RNA–Protein interactions for RNA: ENST00000581241.5

CSNK1D-217, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 6,094 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-217ENST00000581241 DTD2Q96FN9 168 aa13.56□□□□□ -0.24
CSNK1D-217ENST00000581241 MED20Q9H944 212 aa13.56□□□□□ -0.24
CSNK1D-217ENST00000581241 ARNT2Q9HBZ2 717 aa13.56□□□□□ -0.24
CSNK1D-217ENST00000581241 STARD5Q9NSY2 213 aa13.56□□□□□ -0.24
CSNK1D-217ENST00000581241 PCYT1BQ9Y5K3 369 aaPredicted RBP13.56□□□□□ -0.24
CSNK1D-217ENST00000581241 OR2A25A4D2G3 310 aa13.56□□□□□ -0.24
CSNK1D-217ENST00000581241 CR2P20023 1033 aa13.56□□□□□ -0.24
CSNK1D-217ENST00000581241 RPS18P62269 152 aaKnown RBP13.56□□□□□ -0.24
CSNK1D-217ENST00000581241 DBPQ10586 325 aaPredicted RBP13.56□□□□□ -0.24
CSNK1D-217ENST00000581241 NXNL2Q5VZ03 156 aa13.56□□□□□ -0.24
CSNK1D-217ENST00000581241 TANGO2Q6ICL3 276 aa13.56□□□□□ -0.24
CSNK1D-217ENST00000581241 MAVSQ7Z434 540 aa13.56□□□□□ -0.24
CSNK1D-217ENST00000581241 RNF175Q8N4F7 328 aa13.56□□□□□ -0.24
CSNK1D-217ENST00000581241 RTP3Q9BQQ7 232 aa13.56□□□□□ -0.24
CSNK1D-217ENST00000581241 C8orf33Q9H7E9 229 aaPredicted RBP13.56□□□□□ -0.24
CSNK1D-217ENST00000581241 A4GALTQ9NPC4 353 aa13.56□□□□□ -0.24
CSNK1D-217ENST00000581241 SULT2B1O00204 365 aa13.56□□□□□ -0.24
CSNK1D-217ENST00000581241 PDGFAP04085 211 aa13.56□□□□□ -0.24
CSNK1D-217ENST00000581241 IQCF3P0C7M6 154 aa13.56□□□□□ -0.24
CSNK1D-217ENST00000581241 BMP1P13497 986 aa13.56□□□□□ -0.24
CSNK1D-217ENST00000581241 CPMP14384 443 aa13.56□□□□□ -0.24
CSNK1D-217ENST00000581241 PPT1P50897 306 aa13.56□□□□□ -0.24
CSNK1D-217ENST00000581241 GPLD1P80108 840 aa13.56□□□□□ -0.24
CSNK1D-217ENST00000581241 AARDQ4LEZ3 155 aa13.56□□□□□ -0.24
CSNK1D-217ENST00000581241 TMEM184AQ6ZMB5 413 aa13.56□□□□□ -0.24
CSNK1D-217ENST00000581241 CMIPQ8IY22 773 aa13.56□□□□□ -0.24
CSNK1D-217ENST00000581241 OR4Q3Q8NH05 313 aa13.56□□□□□ -0.24
CSNK1D-217ENST00000581241 SCARB1Q8WTV0 552 aa13.56□□□□□ -0.24
CSNK1D-217ENST00000581241 PLEK2Q9NYT0 353 aa13.56□□□□□ -0.24
CSNK1D-217ENST00000581241 SDC3O75056 442 aa13.56□□□□□ -0.24
CSNK1D-217ENST00000581241 XCR1P46094 333 aa13.56□□□□□ -0.24
CSNK1D-217ENST00000581241 MSMO1Q15800 293 aa13.56□□□□□ -0.24
CSNK1D-217ENST00000581241 RBMS3Q6XE24 437 aaKnown RBP13.56□□□□□ -0.24
CSNK1D-217ENST00000581241 TMUB2Q71RG4 321 aa13.56□□□□□ -0.24
CSNK1D-217ENST00000581241 PTRH1Q86Y79 214 aaKnown RBP13.56□□□□□ -0.24
CSNK1D-217ENST00000581241 OR56B1Q8NGI3 324 aa13.56□□□□□ -0.24
CSNK1D-217ENST00000581241 TAS2R16Q9NYV7 291 aa13.56□□□□□ -0.24
CSNK1D-217ENST00000581241 VDAC3Q9Y277 283 aa13.56□□□□□ -0.24
CSNK1D-217ENST00000581241 PHLPP1O60346 1717 aa13.55□□□□□ -0.24
CSNK1D-217ENST00000581241 YY2O15391 372 aa13.55□□□□□ -0.24
CSNK1D-217ENST00000581241 SLC16A6O15403 523 aa13.55□□□□□ -0.24
CSNK1D-217ENST00000581241 SEMA4FO95754 770 aa13.55□□□□□ -0.24
CSNK1D-217ENST00000581241 DBHP09172 617 aa13.55□□□□□ -0.24
CSNK1D-217ENST00000581241 OR2T7P0C7T2 308 aa13.55□□□□□ -0.24
CSNK1D-217ENST00000581241 NME2P22392 152 aa13.55□□□□□ -0.24
CSNK1D-217ENST00000581241 HTR2CP28335 458 aa13.55□□□□□ -0.24
CSNK1D-217ENST00000581241 OTX2P32243 289 aa13.55□□□□□ -0.24
CSNK1D-217ENST00000581241 ZNF761Q86XN6 746 aaPredicted RBP13.55□□□□□ -0.24
CSNK1D-217ENST00000581241 MFSD9Q8NBP5 474 aa13.55□□□□□ -0.24
CSNK1D-217ENST00000581241 OR2T27Q8NH04 317 aa13.55□□□□□ -0.24
CSNK1D-217ENST00000581241 CPNE4Q96A23 557 aaPredicted RBP13.55□□□□□ -0.24
CSNK1D-217ENST00000581241 FOXN4Q96NZ1 517 aa13.55□□□□□ -0.24
CSNK1D-217ENST00000581241 CMSS1Q9BQ75 279 aaKnown RBP13.55□□□□□ -0.24
CSNK1D-217ENST00000581241 CAMK2AQ9UQM7 478 aa13.55□□□□□ -0.24
CSNK1D-217ENST00000581241 SLC9B1P1A6NJY1 282 aa13.55□□□□□ -0.24
CSNK1D-217ENST00000581241 ATP6V1G2-DDX39BF2Z307 99 aa13.55□□□□□ -0.24
CSNK1D-217ENST00000581241 ACOT8O14734 319 aa13.55□□□□□ -0.24
CSNK1D-217ENST00000581241 IGHG1P01857 330 aa13.55□□□□□ -0.24
CSNK1D-217ENST00000581241 ATXN1LP0C7T5 689 aaKnown RBP13.55□□□□□ -0.24
CSNK1D-217ENST00000581241 HNRNPA2B1P22626 353 aaKnown RBP13.55□□□□□ -0.24
CSNK1D-217ENST00000581241 HTR1FP30939 366 aa13.55□□□□□ -0.24
CSNK1D-217ENST00000581241 S100A11P31949 105 aa13.55□□□□□ -0.24
CSNK1D-217ENST00000581241 GIPRP48546 466 aa13.55□□□□□ -0.24
CSNK1D-217ENST00000581241 ZNF74Q16587 644 aa13.55□□□□□ -0.24
CSNK1D-217ENST00000581241 SLC51BQ86UW2 128 aa13.55□□□□□ -0.24
CSNK1D-217ENST00000581241 SLC30A7Q8NEW0 376 aa13.55□□□□□ -0.24
CSNK1D-217ENST00000581241 CRYGNQ8WXF5 182 aa13.55□□□□□ -0.24
CSNK1D-217ENST00000581241 STEAP1Q9UHE8 339 aa13.55□□□□□ -0.24
CSNK1D-217ENST00000581241 SMIM18P0DKX4 95 aa13.55□□□□□ -0.24
CSNK1D-217ENST00000581241 RPS15P62841 145 aaKnown RBP13.55□□□□□ -0.24
CSNK1D-217ENST00000581241 SYT6Q5T7P8 510 aaPredicted RBP13.55□□□□□ -0.24
CSNK1D-217ENST00000581241 RETREG3Q86VR2 466 aa13.55□□□□□ -0.24
CSNK1D-217ENST00000581241 PELI3Q8N2H9 469 aa13.55□□□□□ -0.24
CSNK1D-217ENST00000581241 SGK3Q96BR1 496 aa13.55□□□□□ -0.24
CSNK1D-217ENST00000581241 UHRF2Q96PU4 802 aa13.55□□□□□ -0.24
CSNK1D-217ENST00000581241 GABRQQ9UN88 632 aa13.55□□□□□ -0.24
CSNK1D-217ENST00000581241 MYH11P35749 1972 aa13.55□□□□□ -0.24
CSNK1D-217ENST00000581241 C2orf72A6NCS6 295 aa13.55□□□□□ -0.24
CSNK1D-217ENST00000581241 ADAM10O14672 748 aa13.55□□□□□ -0.24
CSNK1D-217ENST00000581241 ZNF26P17031 533 aaPredicted RBP13.55□□□□□ -0.24
CSNK1D-217ENST00000581241 ZNF28P17035 718 aa13.55□□□□□ -0.24
CSNK1D-217ENST00000581241 ELK1P19419 428 aa13.55□□□□□ -0.24
CSNK1D-217ENST00000581241 SHC1P29353 583 aa13.55□□□□□ -0.24
CSNK1D-217ENST00000581241 GCH1P30793 250 aa13.55□□□□□ -0.24
CSNK1D-217ENST00000581241 ILKQ13418 452 aa13.55□□□□□ -0.24
CSNK1D-217ENST00000581241 CCNJQ5T5M9 372 aa13.55□□□□□ -0.24
CSNK1D-217ENST00000581241 FAM57BQ71RH2 274 aa13.55□□□□□ -0.24
CSNK1D-217ENST00000581241 TTC9BQ8N6N2 239 aa13.55□□□□□ -0.24
CSNK1D-217ENST00000581241 ANKRD9Q96BM1 317 aaPredicted RBP13.55□□□□□ -0.24
CSNK1D-217ENST00000581241 DAZAP1Q96EP5 407 aaKnown RBP13.55□□□□□ -0.24
CSNK1D-217ENST00000581241 ZNF578Q96N58 590 aaPredicted RBP13.55□□□□□ -0.24
CSNK1D-217ENST00000581241 C4AP0C0L4 1744 aa13.55□□□□□ -0.24
CSNK1D-217ENST00000581241 C4BP0C0L5 1744 aa13.55□□□□□ -0.24
CSNK1D-217ENST00000581241 FAM227AF5H4B4 570 aa13.55□□□□□ -0.24
CSNK1D-217ENST00000581241 IMPA1P29218 277 aa13.55□□□□□ -0.24
CSNK1D-217ENST00000581241 NUDT1P36639 197 aa13.55□□□□□ -0.24
CSNK1D-217ENST00000581241 P2RY2P41231 377 aa13.55□□□□□ -0.24
CSNK1D-217ENST00000581241 SIRPAP78324 504 aa13.55□□□□□ -0.24
CSNK1D-217ENST00000581241 SLC5A12Q1EHB4 618 aa13.55□□□□□ -0.24
CSNK1D-217ENST00000581241 C11orf91Q3C1V1 193 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms