RNA–Protein interactions for RNA: ENST00000586638.5

APOC1-201, Transcript of apolipoprotein C1, humanhuman

TSL 3 BASIC

Gene APOC1, Length 425 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-201ENST00000586638 NPAS1Q99742 590 aa9.24□□□□□ -0.93
APOC1-201ENST00000586638 TMEM43Q9BTV4 400 aa9.24□□□□□ -0.93
APOC1-201ENST00000586638 POLDIP3Q9BY77 421 aaKnown RBP9.24□□□□□ -0.93
APOC1-201ENST00000586638 B3GNT4Q9C0J1 378 aa9.24□□□□□ -0.93
APOC1-201ENST00000586638 ENKD1Q9H0I2 346 aa9.24□□□□□ -0.93
APOC1-201ENST00000586638 MED11Q9P086 117 aa9.24□□□□□ -0.93
APOC1-201ENST00000586638 PSORS1C1Q9UIG5 152 aa9.24□□□□□ -0.93
APOC1-201ENST00000586638 SIGLEC7Q9Y286 467 aa9.24□□□□□ -0.93
APOC1-201ENST00000586638 GPR52Q9Y2T5 361 aa9.24□□□□□ -0.93
APOC1-201ENST00000586638 SNX5Q9Y5X3 404 aa9.24□□□□□ -0.93
APOC1-201ENST00000586638 CHCHD2Q9Y6H1 151 aaPredicted RBP9.24□□□□□ -0.93
APOC1-201ENST00000586638 UBR5O95071 2799 aaPredicted RBP9.24□□□□□ -0.93
APOC1-201ENST00000586638 NOTCH2Q04721 2471 aa9.23□□□□□ -0.93
APOC1-201ENST00000586638 TMED7-TICAM2A0A0A6YYA0 188 aa9.23□□□□□ -0.93
APOC1-201ENST00000586638 SHISA8B8ZZ34 492 aa9.23□□□□□ -0.93
APOC1-201ENST00000586638 RGS10O43665 173 aa9.23□□□□□ -0.93
APOC1-201ENST00000586638 SLC2A10O95528 541 aa9.23□□□□□ -0.93
APOC1-201ENST00000586638 PPP1R3DO95685 299 aa9.23□□□□□ -0.93
APOC1-201ENST00000586638 ADRA2AP08913 450 aa9.23□□□□□ -0.93
APOC1-201ENST00000586638 CCL3P10147 92 aa9.23□□□□□ -0.93
APOC1-201ENST00000586638 GRK5P34947 590 aa9.23□□□□□ -0.93
APOC1-201ENST00000586638 POLR2HP52434 150 aaKnown RBP9.23□□□□□ -0.93
APOC1-201ENST00000586638 SUMO3P55854 103 aaPredicted RBP9.23□□□□□ -0.93
APOC1-201ENST00000586638 ZNF91Q05481 1191 aa9.23□□□□□ -0.93
APOC1-201ENST00000586638 PMS2P3Q13401 168 aa9.23□□□□□ -0.93
APOC1-201ENST00000586638 FHL1Q13642 323 aa9.23□□□□□ -0.93
APOC1-201ENST00000586638 RAB39AQ14964 217 aa9.23□□□□□ -0.93
APOC1-201ENST00000586638 INPP5JQ15735 1006 aaPredicted RBP9.23□□□□□ -0.93
APOC1-201ENST00000586638 BORAQ6PGQ7 559 aa9.23□□□□□ -0.93
APOC1-201ENST00000586638 SMARCD3Q6STE5 483 aa9.23□□□□□ -0.93
APOC1-201ENST00000586638 OPN5Q6U736 354 aa9.23□□□□□ -0.93
APOC1-201ENST00000586638 OAFQ86UD1 273 aa9.23□□□□□ -0.93
APOC1-201ENST00000586638 IGFN1Q86VF2 1251 aa9.23□□□□□ -0.93
APOC1-201ENST00000586638 RPS19BP1Q86WX3 136 aaKnown RBP9.23□□□□□ -0.93
APOC1-201ENST00000586638 IL22RA1Q8N6P7 574 aa9.23□□□□□ -0.93
APOC1-201ENST00000586638 C10orf53Q8N6V4 93 aa9.23□□□□□ -0.93
APOC1-201ENST00000586638 LRRC17Q8N6Y2 441 aa9.23□□□□□ -0.93
APOC1-201ENST00000586638 OR2T33Q8NG76 320 aa9.23□□□□□ -0.93
APOC1-201ENST00000586638 OR8J1Q8NGP2 316 aa9.23□□□□□ -0.93
APOC1-201ENST00000586638 TMEM163Q8TC26 289 aa9.23□□□□□ -0.93
APOC1-201ENST00000586638 GGHQ92820 318 aa9.23□□□□□ -0.93
APOC1-201ENST00000586638 NKD1Q969G9 470 aa9.23□□□□□ -0.93
APOC1-201ENST00000586638 PLEKHA8Q96JA3 519 aa9.23□□□□□ -0.93
APOC1-201ENST00000586638 ZNF582Q96NG8 517 aaPredicted RBP9.23□□□□□ -0.93
APOC1-201ENST00000586638 MOGAT1Q96PD6 335 aa9.23□□□□□ -0.93
APOC1-201ENST00000586638 SLC38A2Q96QD8 506 aa9.23□□□□□ -0.93
APOC1-201ENST00000586638 COPS4Q9BT78 406 aa9.23□□□□□ -0.93
APOC1-201ENST00000586638 IFT27Q9BW83 186 aa9.23□□□□□ -0.93
APOC1-201ENST00000586638 GPR87Q9BY21 358 aa9.23□□□□□ -0.93
APOC1-201ENST00000586638 PRRG3Q9BZD7 231 aa9.23□□□□□ -0.93
APOC1-201ENST00000586638 ADAM19Q9H013 955 aa9.23□□□□□ -0.93
APOC1-201ENST00000586638 UBQLN3Q9H347 655 aa9.23□□□□□ -0.93
APOC1-201ENST00000586638 DUSP21Q9H596 190 aa9.23□□□□□ -0.93
APOC1-201ENST00000586638 C12orf10Q9HB07 376 aa9.23□□□□□ -0.93
APOC1-201ENST00000586638 HHATLQ9HCP6 504 aa9.23□□□□□ -0.93
APOC1-201ENST00000586638 CCNB1IP1Q9NPC3 277 aa9.23□□□□□ -0.93
APOC1-201ENST00000586638 PLCXD1Q9NUJ7 323 aa9.23□□□□□ -0.93
APOC1-201ENST00000586638 FKBP14Q9NWM8 211 aa9.23□□□□□ -0.93
APOC1-201ENST00000586638 GPR83Q9NYM4 423 aa9.23□□□□□ -0.93
APOC1-201ENST00000586638 TAS2R16Q9NYV7 291 aa9.23□□□□□ -0.93
APOC1-201ENST00000586638 IL20Q9NYY1 176 aa9.23□□□□□ -0.93
APOC1-201ENST00000586638 YARS2Q9Y2Z4 477 aaKnown RBP9.23□□□□□ -0.93
APOC1-201ENST00000586638 TMED7Q9Y3B3 224 aa9.23□□□□□ -0.93
APOC1-201ENST00000586638 AHCTF1Q8WYP5 2266 aa9.22□□□□□ -0.93
APOC1-201ENST00000586638 ZC3H12DA2A288 527 aaKnown RBP9.22□□□□□ -0.93
APOC1-201ENST00000586638 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9.22□□□□□ -0.93
APOC1-201ENST00000586638 MCIDASD6RGH6 385 aa9.22□□□□□ -0.93
APOC1-201ENST00000586638 G3V3Y1 287 aa9.22□□□□□ -0.93
APOC1-201ENST00000586638 BHLHE40O14503 412 aa9.22□□□□□ -0.93
APOC1-201ENST00000586638 TP53I11O14683 189 aa9.22□□□□□ -0.93
APOC1-201ENST00000586638 SURF4O15260 269 aa9.22□□□□□ -0.93
APOC1-201ENST00000586638 TLX2O43763 284 aaPredicted RBP9.22□□□□□ -0.93
APOC1-201ENST00000586638 SUSD5O60279 629 aa9.22□□□□□ -0.93
APOC1-201ENST00000586638 PTP4A3O75365 173 aa9.22□□□□□ -0.93
APOC1-201ENST00000586638 RCBTB2O95199 551 aa9.22□□□□□ -0.93
APOC1-201ENST00000586638 BGLAPP02818 100 aa9.22□□□□□ -0.93
APOC1-201ENST00000586638 CDK1P06493 297 aa9.22□□□□□ -0.93
APOC1-201ENST00000586638 STSP08842 583 aa9.22□□□□□ -0.93
APOC1-201ENST00000586638 DBTP11182 482 aaKnown RBP9.22□□□□□ -0.93
APOC1-201ENST00000586638 PRKCAP17252 672 aa9.22□□□□□ -0.93
APOC1-201ENST00000586638 PCMT1P22061 227 aa9.22□□□□□ -0.93
APOC1-201ENST00000586638 CXCR1P25024 350 aa9.22□□□□□ -0.93
APOC1-201ENST00000586638 SLC6A6P31641 620 aa9.22□□□□□ -0.93
APOC1-201ENST00000586638 CASP3P42574 277 aa9.22□□□□□ -0.93
APOC1-201ENST00000586638 EGR4Q05215 589 aa9.22□□□□□ -0.93
APOC1-201ENST00000586638 C17orf67Q0P5P2 114 aa9.22□□□□□ -0.93
APOC1-201ENST00000586638 ZNF74Q16587 644 aa9.22□□□□□ -0.93
APOC1-201ENST00000586638 OCLNQ16625 522 aa9.22□□□□□ -0.93
APOC1-201ENST00000586638 ZBED5Q49AG3 693 aa9.22□□□□□ -0.93
APOC1-201ENST00000586638 SYT14P1Q58G82 188 aa9.22□□□□□ -0.93
APOC1-201ENST00000586638 SLC35F1Q5T1Q4 408 aa9.22□□□□□ -0.93
APOC1-201ENST00000586638 ATP1A1-AS1Q5TC04 95 aa9.22□□□□□ -0.93
APOC1-201ENST00000586638 ZNF468Q5VIY5 522 aaPredicted RBP9.22□□□□□ -0.93
APOC1-201ENST00000586638 XAF1Q6GPH4 301 aa9.22□□□□□ -0.93
APOC1-201ENST00000586638 RPL13AP3Q6NVV1 102 aa9.22□□□□□ -0.93
APOC1-201ENST00000586638 ARSKQ6UWY0 536 aa9.22□□□□□ -0.93
APOC1-201ENST00000586638 GPR141Q7Z602 305 aa9.22□□□□□ -0.93
APOC1-201ENST00000586638 TMEM156Q8N614 296 aa9.22□□□□□ -0.93
APOC1-201ENST00000586638 BBS1Q8NFJ9 593 aa9.22□□□□□ -0.93
APOC1-201ENST00000586638 OR2M3Q8NG83 312 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms