RNA–Protein interactions for RNA: ENST00000583972.1

SUPT6H-209, Transcript of SPT6 homolog, histone chaperone, humanhuman

TSL 2

Gene SUPT6H, Length 1,969 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT6H-209ENST00000583972 ZNF426Q9BUY5 554 aa11.29□□□□□ -0.6
SUPT6H-209ENST00000583972 RANGRFQ9HD47 186 aaPredicted RBP11.29□□□□□ -0.6
SUPT6H-209ENST00000583972 HAO2Q9NYQ3 351 aa11.29□□□□□ -0.6
SUPT6H-209ENST00000583972 CPNE7Q9UBL6 633 aa11.29□□□□□ -0.6
SUPT6H-209ENST00000583972 HS3ST3A1Q9Y663 406 aa11.29□□□□□ -0.6
SUPT6H-209ENST00000583972 SMG1Q96Q15 3661 aaKnown RBP11.29□□□□□ -0.6
SUPT6H-209ENST00000583972 TRAV27A0A087WT01 109 aa11.28□□□□□ -0.6
SUPT6H-209ENST00000583972 LY6G6EA0A0G2JKS1 128 aa11.28□□□□□ -0.6
SUPT6H-209ENST00000583972 SPTY2D1-AS1A0A0U1RR47 76 aa11.28□□□□□ -0.6
SUPT6H-209ENST00000583972 FAM240BA0A1B0GVZ2 78 aa11.28□□□□□ -0.6
SUPT6H-209ENST00000583972 CBX7O95931 251 aa11.28□□□□□ -0.6
SUPT6H-209ENST00000583972 YES1P07947 543 aa11.28□□□□□ -0.6
SUPT6H-209ENST00000583972 SLC35E2P0CK97 266 aa11.28□□□□□ -0.6
SUPT6H-209ENST00000583972 MYF5P13349 255 aa11.28□□□□□ -0.6
SUPT6H-209ENST00000583972 NME1P15531 152 aaKnown RBP11.28□□□□□ -0.6
SUPT6H-209ENST00000583972 HK1P19367 917 aa11.28□□□□□ -0.6
SUPT6H-209ENST00000583972 ELK1P19419 428 aa11.28□□□□□ -0.6
SUPT6H-209ENST00000583972 ALAS2P22557 587 aa11.28□□□□□ -0.6
SUPT6H-209ENST00000583972 RBM34P42696 430 aaKnown RBP11.28□□□□□ -0.6
SUPT6H-209ENST00000583972 RABIFP47224 123 aa11.28□□□□□ -0.6
SUPT6H-209ENST00000583972 INPP1P49441 399 aa11.28□□□□□ -0.6
SUPT6H-209ENST00000583972 CLDN20P56880 219 aa11.28□□□□□ -0.6
SUPT6H-209ENST00000583972 INSM1Q01101 510 aaPredicted RBP11.28□□□□□ -0.6
SUPT6H-209ENST00000583972 TATDN3Q17R31 274 aa11.28□□□□□ -0.6
SUPT6H-209ENST00000583972 RTL4Q6ZR62 310 aa11.28□□□□□ -0.6
SUPT6H-209ENST00000583972 NOXA1Q86UR1 476 aa11.28□□□□□ -0.6
SUPT6H-209ENST00000583972 TPRA1Q86W33 373 aa11.28□□□□□ -0.6
SUPT6H-209ENST00000583972 PARGQ86W56 976 aa11.28□□□□□ -0.6
SUPT6H-209ENST00000583972 ASCC1Q8N9N2 400 aaKnown RBP11.28□□□□□ -0.6
SUPT6H-209ENST00000583972 FAM174AQ8TBP5 190 aa11.28□□□□□ -0.6
SUPT6H-209ENST00000583972 GPBAR1Q8TDU6 330 aa11.28□□□□□ -0.6
SUPT6H-209ENST00000583972 NXPE2Q96DL1 559 aa11.28□□□□□ -0.6
SUPT6H-209ENST00000583972 RNF170Q96K19 258 aa11.28□□□□□ -0.6
SUPT6H-209ENST00000583972 OR51V1Q9H2C8 321 aa11.28□□□□□ -0.6
SUPT6H-209ENST00000583972 ADGRL4Q9HBW9 690 aa11.28□□□□□ -0.6
SUPT6H-209ENST00000583972 HRASLS2Q9NWW9 162 aa11.28□□□□□ -0.6
SUPT6H-209ENST00000583972 EXTL2Q9UBQ6 330 aa11.28□□□□□ -0.6
SUPT6H-209ENST00000583972 KLHL21Q9UJP4 597 aa11.28□□□□□ -0.6
SUPT6H-209ENST00000583972 U3KQA8 63 aa11.28□□□□□ -0.6
SUPT6H-209ENST00000583972 COL27A1Q8IZC6 1860 aaPredicted RBP11.28□□□□□ -0.6
SUPT6H-209ENST00000583972 A0A1B0GWA3 101 aa11.28□□□□□ -0.6
SUPT6H-209ENST00000583972 TNFP01375 233 aa11.28□□□□□ -0.6
SUPT6H-209ENST00000583972 SLC16A1P53985 500 aa11.28□□□□□ -0.6
SUPT6H-209ENST00000583972 UBE2IP63279 158 aaKnown RBP11.28□□□□□ -0.6
SUPT6H-209ENST00000583972 ACTC1P68032 377 aa11.28□□□□□ -0.6
SUPT6H-209ENST00000583972 ACTA1P68133 377 aa11.28□□□□□ -0.6
SUPT6H-209ENST00000583972 POU4F2Q12837 409 aa11.28□□□□□ -0.6
SUPT6H-209ENST00000583972 COL28A1Q2UY09 1125 aa11.28□□□□□ -0.6
SUPT6H-209ENST00000583972 ARL9Q6T311 187 aa11.28□□□□□ -0.6
SUPT6H-209ENST00000583972 VASH1Q7L8A9 365 aaPredicted RBP11.28□□□□□ -0.6
SUPT6H-209ENST00000583972 ZAR1Q86SH2 424 aa11.28□□□□□ -0.6
SUPT6H-209ENST00000583972 OR52R1Q8NGF1 315 aa11.28□□□□□ -0.6
SUPT6H-209ENST00000583972 OR51A7Q8NH64 312 aa11.28□□□□□ -0.6
SUPT6H-209ENST00000583972 GRHL3Q8TE85 626 aa11.28□□□□□ -0.6
SUPT6H-209ENST00000583972 PATE1Q8WXA2 126 aa11.28□□□□□ -0.6
SUPT6H-209ENST00000583972 SMPDL3BQ92485 455 aa11.28□□□□□ -0.6
SUPT6H-209ENST00000583972 CNOT9Q92600 299 aaKnown RBP11.28□□□□□ -0.6
SUPT6H-209ENST00000583972 FYTTD1Q96QD9 318 aaKnown RBP11.28□□□□□ -0.6
SUPT6H-209ENST00000583972 TTYH2Q9BSA4 534 aa11.28□□□□□ -0.6
SUPT6H-209ENST00000583972 LMF2Q9BU23 707 aaKnown RBP11.28□□□□□ -0.6
SUPT6H-209ENST00000583972 TRIM2Q9C040 744 aa11.28□□□□□ -0.6
SUPT6H-209ENST00000583972 CYSLTR2Q9NS75 346 aa11.28□□□□□ -0.6
SUPT6H-209ENST00000583972 FLRT3Q9NZU0 649 aa11.28□□□□□ -0.6
SUPT6H-209ENST00000583972 LRP4O75096 1905 aa11.28□□□□□ -0.6
SUPT6H-209ENST00000583972 URB1O60287 2271 aaKnown RBP11.27□□□□□ -0.6
SUPT6H-209ENST00000583972 OR5K4A6NMS3 321 aa11.27□□□□□ -0.61
SUPT6H-209ENST00000583972 E9PI62 339 aa11.27□□□□□ -0.61
SUPT6H-209ENST00000583972 SLC43A1O75387 559 aa11.27□□□□□ -0.61
SUPT6H-209ENST00000583972 SC5DO75845 299 aa11.27□□□□□ -0.61
SUPT6H-209ENST00000583972 IFNGP01579 166 aa11.27□□□□□ -0.61
SUPT6H-209ENST00000583972 MRPL3P09001 348 aaKnown RBP11.27□□□□□ -0.61
SUPT6H-209ENST00000583972 PEPDP12955 493 aa11.27□□□□□ -0.61
SUPT6H-209ENST00000583972 SHC1P29353 583 aa11.27□□□□□ -0.61
SUPT6H-209ENST00000583972 NOS3P29474 1203 aa11.27□□□□□ -0.61
SUPT6H-209ENST00000583972 RBMS1P29558 406 aaKnown RBP11.27□□□□□ -0.61
SUPT6H-209ENST00000583972 SLC6A6P31641 620 aa11.27□□□□□ -0.61
SUPT6H-209ENST00000583972 TALDO1P37837 337 aa11.27□□□□□ -0.61
SUPT6H-209ENST00000583972 ACAA2P42765 397 aaKnown RBP11.27□□□□□ -0.61
SUPT6H-209ENST00000583972 VSX2P58304 361 aaPredicted RBP11.27□□□□□ -0.61
SUPT6H-209ENST00000583972 HNRNPKP61978 463 aaKnown RBP eCLIP11.27□□□□□ -0.61
SUPT6H-209ENST00000583972 PSG6Q00889 435 aa11.27□□□□□ -0.61
SUPT6H-209ENST00000583972 ZNF85Q03923 595 aa11.27□□□□□ -0.61
SUPT6H-209ENST00000583972 CRMP1Q14194 572 aa11.27□□□□□ -0.61
SUPT6H-209ENST00000583972 ZNHIT3Q15649 155 aaPredicted RBP11.27□□□□□ -0.61
SUPT6H-209ENST00000583972 TIGD3Q6B0B8 471 aa11.27□□□□□ -0.61
SUPT6H-209ENST00000583972 ARHGAP11AQ6P4F7 1023 aa11.27□□□□□ -0.61
SUPT6H-209ENST00000583972 UTS2BQ765I0 119 aa11.27□□□□□ -0.61
SUPT6H-209ENST00000583972 PXKQ7Z7A4 578 aa11.27□□□□□ -0.61
SUPT6H-209ENST00000583972 OAFQ86UD1 273 aa11.27□□□□□ -0.61
SUPT6H-209ENST00000583972 LSRQ86X29 649 aaPredicted RBP11.27□□□□□ -0.61
SUPT6H-209ENST00000583972 TCTE3Q8IZS6 198 aa11.27□□□□□ -0.61
SUPT6H-209ENST00000583972 LSMEM1Q8N8F7 131 aa11.27□□□□□ -0.61
SUPT6H-209ENST00000583972 ABHD4Q8TB40 342 aa11.27□□□□□ -0.61
SUPT6H-209ENST00000583972 C4orf36Q96KX1 117 aa11.27□□□□□ -0.61
SUPT6H-209ENST00000583972 LRFN5Q96NI6 719 aa11.27□□□□□ -0.61
SUPT6H-209ENST00000583972 CCDC3Q9BQI4 270 aa11.27□□□□□ -0.61
SUPT6H-209ENST00000583972 MARVELD1Q9BSK0 173 aa11.27□□□□□ -0.61
SUPT6H-209ENST00000583972 GSDMCQ9BYG8 508 aa11.27□□□□□ -0.61
SUPT6H-209ENST00000583972 PPIL3Q9H2H8 161 aaKnown RBP11.27□□□□□ -0.61
SUPT6H-209ENST00000583972 MCCC2Q9HCC0 563 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms