RNA–Protein interactions for RNA: ENST00000586417.5

ATG4D-204, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 2

Gene ATG4D, Length 1,752 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-204ENST00000586417 DCAF10Q5QP82 559 aa18.56■□□□□ 0.56
ATG4D-204ENST00000586417 SLC43A2Q8N370 569 aa18.56■□□□□ 0.56
ATG4D-204ENST00000586417 SLC15A4Q8N697 577 aa18.56■□□□□ 0.56
ATG4D-204ENST00000586417 FCGR1BQ92637 280 aa18.56■□□□□ 0.56
ATG4D-204ENST00000586417 C12orf43Q96C57 262 aaKnown RBP18.56■□□□□ 0.56
ATG4D-204ENST00000586417 GALNT9Q9HCQ5 603 aa18.56■□□□□ 0.56
ATG4D-204ENST00000586417 MRPS18AQ9NVS2 196 aaKnown RBP18.56■□□□□ 0.56
ATG4D-204ENST00000586417 PTTG2Q9NZH5 202 aa18.56■□□□□ 0.56
ATG4D-204ENST00000586417 OSGIN1Q9UJX0 560 aa18.56■□□□□ 0.56
ATG4D-204ENST00000586417 COMMD3-BMI1R4GMX3 469 aa18.56■□□□□ 0.56
ATG4D-204ENST00000586417 MPDZO75970 2070 aa18.56■□□□□ 0.56
ATG4D-204ENST00000586417 H3BMQ9 156 aa18.55■□□□□ 0.56
ATG4D-204ENST00000586417 PTHP01270 115 aa18.55■□□□□ 0.56
ATG4D-204ENST00000586417 ADORA3P0DMS8 318 aa18.55■□□□□ 0.56
ATG4D-204ENST00000586417 PCSK6P29122 969 aa18.55■□□□□ 0.56
ATG4D-204ENST00000586417 EIF2S3P41091 472 aaKnown RBP18.55■□□□□ 0.56
ATG4D-204ENST00000586417 PTGDSP41222 190 aa18.55■□□□□ 0.56
ATG4D-204ENST00000586417 RPS4XP62701 263 aaKnown RBP18.55■□□□□ 0.56
ATG4D-204ENST00000586417 QPRTQ15274 297 aa18.55■□□□□ 0.56
ATG4D-204ENST00000586417 COL28A1Q2UY09 1125 aa18.55■□□□□ 0.56
ATG4D-204ENST00000586417 BICRALQ6AI39 1079 aa18.55■□□□□ 0.56
ATG4D-204ENST00000586417 B3GNT6Q6ZMB0 384 aa18.55■□□□□ 0.56
ATG4D-204ENST00000586417 RTL4Q6ZR62 310 aa18.55■□□□□ 0.56
ATG4D-204ENST00000586417 SPACA3Q8IXA5 215 aa18.55■□□□□ 0.56
ATG4D-204ENST00000586417 OR10G3Q8NGC4 313 aa18.55■□□□□ 0.56
ATG4D-204ENST00000586417 LIPHQ8WWY8 451 aa18.55■□□□□ 0.56
ATG4D-204ENST00000586417 SPACA9Q96E40 222 aaPredicted RBP18.55■□□□□ 0.56
ATG4D-204ENST00000586417 PLEKHA8Q96JA3 519 aa18.55■□□□□ 0.56
ATG4D-204ENST00000586417 COG8Q96MW5 612 aa18.55■□□□□ 0.56
ATG4D-204ENST00000586417 DCBLD2Q96PD2 775 aa18.55■□□□□ 0.56
ATG4D-204ENST00000586417 IFT27Q9BW83 186 aa18.55■□□□□ 0.56
ATG4D-204ENST00000586417 FUNDC2Q9BWH2 189 aa18.55■□□□□ 0.56
ATG4D-204ENST00000586417 HINT3Q9NQE9 182 aaKnown RBP18.55■□□□□ 0.56
ATG4D-204ENST00000586417 SSUH2Q9Y2M2 353 aa18.55■□□□□ 0.56
ATG4D-204ENST00000586417 HRH3Q9Y5N1 445 aa18.55■□□□□ 0.56
ATG4D-204ENST00000586417 C2orf72A6NCS6 295 aa18.55■□□□□ 0.56
ATG4D-204ENST00000586417 NUDT14O95848 222 aa18.55■□□□□ 0.56
ATG4D-204ENST00000586417 GP1BBP13224 206 aa18.55■□□□□ 0.56
ATG4D-204ENST00000586417 PSMB9P28065 219 aa18.55■□□□□ 0.56
ATG4D-204ENST00000586417 TMBIM6P55061 237 aa18.55■□□□□ 0.56
ATG4D-204ENST00000586417 FOXK2Q01167 660 aa18.55■□□□□ 0.56
ATG4D-204ENST00000586417 C17orf67Q0P5P2 114 aa18.55■□□□□ 0.56
ATG4D-204ENST00000586417 ZNF74Q16587 644 aa18.55■□□□□ 0.56
ATG4D-204ENST00000586417 ZNF791Q3KP31 576 aaPredicted RBP18.55■□□□□ 0.56
ATG4D-204ENST00000586417 FCRLBQ6BAA4 426 aa18.55■□□□□ 0.56
ATG4D-204ENST00000586417 C9orf43Q8TAL5 461 aaPredicted RBP18.55■□□□□ 0.56
ATG4D-204ENST00000586417 IP6K3Q96PC2 410 aa18.55■□□□□ 0.56
ATG4D-204ENST00000586417 CMC2Q9NRP2 79 aa18.55■□□□□ 0.56
ATG4D-204ENST00000586417 DSPP15924 2871 aaKnown RBP18.54■□□□□ 0.56
ATG4D-204ENST00000586417 TRIM64BA6NI03 449 aa18.54■□□□□ 0.56
ATG4D-204ENST00000586417 ITGA10O75578 1167 aa18.54■□□□□ 0.56
ATG4D-204ENST00000586417 PPP1R3DO95685 299 aa18.54■□□□□ 0.56
ATG4D-204ENST00000586417 SLC6A6P31641 620 aa18.54■□□□□ 0.56
ATG4D-204ENST00000586417 SOX3P41225 446 aa18.54■□□□□ 0.56
ATG4D-204ENST00000586417 ST13P50502 369 aaKnown RBP18.54■□□□□ 0.56
ATG4D-204ENST00000586417 CHAF1BQ13112 559 aa18.54■□□□□ 0.56
ATG4D-204ENST00000586417 ZNF362Q5T0B9 420 aaPredicted RBP18.54■□□□□ 0.56
ATG4D-204ENST00000586417 SLC16A12Q6ZSM3 486 aa18.54■□□□□ 0.56
ATG4D-204ENST00000586417 ALDH16A1Q8IZ83 802 aa18.54■□□□□ 0.56
ATG4D-204ENST00000586417 BBS1Q8NFJ9 593 aa18.54■□□□□ 0.56
ATG4D-204ENST00000586417 YIPF6Q96EC8 236 aa18.54■□□□□ 0.56
ATG4D-204ENST00000586417 TMEM80Q96HE8 168 aa18.54■□□□□ 0.56
ATG4D-204ENST00000586417 TSC22D3Q99576 134 aa18.54■□□□□ 0.56
ATG4D-204ENST00000586417 FN3KQ9H479 309 aa18.54■□□□□ 0.56
ATG4D-204ENST00000586417 TAS2R10Q9NYW0 307 aa18.54■□□□□ 0.56
ATG4D-204ENST00000586417 WARS2Q9UGM6 360 aaKnown RBP18.54■□□□□ 0.56
ATG4D-204ENST00000586417 BAIAP2Q9UQB8 552 aa18.54■□□□□ 0.56
ATG4D-204ENST00000586417 RAXQ9Y2V3 346 aa18.54■□□□□ 0.56
ATG4D-204ENST00000586417 ZNF337Q9Y3M9 751 aa18.54■□□□□ 0.56
ATG4D-204ENST00000586417 ANKUB1A6NFN9 424 aa18.53■□□□□ 0.56
ATG4D-204ENST00000586417 ZNF891A8MT65 544 aaPredicted RBP18.53■□□□□ 0.56
ATG4D-204ENST00000586417 TRMUO75648 421 aaKnown RBP18.53■□□□□ 0.56
ATG4D-204ENST00000586417 NDUFB2O95178 105 aa18.53■□□□□ 0.56
ATG4D-204ENST00000586417 SUMO3P55854 103 aaPredicted RBP18.53■□□□□ 0.56
ATG4D-204ENST00000586417 LTBQ06643 244 aa18.53■□□□□ 0.56
ATG4D-204ENST00000586417 CDC20Q12834 499 aa18.53■□□□□ 0.56
ATG4D-204ENST00000586417 TMEM44Q2T9K0 475 aa18.53■□□□□ 0.56
ATG4D-204ENST00000586417 SLC35F1Q5T1Q4 408 aa18.53■□□□□ 0.56
ATG4D-204ENST00000586417 NXNL2Q5VZ03 156 aa18.53■□□□□ 0.56
ATG4D-204ENST00000586417 OR5M10Q6IEU7 315 aa18.53■□□□□ 0.56
ATG4D-204ENST00000586417 OR52I1Q8NGK6 324 aa18.53■□□□□ 0.56
ATG4D-204ENST00000586417 LGALS12Q96DT0 336 aa18.53■□□□□ 0.56
ATG4D-204ENST00000586417 KTI12Q96EK9 354 aaPredicted RBP18.53■□□□□ 0.56
ATG4D-204ENST00000586417 MOGAT1Q96PD6 335 aa18.53■□□□□ 0.56
ATG4D-204ENST00000586417 TAPBPLQ9BX59 468 aa18.53■□□□□ 0.56
ATG4D-204ENST00000586417 ARGFXA6NJG6 315 aa18.53■□□□□ 0.56
ATG4D-204ENST00000586417 M0R082 166 aa18.53■□□□□ 0.56
ATG4D-204ENST00000586417 ATE1O95260 518 aa18.53■□□□□ 0.56
ATG4D-204ENST00000586417 SERPINA7P05543 415 aa18.53■□□□□ 0.56
ATG4D-204ENST00000586417 ICAM2P13598 275 aa18.53■□□□□ 0.56
ATG4D-204ENST00000586417 CXCR1P25024 350 aa18.53■□□□□ 0.56
ATG4D-204ENST00000586417 DOC2BQ14184 412 aa18.53■□□□□ 0.56
ATG4D-204ENST00000586417 RNLSQ5VYX0 342 aa18.53■□□□□ 0.56
ATG4D-204ENST00000586417 CXXC5Q7LFL8 322 aaKnown RBP18.53■□□□□ 0.56
ATG4D-204ENST00000586417 CPOQ8IVL8 374 aa18.53■□□□□ 0.56
ATG4D-204ENST00000586417 ARMC10Q8N2F6 343 aa18.53■□□□□ 0.56
ATG4D-204ENST00000586417 CRELD1Q96HD1 420 aa18.53■□□□□ 0.56
ATG4D-204ENST00000586417 KLRF1Q9NZS2 232 aa18.53■□□□□ 0.56
ATG4D-204ENST00000586417 ENPP5Q9UJA9 477 aa18.53■□□□□ 0.56
ATG4D-204ENST00000586417 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms