RNA–Protein interactions for RNA: ENST00000588867.1

NPC1-207, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 5

Gene NPC1, Length 2,000 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-207ENST00000588867 EGLN3Q9H6Z9 239 aa13.09□□□□□ -0.31
NPC1-207ENST00000588867 FAM118AQ9NWS6 357 aa13.09□□□□□ -0.31
NPC1-207ENST00000588867 REV1Q9UBZ9 1251 aa13.09□□□□□ -0.31
NPC1-207ENST00000588867 MED12Q93074 2177 aa13.09□□□□□ -0.31
NPC1-207ENST00000588867 HPNP05981 417 aa13.08□□□□□ -0.31
NPC1-207ENST00000588867 ZNF17P17021 662 aa13.08□□□□□ -0.31
NPC1-207ENST00000588867 EPHA2P29317 976 aa13.08□□□□□ -0.31
NPC1-207ENST00000588867 SLC10A1Q14973 349 aa13.08□□□□□ -0.31
NPC1-207ENST00000588867 ZNF74Q16587 644 aa13.08□□□□□ -0.31
NPC1-207ENST00000588867 HYAL4Q2M3T9 481 aa13.08□□□□□ -0.31
NPC1-207ENST00000588867 TMEM176BQ3YBM2 270 aaPredicted RBP13.08□□□□□ -0.31
NPC1-207ENST00000588867 SYT14P1Q58G82 188 aa13.08□□□□□ -0.31
NPC1-207ENST00000588867 CD300LDQ6UXZ3 194 aa13.08□□□□□ -0.31
NPC1-207ENST00000588867 Q6ZPB1 254 aaPredicted RBP13.08□□□□□ -0.31
NPC1-207ENST00000588867 Q6ZS92 163 aa13.08□□□□□ -0.31
NPC1-207ENST00000588867 PARP8Q8N3A8 854 aa13.08□□□□□ -0.31
NPC1-207ENST00000588867 OR13C2Q8NGS9 318 aa13.08□□□□□ -0.31
NPC1-207ENST00000588867 DEFB127Q9H1M4 99 aa13.08□□□□□ -0.31
NPC1-207ENST00000588867 NANSQ9NR45 359 aa13.08□□□□□ -0.31
NPC1-207ENST00000588867 ENOPH1Q9UHY7 261 aa13.08□□□□□ -0.31
NPC1-207ENST00000588867 SLC6A5Q9Y345 797 aa13.08□□□□□ -0.31
NPC1-207ENST00000588867 AP4B1Q9Y6B7 739 aa13.08□□□□□ -0.31
NPC1-207ENST00000588867 TRAV27A0A087WT01 109 aa13.08□□□□□ -0.32
NPC1-207ENST00000588867 NPIPB7O75200 414 aa13.08□□□□□ -0.32
NPC1-207ENST00000588867 OR7A10O76100 309 aa13.08□□□□□ -0.32
NPC1-207ENST00000588867 CRISP1P54107 249 aa13.08□□□□□ -0.32
NPC1-207ENST00000588867 B3GALT5-AS1P59052 145 aa13.08□□□□□ -0.32
NPC1-207ENST00000588867 LTBQ06643 244 aa13.08□□□□□ -0.32
NPC1-207ENST00000588867 LINC00303Q3SY05 128 aa13.08□□□□□ -0.32
NPC1-207ENST00000588867 RNFT1Q5M7Z0 435 aa13.08□□□□□ -0.32
NPC1-207ENST00000588867 WLSQ5T9L3 541 aa13.08□□□□□ -0.32
NPC1-207ENST00000588867 C5orf46Q6UWT4 87 aa13.08□□□□□ -0.32
NPC1-207ENST00000588867 RASSF6Q6ZTQ3 369 aa13.08□□□□□ -0.32
NPC1-207ENST00000588867 KIF18BQ86Y91 864 aa13.08□□□□□ -0.32
NPC1-207ENST00000588867 FAM109AQ8N4B1 249 aa13.08□□□□□ -0.32
NPC1-207ENST00000588867 OR5B2Q96R09 309 aa13.08□□□□□ -0.32
NPC1-207ENST00000588867 TNFRSF13CQ96RJ3 184 aa13.08□□□□□ -0.32
NPC1-207ENST00000588867 IL20RAQ9UHF4 553 aa13.08□□□□□ -0.32
NPC1-207ENST00000588867 RAB26Q9ULW5 256 aa13.08□□□□□ -0.32
NPC1-207ENST00000588867 B3GNT3Q9Y2A9 372 aa13.08□□□□□ -0.32
NPC1-207ENST00000588867 LRRC42Q9Y546 428 aa13.08□□□□□ -0.32
NPC1-207ENST00000588867 A0A1W2PNR3 127 aa13.07□□□□□ -0.32
NPC1-207ENST00000588867 HTR3EA5X5Y0 456 aa13.07□□□□□ -0.32
NPC1-207ENST00000588867 OR2T1O43869 369 aa13.07□□□□□ -0.32
NPC1-207ENST00000588867 CLIC3O95833 236 aa13.07□□□□□ -0.32
NPC1-207ENST00000588867 HIST1H2ABP04908 130 aa13.07□□□□□ -0.32
NPC1-207ENST00000588867 CHMP24386 653 aa13.07□□□□□ -0.32
NPC1-207ENST00000588867 ELK4P28324 431 aa13.07□□□□□ -0.32
NPC1-207ENST00000588867 SHC1P29353 583 aa13.07□□□□□ -0.32
NPC1-207ENST00000588867 ESRRGP62508 458 aa13.07□□□□□ -0.32
NPC1-207ENST00000588867 FAM69AQ5T7M9 428 aa13.07□□□□□ -0.32
NPC1-207ENST00000588867 SLC6A19Q695T7 634 aa13.07□□□□□ -0.32
NPC1-207ENST00000588867 HIST3H2AQ7L7L0 130 aa13.07□□□□□ -0.32
NPC1-207ENST00000588867 SLC46A3Q7Z3Q1 461 aa13.07□□□□□ -0.32
NPC1-207ENST00000588867 SLC25A43Q8WUT9 341 aaPredicted RBP13.07□□□□□ -0.32
NPC1-207ENST00000588867 TFAP2CQ92754 450 aa13.07□□□□□ -0.32
NPC1-207ENST00000588867 HIST1H2ACQ93077 130 aa13.07□□□□□ -0.32
NPC1-207ENST00000588867 PTDSS2Q9BVG9 487 aa13.07□□□□□ -0.32
NPC1-207ENST00000588867 GABARAPL3Q9BY60 117 aa13.07□□□□□ -0.32
NPC1-207ENST00000588867 SLC6A15Q9H2J7 730 aa13.07□□□□□ -0.32
NPC1-207ENST00000588867 LDAHQ9H6V9 325 aa13.07□□□□□ -0.32
NPC1-207ENST00000588867 LUZP4Q9P127 313 aa13.07□□□□□ -0.32
NPC1-207ENST00000588867 LOC100130705A0A1B0GUX0 176 aa13.06□□□□□ -0.32
NPC1-207ENST00000588867 BLOC1S5-TXNDC5H3BN57 136 aa13.06□□□□□ -0.32
NPC1-207ENST00000588867 TFECO14948 347 aaPredicted RBP13.06□□□□□ -0.32
NPC1-207ENST00000588867 IGF2P01344 180 aa13.06□□□□□ -0.32
NPC1-207ENST00000588867 BGLAPP02818 100 aa13.06□□□□□ -0.32
NPC1-207ENST00000588867 TP53P04637 393 aaPredicted RBP13.06□□□□□ -0.32
NPC1-207ENST00000588867 ZNF24P17028 368 aa13.06□□□□□ -0.32
NPC1-207ENST00000588867 FKBP2P26885 142 aaKnown RBP13.06□□□□□ -0.32
NPC1-207ENST00000588867 IDUAP35475 653 aa13.06□□□□□ -0.32
NPC1-207ENST00000588867 CAPGP40121 348 aa13.06□□□□□ -0.32
NPC1-207ENST00000588867 STARP49675 285 aa13.06□□□□□ -0.32
NPC1-207ENST00000588867 RAC1P63000 192 aa13.06□□□□□ -0.32
NPC1-207ENST00000588867 MYBPHQ13203 477 aa13.06□□□□□ -0.32
NPC1-207ENST00000588867 PTGES3Q15185 160 aaKnown RBP13.06□□□□□ -0.32
NPC1-207ENST00000588867 TAF11Q15544 211 aa13.06□□□□□ -0.32
NPC1-207ENST00000588867 OR7A5Q15622 319 aa13.06□□□□□ -0.32
NPC1-207ENST00000588867 PLEKHN1Q494U1 663 aaPredicted RBP13.06□□□□□ -0.32
NPC1-207ENST00000588867 ZBED5Q49AG3 693 aa13.06□□□□□ -0.32
NPC1-207ENST00000588867 GXYLT1Q4G148 440 aa13.06□□□□□ -0.32
NPC1-207ENST00000588867 TMEM236Q5W0B7 351 aa13.06□□□□□ -0.32
NPC1-207ENST00000588867 TTC23Q5W5X9 447 aa13.06□□□□□ -0.32
NPC1-207ENST00000588867 C9orf43Q8TAL5 461 aaPredicted RBP13.06□□□□□ -0.32
NPC1-207ENST00000588867 FANK1Q8TC84 345 aa13.06□□□□□ -0.32
NPC1-207ENST00000588867 ZNF570Q96NI8 536 aa13.06□□□□□ -0.32
NPC1-207ENST00000588867 TAPBPLQ9BX59 468 aa13.06□□□□□ -0.32
NPC1-207ENST00000588867 POTEKPQ9BYX7 375 aa13.06□□□□□ -0.32
NPC1-207ENST00000588867 PLA2G12AQ9BZM1 189 aa13.06□□□□□ -0.32
NPC1-207ENST00000588867 GRIP2Q9C0E4 1043 aa13.06□□□□□ -0.32
NPC1-207ENST00000588867 TSPAN10Q9H1Z9 355 aaPredicted RBP13.06□□□□□ -0.32
NPC1-207ENST00000588867 ADNPQ9H2P0 1102 aa13.06□□□□□ -0.32
NPC1-207ENST00000588867 EXO5Q9H790 373 aa13.06□□□□□ -0.32
NPC1-207ENST00000588867 QPCTLQ9NXS2 382 aa13.06□□□□□ -0.32
NPC1-207ENST00000588867 ZMIZ1Q9ULJ6 1067 aa13.06□□□□□ -0.32
NPC1-207ENST00000588867 SIGLEC7Q9Y286 467 aa13.06□□□□□ -0.32
NPC1-207ENST00000588867 H0YAE9 185 aa13.06□□□□□ -0.32
NPC1-207ENST00000588867 HCN1O60741 890 aa13.06□□□□□ -0.32
NPC1-207ENST00000588867 BMP7P18075 431 aa13.06□□□□□ -0.32
NPC1-207ENST00000588867 GTF2E2P29084 291 aaKnown RBP13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms