RNA–Protein interactions for RNA: ENST00000587256.1

ATG4D-207, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-207ENST00000587256 A0A1B0GWA3 101 aa13.16□□□□□ -0.3
ATG4D-207ENST00000587256 LIPT2A6NK58 231 aa13.16□□□□□ -0.3
ATG4D-207ENST00000587256 ZNF716A6NP11 495 aa13.16□□□□□ -0.3
ATG4D-207ENST00000587256 TMEM229AB2RXF0 380 aa13.16□□□□□ -0.3
ATG4D-207ENST00000587256 ZNF814B7Z6K7 855 aa13.16□□□□□ -0.3
ATG4D-207ENST00000587256 GPR171O14626 319 aa13.16□□□□□ -0.3
ATG4D-207ENST00000587256 MFN2O95140 757 aa13.16□□□□□ -0.3
ATG4D-207ENST00000587256 AHSA1O95433 338 aa13.16□□□□□ -0.3
ATG4D-207ENST00000587256 PPP3CBP16298 524 aa13.16□□□□□ -0.3
ATG4D-207ENST00000587256 IL32P24001 234 aa13.16□□□□□ -0.3
ATG4D-207ENST00000587256 HTR2AP28223 471 aa13.16□□□□□ -0.3
ATG4D-207ENST00000587256 OR3A2P47893 321 aa13.16□□□□□ -0.3
ATG4D-207ENST00000587256 SEC24CP53992 1094 aa13.16□□□□□ -0.3
ATG4D-207ENST00000587256 CEACAM7Q14002 265 aa13.16□□□□□ -0.3
ATG4D-207ENST00000587256 PDK3Q15120 406 aa13.16□□□□□ -0.3
ATG4D-207ENST00000587256 VMACQ2NL98 169 aa13.16□□□□□ -0.3
ATG4D-207ENST00000587256 C1orf140Q5VVS0 124 aa13.16□□□□□ -0.3
ATG4D-207ENST00000587256 STAC2Q6ZMT1 411 aa13.16□□□□□ -0.3
ATG4D-207ENST00000587256 CXorf67Q86X51 503 aaPredicted RBP13.16□□□□□ -0.3
ATG4D-207ENST00000587256 CDC20BQ86Y33 519 aa13.16□□□□□ -0.3
ATG4D-207ENST00000587256 CCDC103Q8IW40 242 aa13.16□□□□□ -0.3
ATG4D-207ENST00000587256 RP9Q8TA86 221 aaKnown RBP13.16□□□□□ -0.3
ATG4D-207ENST00000587256 RNF217Q8TC41 542 aa13.16□□□□□ -0.3
ATG4D-207ENST00000587256 NRGNQ92686 78 aa13.16□□□□□ -0.3
ATG4D-207ENST00000587256 ELAC2Q9BQ52 826 aaKnown RBP13.16□□□□□ -0.3
ATG4D-207ENST00000587256 RSPO3Q9BXY4 272 aaPredicted RBP13.16□□□□□ -0.3
ATG4D-207ENST00000587256 POTEKPQ9BYX7 375 aa13.16□□□□□ -0.3
ATG4D-207ENST00000587256 ACTR6Q9GZN1 396 aa13.16□□□□□ -0.3
ATG4D-207ENST00000587256 ADPRHL2Q9NX46 363 aa13.16□□□□□ -0.3
ATG4D-207ENST00000587256 NOSIPQ9Y314 301 aaKnown RBP13.16□□□□□ -0.3
ATG4D-207ENST00000587256 FAM221AA4D161 298 aa13.15□□□□□ -0.3
ATG4D-207ENST00000587256 M0R3H8 397 aa13.15□□□□□ -0.3
ATG4D-207ENST00000587256 RAMP1O60894 148 aa13.15□□□□□ -0.3
ATG4D-207ENST00000587256 COX4I1P13073 169 aa13.15□□□□□ -0.3
ATG4D-207ENST00000587256 PSMB1P20618 241 aaKnown RBP13.15□□□□□ -0.3
ATG4D-207ENST00000587256 GTF2E2P29084 291 aaKnown RBP13.15□□□□□ -0.3
ATG4D-207ENST00000587256 LSP1P33241 339 aa13.15□□□□□ -0.3
ATG4D-207ENST00000587256 ALG10BQ5I7T1 473 aa13.15□□□□□ -0.3
ATG4D-207ENST00000587256 OTUD3Q5T2D3 398 aaPredicted RBP13.15□□□□□ -0.3
ATG4D-207ENST00000587256 PAQR6Q6TCH4 344 aa13.15□□□□□ -0.3
ATG4D-207ENST00000587256 CASP12Q6UXS9 341 aa13.15□□□□□ -0.3
ATG4D-207ENST00000587256 CPLX4Q7Z7G2 160 aa13.15□□□□□ -0.3
ATG4D-207ENST00000587256 GABRG1Q8N1C3 465 aa13.15□□□□□ -0.3
ATG4D-207ENST00000587256 DNAJA4Q8WW22 397 aaPredicted RBP13.15□□□□□ -0.3
ATG4D-207ENST00000587256 APH1AQ96BI3 265 aa13.15□□□□□ -0.3
ATG4D-207ENST00000587256 EVA1AQ9H8M9 152 aa13.15□□□□□ -0.3
ATG4D-207ENST00000587256 TMEM27Q9HBJ8 222 aa13.15□□□□□ -0.3
ATG4D-207ENST00000587256 C6orf203Q9P0P8 240 aaPredicted RBP13.15□□□□□ -0.3
ATG4D-207ENST00000587256 PRSS50Q9UI38 385 aa13.15□□□□□ -0.3
ATG4D-207ENST00000587256 ITGB1BP2Q9UKP3 347 aa13.15□□□□□ -0.3
ATG4D-207ENST00000587256 SLC9A8Q9Y2E8 581 aa13.15□□□□□ -0.3
ATG4D-207ENST00000587256 GPR52Q9Y2T5 361 aa13.15□□□□□ -0.3
ATG4D-207ENST00000587256 SPG11Q96JI7 2443 aa13.15□□□□□ -0.3
ATG4D-207ENST00000587256 PDZD2O15018 2839 aa13.14□□□□□ -0.31
ATG4D-207ENST00000587256 ENO4A6NNW6 628 aa13.14□□□□□ -0.31
ATG4D-207ENST00000587256 M0QX08 132 aa13.14□□□□□ -0.31
ATG4D-207ENST00000587256 AIM2O14862 343 aa13.14□□□□□ -0.31
ATG4D-207ENST00000587256 GCM2O75603 506 aaPredicted RBP13.14□□□□□ -0.31
ATG4D-207ENST00000587256 AKR7A3O95154 331 aa13.14□□□□□ -0.31
ATG4D-207ENST00000587256 ADAP00813 363 aa13.14□□□□□ -0.31
ATG4D-207ENST00000587256 HRGP04196 525 aa13.14□□□□□ -0.31
ATG4D-207ENST00000587256 PNMTP11086 282 aa13.14□□□□□ -0.31
ATG4D-207ENST00000587256 CRYGSP22914 178 aa13.14□□□□□ -0.31
ATG4D-207ENST00000587256 GZMMP51124 257 aa13.14□□□□□ -0.31
ATG4D-207ENST00000587256 SLC16A1P53985 500 aa13.14□□□□□ -0.31
ATG4D-207ENST00000587256 GYS2P54840 703 aa13.14□□□□□ -0.31
ATG4D-207ENST00000587256 GNGT1P63211 74 aa13.14□□□□□ -0.31
ATG4D-207ENST00000587256 H3F3AP84243 136 aa13.14□□□□□ -0.31
ATG4D-207ENST00000587256 ERICH5Q6P6B1 374 aa13.14□□□□□ -0.31
ATG4D-207ENST00000587256 ULK3Q6PHR2 472 aa13.14□□□□□ -0.31
ATG4D-207ENST00000587256 C6orf89Q6UWU4 347 aa13.14□□□□□ -0.31
ATG4D-207ENST00000587256 Q6ZT83 130 aa13.14□□□□□ -0.31
ATG4D-207ENST00000587256 ARPINQ7Z6K5 226 aa13.14□□□□□ -0.31
ATG4D-207ENST00000587256 GPAT4Q86UL3 456 aa13.14□□□□□ -0.31
ATG4D-207ENST00000587256 UBE2J2Q8N2K1 259 aa13.14□□□□□ -0.31
ATG4D-207ENST00000587256 LSMEM1Q8N8F7 131 aa13.14□□□□□ -0.31
ATG4D-207ENST00000587256 STEAP2Q8NFT2 490 aa13.14□□□□□ -0.31
ATG4D-207ENST00000587256 VANGL1Q8TAA9 524 aaPredicted RBP13.14□□□□□ -0.31
ATG4D-207ENST00000587256 STK35Q8TDR2 534 aa13.14□□□□□ -0.31
ATG4D-207ENST00000587256 RASSF5Q8WWW0 418 aa13.14□□□□□ -0.31
ATG4D-207ENST00000587256 KISS1RQ969F8 398 aaPredicted RBP13.14□□□□□ -0.31
ATG4D-207ENST00000587256 TAMM41Q96BW9 452 aa13.14□□□□□ -0.31
ATG4D-207ENST00000587256 PIK3IP1Q96FE7 263 aa13.14□□□□□ -0.31
ATG4D-207ENST00000587256 ARHGDIGQ99819 225 aa13.14□□□□□ -0.31
ATG4D-207ENST00000587256 PRR14Q9BWN1 585 aa13.14□□□□□ -0.31
ATG4D-207ENST00000587256 C12orf10Q9HB07 376 aa13.14□□□□□ -0.31
ATG4D-207ENST00000587256 MPDZO75970 2070 aa13.14□□□□□ -0.31
ATG4D-207ENST00000587256 CSMD2Q7Z408 3487 aa13.14□□□□□ -0.31
ATG4D-207ENST00000587256 AQP7P3A6NL99 342 aa13.13□□□□□ -0.31
ATG4D-207ENST00000587256 FAM220BPB1ANY3 271 aa13.13□□□□□ -0.31
ATG4D-207ENST00000587256 DYNC1I1O14576 645 aa13.13□□□□□ -0.31
ATG4D-207ENST00000587256 NPIPB7O75200 414 aa13.13□□□□□ -0.31
ATG4D-207ENST00000587256 MRPL33O75394 65 aaKnown RBP13.13□□□□□ -0.31
ATG4D-207ENST00000587256 IGHV3-9P01782 118 aa13.13□□□□□ -0.31
ATG4D-207ENST00000587256 C8BP07358 591 aa13.13□□□□□ -0.31
ATG4D-207ENST00000587256 DRD4P21917 467 aa13.13□□□□□ -0.31
ATG4D-207ENST00000587256 EDNRAP25101 427 aa13.13□□□□□ -0.31
ATG4D-207ENST00000587256 RPS5P46782 204 aaKnown RBP13.13□□□□□ -0.31
ATG4D-207ENST00000587256 P2RY6Q15077 328 aa13.13□□□□□ -0.31
ATG4D-207ENST00000587256 OR1Q1Q15612 314 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms