-206ENST00000589117 EIF2B5Q13144 721 aaKnown RBP6.79□□□□□ -1.32
ZNF540-206ENST00000589117 FZD2Q14332 565 aa6.79□□□□□ -1.32
ZNF540-206ENST00000589117 ZNF267Q14586 743 aaPredicted RBP6.79□□□□□ -1.32
ZNF540-206ENST00000589117 BCL2A1Q16548 175 aa6.79□□□□□ -1.32
ZNF540-206ENST00000589117 PRTGQ2VWP7 1150 aa6.79□□□□□ -1.32
ZNF540-206ENST00000589117 CCDC58Q4VC31 144 aa6.79□□□□□ -1.32
ZNF540-206ENST00000589117 ACSM3Q53FZ2 586 aa6.79□□□□□ -1.32
ZNF540-206ENST00000589117 ZNF542PQ5EBM4 170 aa6.79□□□□□ -1.32
ZNF540-206ENST00000589117 SLC35D3Q5M8T2 416 aa6.79□□□□□ -1.32
ZNF540-206ENST00000589117 B3GLCTQ6Y288 498 aa6.79□□□□□ -1.32
ZNF540-206ENST00000589117 GKN2Q86XP6 184 aa6.79□□□□□ -1.32
ZNF540-206ENST00000589117 SLC22A18ASQ8N1D0 253 aa6.79□□□□□ -1.32
ZNF540-206ENST00000589117 SYS1Q8N2H4 156 aa6.79□□□□□ -1.32
ZNF540-206ENST00000589117 TMEM99Q8N816 258 aa6.79□□□□□ -1.32
ZNF540-206ENST00000589117 OR52E2Q8NGJ4 325 aa6.79□□□□□ -1.32
ZNF540-206ENST00000589117 DOK4Q8TEW6 326 aa6.79□□□□□ -1.32
ZNF540-206ENST00000589117 VSTM2LQ96N03 204 aa6.79□□□□□ -1.32
ZNF540-206ENST00000589117 PTCHD1Q96NR3 888 aa6.79□□□□□ -1.32
ZNF540-206ENST00000589117 FANCD2OSQ96PS1 177 aa6.79□□□□□ -1.32
ZNF540-206ENST00000589117 CNN2Q99439 309 aaKnown RBP6.79□□□□□ -1.32
ZNF540-206ENST00000589117 SLC38A3Q99624 504 aa6.79□□□□□ -1.32
ZNF540-206ENST00000589117 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.79□□□□□ -1.32
ZNF540-206ENST00000589117 MMP28Q9H239 520 aa6.79□□□□□ -1.32
ZNF540-206ENST00000589117 ERVMER34-1Q9H9K5 563 aa6.79□□□□□ -1.32
ZNF540-206ENST00000589117 UCK1Q9HA47 277 aa6.79□□□□□ -1.32
ZNF540-206ENST00000589117 ADGRL4Q9HBW9 690 aa6.79□□□□□ -1.32
ZNF540-206ENST00000589117 GP6Q9HCN6 339 aa6.79□□□□□ -1.32
ZNF540-206ENST00000589117 CD93Q9NPY3 652 aa6.79□□□□□ -1.32
ZNF540-206ENST00000589117 KLHL1Q9NR64 748 aa6.79□□□□□ -1.32
ZNF540-206ENST00000589117 EPHA6Q9UF33 1036 aa6.79□□□□□ -1.32
ZNF540-206ENST00000589117 PLCL2Q9UPR0 1127 aa6.79□□□□□ -1.32
ZNF540-206ENST00000589117 N6AMT1Q9Y5N5 214 aa6.79□□□□□ -1.32
ZNF540-206ENST00000589117 ATG2BQ96BY7 2078 aa6.79□□□□□ -1.32
ZNF540-206ENST00000589117 TICRRQ7Z2Z1 1910 aa6.79□□□□□ -1.32
ZNF540-206ENST00000589117 SNRNP200O75643 2136 aaKnown RBP6.79□□□□□ -1.32
ZNF540-206ENST00000589117 C5orf42Q9H799 3197 aa6.79□□□□□ -1.32
ZNF540-206ENST00000589117 A0A087WUJ7 227 aa6.79□□□□□ -1.32
ZNF540-206ENST00000589117 TRAV1-2A0A0B4J238 106 aa6.79□□□□□ -1.32
ZNF540-206ENST00000589117 A0A1W2PPC4 97 aa6.79□□□□□ -1.32
ZNF540-206ENST00000589117 SERINC4A6NH21 518 aa6.79□□□□□ -1.32
ZNF540-206ENST00000589117 SLC9B1P1A6NJY1 282 aa6.79□□□□□ -1.32
ZNF540-206ENST00000589117 B4DGG1 531 aa6.79□□□□□ -1.32
ZNF540-206ENST00000589117 ZNF879B4DU55 563 aa6.79□□□□□ -1.32
ZNF540-206ENST00000589117 PLA2G10O15496 165 aa6.79□□□□□ -1.32
ZNF540-206ENST00000589117 ARHGEF9O43307 516 aa6.79□□□□□ -1.32
ZNF540-206ENST00000589117 WISP1O95388 367 aa6.79□□□□□ -1.32
ZNF540-206ENST00000589117 CSF2P04141 144 aa6.79□□□□□ -1.32
ZNF540-206ENST00000589117 CD1AP06126 327 aa6.79□□□□□ -1.32
ZNF540-206ENST00000589117 FUT1P19526 365 aa6.79□□□□□ -1.32
ZNF540-206ENST00000589117 RAB3BP20337 219 aa6.79□□□□□ -1.32
ZNF540-206ENST00000589117 NPR2P20594 1047 aa6.79□□□□□ -1.32
ZNF540-206ENST00000589117 S1PR1P21453 382 aa6.79□□□□□ -1.32
ZNF540-206ENST00000589117 SSTR4P31391 388 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms