RNA–Protein interactions for RNA: ENST00000582448.5

SS18-221, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 585 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-221ENST00000582448 C19orf25Q9UFG5 118 aaPredicted RBP9.32□□□□□ -0.92
SS18-221ENST00000582448 COA3Q9Y2R0 106 aaPredicted RBP9.32□□□□□ -0.92
SS18-221ENST00000582448 MAGED1Q9Y5V3 778 aaPredicted RBP9.32□□□□□ -0.92
SS18-221ENST00000582448 ADGRG4Q8IZF6 3080 aa9.32□□□□□ -0.92
SS18-221ENST00000582448 MED13LQ71F56 2210 aa9.31□□□□□ -0.92
SS18-221ENST00000582448 PDZD2O15018 2839 aa9.31□□□□□ -0.92
SS18-221ENST00000582448 IGKV3D-11A0A0A0MRZ8 115 aa9.31□□□□□ -0.92
SS18-221ENST00000582448 LOC100130705A0A1B0GUX0 176 aa9.31□□□□□ -0.92
SS18-221ENST00000582448 TCRBV16S1A1N1A0A5B0 115 aa9.31□□□□□ -0.92
SS18-221ENST00000582448 OR6C76A6NM76 312 aa9.31□□□□□ -0.92
SS18-221ENST00000582448 A8MUA0 341 aa9.31□□□□□ -0.92
SS18-221ENST00000582448 IDSB3KWA1 339 aa9.31□□□□□ -0.92
SS18-221ENST00000582448 M0R3H8 397 aa9.31□□□□□ -0.92
SS18-221ENST00000582448 BCKDKO14874 412 aa9.31□□□□□ -0.92
SS18-221ENST00000582448 KIAA0513O60268 411 aa9.31□□□□□ -0.92
SS18-221ENST00000582448 FCMRO60667 390 aa9.31□□□□□ -0.92
SS18-221ENST00000582448 SEC24DO94855 1032 aaPredicted RBP9.31□□□□□ -0.92
SS18-221ENST00000582448 CYC1P08574 325 aa9.31□□□□□ -0.92
SS18-221ENST00000582448 HPGDP15428 266 aa9.31□□□□□ -0.92
SS18-221ENST00000582448 S1PR1P21453 382 aa9.31□□□□□ -0.92
SS18-221ENST00000582448 EMDP50402 254 aa9.31□□□□□ -0.92
SS18-221ENST00000582448 UGT2B15P54855 530 aa9.31□□□□□ -0.92
SS18-221ENST00000582448 ADARB1P78563 741 aaKnown RBP9.31□□□□□ -0.92
SS18-221ENST00000582448 RHAGQ02094 409 aa9.31□□□□□ -0.92
SS18-221ENST00000582448 ST3GAL3Q11203 375 aa9.31□□□□□ -0.92
SS18-221ENST00000582448 KEAP1Q14145 624 aa9.31□□□□□ -0.92
SS18-221ENST00000582448 IQCCQ4KMZ1 466 aa9.31□□□□□ -0.92
SS18-221ENST00000582448 CCNJQ5T5M9 372 aa9.31□□□□□ -0.92
SS18-221ENST00000582448 FAHD1Q6P587 224 aa9.31□□□□□ -0.92
SS18-221ENST00000582448 CD300LDQ6UXZ3 194 aa9.31□□□□□ -0.92
SS18-221ENST00000582448 DGAT2L6Q6ZPD8 337 aa9.31□□□□□ -0.92
SS18-221ENST00000582448 PLEKHM3Q6ZWE6 761 aa9.31□□□□□ -0.92
SS18-221ENST00000582448 SPATC1Q76KD6 591 aa9.31□□□□□ -0.92
SS18-221ENST00000582448 SLC29A4Q7RTT9 530 aa9.31□□□□□ -0.92
SS18-221ENST00000582448 GALNT5Q7Z7M9 940 aa9.31□□□□□ -0.92
SS18-221ENST00000582448 VRK2Q86Y07 508 aa9.31□□□□□ -0.92
SS18-221ENST00000582448 LINC00482Q8N8I6 264 aa9.31□□□□□ -0.92
SS18-221ENST00000582448 ZNF527Q8NB42 609 aa9.31□□□□□ -0.92
SS18-221ENST00000582448 MORN4Q8NDC4 146 aa9.31□□□□□ -0.92
SS18-221ENST00000582448 TOR1AIP2Q8NFQ8 470 aa9.31□□□□□ -0.92
SS18-221ENST00000582448 OIT3Q8WWZ8 545 aa9.31□□□□□ -0.92
SS18-221ENST00000582448 SLC38A4Q969I6 547 aa9.31□□□□□ -0.92
SS18-221ENST00000582448 VSTM2LQ96N03 204 aa9.31□□□□□ -0.92
SS18-221ENST00000582448 ARHGDIGQ99819 225 aa9.31□□□□□ -0.92
SS18-221ENST00000582448 PSD2Q9BQI7 771 aa9.31□□□□□ -0.92
SS18-221ENST00000582448 OR8D2Q9GZM6 311 aa9.31□□□□□ -0.92
SS18-221ENST00000582448 QRSL1Q9H0R6 528 aaKnown RBP9.31□□□□□ -0.92
SS18-221ENST00000582448 ANKRD19PQ9H560 264 aa9.31□□□□□ -0.92
SS18-221ENST00000582448 ZNF696Q9H7X3 374 aa9.31□□□□□ -0.92
SS18-221ENST00000582448 KLHL1Q9NR64 748 aa9.31□□□□□ -0.92
SS18-221ENST00000582448 ACER3Q9NUN7 267 aa9.31□□□□□ -0.92
SS18-221ENST00000582448 UBAP1Q9NZ09 502 aa9.31□□□□□ -0.92
SS18-221ENST00000582448 BLOC1S6Q9UL45 172 aa9.31□□□□□ -0.92
SS18-221ENST00000582448 MGAT4BQ9UQ53 548 aa9.31□□□□□ -0.92
SS18-221ENST00000582448 GMPPBQ9Y5P6 360 aa9.31□□□□□ -0.92
SS18-221ENST00000582448 SNRNP200O75643 2136 aaKnown RBP9.31□□□□□ -0.92
SS18-221ENST00000582448 IGHV1-45A0A0A0MS14 117 aa9.3□□□□□ -0.92
SS18-221ENST00000582448 A0A1W2PRQ8 180 aa9.3□□□□□ -0.92
SS18-221ENST00000582448 OR5H15A6NDH6 313 aa9.3□□□□□ -0.92
SS18-221ENST00000582448 NPIPA5E9PKD4 350 aa9.3□□□□□ -0.92
SS18-221ENST00000582448 J3KTA2 159 aa9.3□□□□□ -0.92
SS18-221ENST00000582448 DLGAP1O14490 977 aa9.3□□□□□ -0.92
SS18-221ENST00000582448 SLC16A6O15403 523 aa9.3□□□□□ -0.92
SS18-221ENST00000582448 OR10H3O60404 316 aa9.3□□□□□ -0.92
SS18-221ENST00000582448 NME6O75414 186 aaPredicted RBP9.3□□□□□ -0.92
SS18-221ENST00000582448 KCNK2O95069 426 aa9.3□□□□□ -0.92
SS18-221ENST00000582448 ADAP00813 363 aa9.3□□□□□ -0.92
SS18-221ENST00000582448 PIGAP37287 484 aa9.3□□□□□ -0.92
SS18-221ENST00000582448 MAP3K8P41279 467 aa9.3□□□□□ -0.92
SS18-221ENST00000582448 PPICP45877 212 aa9.3□□□□□ -0.92
SS18-221ENST00000582448 DAPP51397 102 aa9.3□□□□□ -0.92
SS18-221ENST00000582448 TOP3AQ13472 1001 aaPredicted RBP9.3□□□□□ -0.92
SS18-221ENST00000582448 DGCR6Q14129 220 aa9.3□□□□□ -0.92
SS18-221ENST00000582448 TRAM2Q15035 370 aa9.3□□□□□ -0.92
SS18-221ENST00000582448 CR1LQ2VPA4 569 aa9.3□□□□□ -0.92
SS18-221ENST00000582448 ZNF766Q5HY98 468 aa9.3□□□□□ -0.92
SS18-221ENST00000582448 RNF220Q5VTB9 566 aa9.3□□□□□ -0.92
SS18-221ENST00000582448 FCRLBQ6BAA4 426 aa9.3□□□□□ -0.92
SS18-221ENST00000582448 SPNS3Q6ZMD2 512 aa9.3□□□□□ -0.92
SS18-221ENST00000582448 C3P1Q6ZMU1 363 aa9.3□□□□□ -0.92
SS18-221ENST00000582448 MEX3BQ6ZN04 569 aaKnown RBP9.3□□□□□ -0.92
SS18-221ENST00000582448 ZNF836Q6ZNA1 936 aa9.3□□□□□ -0.92
SS18-221ENST00000582448 OLIG3Q7RTU3 272 aa9.3□□□□□ -0.92
SS18-221ENST00000582448 HMGN2P46Q86SG4 172 aa9.3□□□□□ -0.92
SS18-221ENST00000582448 SLC5A8Q8N695 610 aa9.3□□□□□ -0.92
SS18-221ENST00000582448 ZNF614Q8N883 585 aa9.3□□□□□ -0.92
SS18-221ENST00000582448 SIMC1Q8NDZ2 872 aa9.3□□□□□ -0.92
SS18-221ENST00000582448 PLPP5Q8NEB5 264 aa9.3□□□□□ -0.92
SS18-221ENST00000582448 OR4C15Q8NGM1 316 aa9.3□□□□□ -0.92
SS18-221ENST00000582448 C16orf52Q8NHV5 167 aa9.3□□□□□ -0.92
SS18-221ENST00000582448 SLC2A12Q8TD20 617 aa9.3□□□□□ -0.92
SS18-221ENST00000582448 PTPMT1Q8WUK0 201 aaPredicted RBP9.3□□□□□ -0.92
SS18-221ENST00000582448 HOXB13Q92826 284 aaPredicted RBP9.3□□□□□ -0.92
SS18-221ENST00000582448 TSLPQ969D9 159 aa9.3□□□□□ -0.92
SS18-221ENST00000582448 MUS81Q96NY9 551 aa9.3□□□□□ -0.92
SS18-221ENST00000582448 FEVQ99581 238 aa9.3□□□□□ -0.92
SS18-221ENST00000582448 MRPS26Q9BYN8 205 aaKnown RBP9.3□□□□□ -0.92
SS18-221ENST00000582448 KRTAP4-9Q9BYQ8 210 aa9.3□□□□□ -0.92
SS18-221ENST00000582448 VN1R1Q9GZP7 353 aa9.3□□□□□ -0.92
SS18-221ENST00000582448 ST6GALNAC1Q9NSC7 600 aaPredicted RBP9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms