RNA–Protein interactions for RNA: ENST00000584112.1

CCDC47-206, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2

Gene CCDC47, Length 588 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-206ENST00000584112 IDH2P48735 452 aaKnown RBP9.82□□□□□ -0.84
CCDC47-206ENST00000584112 POLR2HP52434 150 aaKnown RBP9.82□□□□□ -0.84
CCDC47-206ENST00000584112 NCMAPQ5T1S8 102 aa9.82□□□□□ -0.84
CCDC47-206ENST00000584112 ADAM5Q6NVV9 412 aa9.82□□□□□ -0.84
CCDC47-206ENST00000584112 HMGN2P46Q86SG4 172 aa9.82□□□□□ -0.84
CCDC47-206ENST00000584112 P2RY8Q86VZ1 359 aa9.82□□□□□ -0.84
CCDC47-206ENST00000584112 ADGRG3Q86Y34 549 aa9.82□□□□□ -0.84
CCDC47-206ENST00000584112 ZNF440Q8IYI8 595 aa9.82□□□□□ -0.84
CCDC47-206ENST00000584112 PNPT1Q8TCS8 783 aaKnown RBP9.82□□□□□ -0.84
CCDC47-206ENST00000584112 CNOT9Q92600 299 aaKnown RBP9.82□□□□□ -0.84
CCDC47-206ENST00000584112 AKAP1Q92667 903 aaKnown RBP eCLIP9.82□□□□□ -0.84
CCDC47-206ENST00000584112 ZNF75CPQ92670 426 aaPredicted RBP9.82□□□□□ -0.84
CCDC47-206ENST00000584112 FBXW5Q969U6 566 aa9.82□□□□□ -0.84
CCDC47-206ENST00000584112 TLCD1Q96CP7 247 aa9.82□□□□□ -0.84
CCDC47-206ENST00000584112 MUCL1Q96DR8 90 aa9.82□□□□□ -0.84
CCDC47-206ENST00000584112 ITCHQ96J02 903 aa9.82□□□□□ -0.84
CCDC47-206ENST00000584112 ARL5BQ96KC2 179 aa9.82□□□□□ -0.84
CCDC47-206ENST00000584112 CACYBPQ9HB71 228 aaKnown RBP9.82□□□□□ -0.84
CCDC47-206ENST00000584112 TMBIM4Q9HC24 238 aa9.82□□□□□ -0.84
CCDC47-206ENST00000584112 THUMPD1Q9NXG2 353 aaKnown RBP9.82□□□□□ -0.84
CCDC47-206ENST00000584112 TMEM181Q9P2C4 612 aa9.82□□□□□ -0.84
CCDC47-206ENST00000584112 PRSS50Q9UI38 385 aa9.82□□□□□ -0.84
CCDC47-206ENST00000584112 TRAPPC4Q9Y296 219 aa9.82□□□□□ -0.84
CCDC47-206ENST00000584112 NOSIPQ9Y314 301 aaKnown RBP9.82□□□□□ -0.84
CCDC47-206ENST00000584112 ALPK2Q86TB3 2170 aa9.82□□□□□ -0.84
CCDC47-206ENST00000584112 TENM3Q9P273 2699 aa9.82□□□□□ -0.84
CCDC47-206ENST00000584112 HYDINQ4G0P3 5121 aa9.81□□□□□ -0.84
CCDC47-206ENST00000584112 TMED7-TICAM2A0A0A6YYA0 188 aa9.81□□□□□ -0.84
CCDC47-206ENST00000584112 TMEM247A6NEH6 219 aa9.81□□□□□ -0.84
CCDC47-206ENST00000584112 UBDO15205 165 aa9.81□□□□□ -0.84
CCDC47-206ENST00000584112 CLOCKO15516 846 aa9.81□□□□□ -0.84
CCDC47-206ENST00000584112 ZNF208O43345 1280 aa9.81□□□□□ -0.84
CCDC47-206ENST00000584112 TCF21O43680 179 aa9.81□□□□□ -0.84
CCDC47-206ENST00000584112 EIF1BO60739 113 aaKnown RBP9.81□□□□□ -0.84
CCDC47-206ENST00000584112 LYZL6O75951 148 aa9.81□□□□□ -0.84
CCDC47-206ENST00000584112 C1QCP02747 245 aa9.81□□□□□ -0.84
CCDC47-206ENST00000584112 ZCCHC18P0CG32 403 aa9.81□□□□□ -0.84
CCDC47-206ENST00000584112 GGT1P19440 569 aa9.81□□□□□ -0.84
CCDC47-206ENST00000584112 COX5AP20674 150 aa9.81□□□□□ -0.84
CCDC47-206ENST00000584112 SLC1A3P43003 542 aa9.81□□□□□ -0.84
CCDC47-206ENST00000584112 CRATP43155 626 aa9.81□□□□□ -0.84
CCDC47-206ENST00000584112 SLC16A1P53985 500 aa9.81□□□□□ -0.84
CCDC47-206ENST00000584112 CRISP3P54108 245 aa9.81□□□□□ -0.84
CCDC47-206ENST00000584112 OR2B6P58173 313 aa9.81□□□□□ -0.84
CCDC47-206ENST00000584112 DSTNP60981 165 aa9.81□□□□□ -0.84
CCDC47-206ENST00000584112 SLC35A1P78382 337 aa9.81□□□□□ -0.84
CCDC47-206ENST00000584112 PLAURQ03405 335 aa9.81□□□□□ -0.84
CCDC47-206ENST00000584112 PPA1Q15181 289 aa9.81□□□□□ -0.84
CCDC47-206ENST00000584112 STK11Q15831 433 aa9.81□□□□□ -0.84
CCDC47-206ENST00000584112 ZSWIM7Q19AV6 140 aa9.81□□□□□ -0.84
CCDC47-206ENST00000584112 SLC9B1Q4ZJI4 515 aa9.81□□□□□ -0.84
CCDC47-206ENST00000584112 LIN52Q52LA3 116 aa9.81□□□□□ -0.84
CCDC47-206ENST00000584112 COX20Q5RI15 118 aa9.81□□□□□ -0.84
CCDC47-206ENST00000584112 TIMM23BQ5SRD1 257 aa9.81□□□□□ -0.84
CCDC47-206ENST00000584112 MRPL2Q5T653 305 aaKnown RBP9.81□□□□□ -0.84
CCDC47-206ENST00000584112 FBXW9Q5XUX1 488 aa9.81□□□□□ -0.84
CCDC47-206ENST00000584112 DNAJC14Q6Y2X3 702 aaPredicted RBP9.81□□□□□ -0.84
CCDC47-206ENST00000584112 APH1AQ96BI3 265 aa9.81□□□□□ -0.84
CCDC47-206ENST00000584112 ZNF775Q96BV0 537 aaPredicted RBP9.81□□□□□ -0.84
CCDC47-206ENST00000584112 NAA11Q9BSU3 229 aaPredicted RBP9.81□□□□□ -0.84
CCDC47-206ENST00000584112 OR11A1Q9GZK7 315 aa9.81□□□□□ -0.84
CCDC47-206ENST00000584112 SDR39U1Q9NRG7 319 aaPredicted RBP9.81□□□□□ -0.84
CCDC47-206ENST00000584112 TMED7Q9Y3B3 224 aa9.81□□□□□ -0.84
CCDC47-206ENST00000584112 ARFGEF3Q5TH69 2177 aa9.81□□□□□ -0.84
CCDC47-206ENST00000584112 LOC100653049A0A140TA62 436 aa9.8□□□□□ -0.84
CCDC47-206ENST00000584112 CDHR4A6H8M9 788 aa9.8□□□□□ -0.84
CCDC47-206ENST00000584112 ZNF716A6NP11 495 aa9.8□□□□□ -0.84
CCDC47-206ENST00000584112 AP3D1O14617 1153 aa9.8□□□□□ -0.84
CCDC47-206ENST00000584112 ADAM11O75078 769 aa9.8□□□□□ -0.84
CCDC47-206ENST00000584112 MRPL33O75394 65 aaKnown RBP9.8□□□□□ -0.84
CCDC47-206ENST00000584112 KRT34O76011 436 aa9.8□□□□□ -0.84
CCDC47-206ENST00000584112 CCNA2P20248 432 aa9.8□□□□□ -0.84
CCDC47-206ENST00000584112 IGHV1-2P23083 117 aa9.8□□□□□ -0.84
CCDC47-206ENST00000584112 IGFBP5P24593 272 aa9.8□□□□□ -0.84
CCDC47-206ENST00000584112 TACR3P29371 465 aa9.8□□□□□ -0.84
CCDC47-206ENST00000584112 COMPP49747 757 aaPredicted RBP9.8□□□□□ -0.84
CCDC47-206ENST00000584112 POLR2JP52435 117 aaKnown RBP9.8□□□□□ -0.84
CCDC47-206ENST00000584112 COPZ1P61923 177 aa9.8□□□□□ -0.84
CCDC47-206ENST00000584112 RPS4XP62701 263 aaKnown RBP9.8□□□□□ -0.84
CCDC47-206ENST00000584112 BSPH1Q075Z2 132 aa9.8□□□□□ -0.84
CCDC47-206ENST00000584112 EPS8Q12929 822 aa9.8□□□□□ -0.84
CCDC47-206ENST00000584112 LARS2Q15031 903 aaKnown RBP9.8□□□□□ -0.84
CCDC47-206ENST00000584112 C6orf10Q5SRN2 563 aa9.8□□□□□ -0.84
CCDC47-206ENST00000584112 BEND6Q5SZJ8 279 aaPredicted RBP9.8□□□□□ -0.84
CCDC47-206ENST00000584112 UBE2J2Q8N2K1 259 aa9.8□□□□□ -0.84
CCDC47-206ENST00000584112 MIER2Q8N344 545 aa9.8□□□□□ -0.84
CCDC47-206ENST00000584112 ZNF433Q8N7K0 673 aaPredicted RBP9.8□□□□□ -0.84
CCDC47-206ENST00000584112 TRMT61AQ96FX7 289 aaKnown RBP9.8□□□□□ -0.84
CCDC47-206ENST00000584112 RAD21L1Q9H4I0 556 aa9.8□□□□□ -0.84
CCDC47-206ENST00000584112 ARMC7Q9H6L4 198 aa9.8□□□□□ -0.84
CCDC47-206ENST00000584112 TPT1P8Q9HAU6 139 aa9.8□□□□□ -0.84
CCDC47-206ENST00000584112 PARPBPQ9NWS1 579 aa9.8□□□□□ -0.84
CCDC47-206ENST00000584112 ASB6Q9NWX5 421 aa9.8□□□□□ -0.84
CCDC47-206ENST00000584112 OSGIN1Q9UJX0 560 aa9.8□□□□□ -0.84
CCDC47-206ENST00000584112 ZNF232Q9UNY5 417 aa9.8□□□□□ -0.84
CCDC47-206ENST00000584112 LAMP3Q9UQV4 416 aa9.8□□□□□ -0.84
CCDC47-206ENST00000584112 SLC9A8Q9Y2E8 581 aa9.8□□□□□ -0.84
CCDC47-206ENST00000584112 DSPPQ9NZW4 1301 aa9.8□□□□□ -0.84
CCDC47-206ENST00000584112 A0A1W2PP18 115 aa9.79□□□□□ -0.84
CCDC47-206ENST00000584112 CIB4A0PJX0 185 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms