RNA–Protein interactions for RNA: ENST00000578917.1

TRAF4-213, Transcript of TNF receptor associated factor 4, humanhuman

TSL 4

Gene TRAF4, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-213ENST00000578917 ULK3Q6PHR2 472 aa5.83□□□□□ -1.48
TRAF4-213ENST00000578917 DHRS4L2Q6PKH6 230 aa5.83□□□□□ -1.48
TRAF4-213ENST00000578917 CXorf67Q86X51 503 aaPredicted RBP5.83□□□□□ -1.48
TRAF4-213ENST00000578917 CDC20BQ86Y33 519 aa5.83□□□□□ -1.48
TRAF4-213ENST00000578917 WFDC8Q8IUA0 241 aa5.83□□□□□ -1.48
TRAF4-213ENST00000578917 C10orf111Q8N326 155 aa5.83□□□□□ -1.48
TRAF4-213ENST00000578917 POU5F2Q8N7G0 328 aa5.83□□□□□ -1.48
TRAF4-213ENST00000578917 OR8J3Q8NGG0 315 aa5.83□□□□□ -1.48
TRAF4-213ENST00000578917 RP9Q8TA86 221 aaKnown RBP5.83□□□□□ -1.48
TRAF4-213ENST00000578917 VANGL1Q8TAA9 524 aaPredicted RBP5.83□□□□□ -1.48
TRAF4-213ENST00000578917 RASSF5Q8WWW0 418 aa5.83□□□□□ -1.48
TRAF4-213ENST00000578917 HSD17B8Q92506 261 aa5.83□□□□□ -1.48
TRAF4-213ENST00000578917 PROX1Q92786 737 aa5.83□□□□□ -1.48
TRAF4-213ENST00000578917 KISS1RQ969F8 398 aaPredicted RBP5.83□□□□□ -1.48
TRAF4-213ENST00000578917 SLC35B4Q969S0 331 aa5.83□□□□□ -1.48
TRAF4-213ENST00000578917 MUCL1Q96DR8 90 aa5.83□□□□□ -1.48
TRAF4-213ENST00000578917 PIK3IP1Q96FE7 263 aa5.83□□□□□ -1.48
TRAF4-213ENST00000578917 SLC47A1Q96FL8 570 aa5.83□□□□□ -1.48
TRAF4-213ENST00000578917 ZNF317Q96PQ6 595 aaPredicted RBP5.83□□□□□ -1.48
TRAF4-213ENST00000578917 PSD2Q9BQI7 771 aa5.83□□□□□ -1.48
TRAF4-213ENST00000578917 PRR14Q9BWN1 585 aa5.83□□□□□ -1.48
TRAF4-213ENST00000578917 POTEKPQ9BYX7 375 aa5.83□□□□□ -1.48
TRAF4-213ENST00000578917 ACTR6Q9GZN1 396 aa5.83□□□□□ -1.48
TRAF4-213ENST00000578917 KAT8Q9H7Z6 458 aaKnown RBP5.83□□□□□ -1.48
TRAF4-213ENST00000578917 EFCAB1Q9HAE3 211 aa5.83□□□□□ -1.48
TRAF4-213ENST00000578917 NGBQ9NPG2 151 aa5.83□□□□□ -1.48
TRAF4-213ENST00000578917 UPB1Q9UBR1 384 aa5.83□□□□□ -1.48
TRAF4-213ENST00000578917 GPR52Q9Y2T5 361 aa5.83□□□□□ -1.48
TRAF4-213ENST00000578917 GMEB1Q9Y692 573 aa5.83□□□□□ -1.48
TRAF4-213ENST00000578917 NCKAP5O14513 1909 aa5.83□□□□□ -1.48
TRAF4-213ENST00000578917 NCOA6Q14686 2063 aaPredicted RBP5.83□□□□□ -1.48
TRAF4-213ENST00000578917 AKAP6Q13023 2319 aa5.82□□□□□ -1.48
TRAF4-213ENST00000578917 A0A1B0GWA3 101 aa5.82□□□□□ -1.48
TRAF4-213ENST00000578917 ZC3H12DA2A288 527 aaKnown RBP5.82□□□□□ -1.48
TRAF4-213ENST00000578917 LIPT2A6NK58 231 aa5.82□□□□□ -1.48
TRAF4-213ENST00000578917 DYNC1I1O14576 645 aa5.82□□□□□ -1.48
TRAF4-213ENST00000578917 OR2T1O43869 369 aa5.82□□□□□ -1.48
TRAF4-213ENST00000578917 GMNNO75496 209 aa5.82□□□□□ -1.48
TRAF4-213ENST00000578917 LYZL6O75951 148 aa5.82□□□□□ -1.48
TRAF4-213ENST00000578917 MFN2O95140 757 aa5.82□□□□□ -1.48
TRAF4-213ENST00000578917 VAMP5O95183 116 aa5.82□□□□□ -1.48
TRAF4-213ENST00000578917 IGHV3-9P01782 118 aa5.82□□□□□ -1.48
TRAF4-213ENST00000578917 OPN1SWP03999 348 aa5.82□□□□□ -1.48
TRAF4-213ENST00000578917 HIST1H2ABP04908 130 aa5.82□□□□□ -1.48
TRAF4-213ENST00000578917 C8BP07358 591 aa5.82□□□□□ -1.48
TRAF4-213ENST00000578917 COX4I1P13073 169 aa5.82□□□□□ -1.48
TRAF4-213ENST00000578917 NQO1P15559 274 aaKnown RBP5.82□□□□□ -1.48
TRAF4-213ENST00000578917 HOXB9P17482 250 aaPredicted RBP5.82□□□□□ -1.48
TRAF4-213ENST00000578917 CDH2P19022 906 aaPredicted RBP5.82□□□□□ -1.48
TRAF4-213ENST00000578917 KLK2P20151 261 aa5.82□□□□□ -1.48
TRAF4-213ENST00000578917 CD247P20963 164 aa5.82□□□□□ -1.48
TRAF4-213ENST00000578917 DNAJA1P31689 397 aaKnown RBP5.82□□□□□ -1.48
TRAF4-213ENST00000578917 OR3A2P47893 321 aa5.82□□□□□ -1.48
TRAF4-213ENST00000578917 PCYT1AP49585 367 aa5.82□□□□□ -1.48
TRAF4-213ENST00000578917 GYS2P54840 703 aa5.82□□□□□ -1.48
TRAF4-213ENST00000578917 GNGT1P63211 74 aa5.82□□□□□ -1.48
TRAF4-213ENST00000578917 PLAURQ03405 335 aa5.82□□□□□ -1.48
TRAF4-213ENST00000578917 DMTNQ08495 405 aa5.82□□□□□ -1.48
TRAF4-213ENST00000578917 FAPQ12884 760 aa5.82□□□□□ -1.48
TRAF4-213ENST00000578917 ITGADQ13349 1161 aa5.82□□□□□ -1.48
TRAF4-213ENST00000578917 PDK3Q15120 406 aa5.82□□□□□ -1.48
TRAF4-213ENST00000578917 GUSBP1Q15486 140 aa5.82□□□□□ -1.48
TRAF4-213ENST00000578917 OR1Q1Q15612 314 aa5.82□□□□□ -1.48
TRAF4-213ENST00000578917 TSC22D1Q15714 1073 aa5.82□□□□□ -1.48
TRAF4-213ENST00000578917 VMACQ2NL98 169 aa5.82□□□□□ -1.48
TRAF4-213ENST00000578917 SFRP5Q5T4F7 317 aa5.82□□□□□ -1.48
TRAF4-213ENST00000578917 FBXW9Q5XUX1 488 aa5.82□□□□□ -1.48
TRAF4-213ENST00000578917 REP15Q6BDI9 236 aa5.82□□□□□ -1.48
TRAF4-213ENST00000578917 ERICH5Q6P6B1 374 aa5.82□□□□□ -1.48
TRAF4-213ENST00000578917 PAQR6Q6TCH4 344 aa5.82□□□□□ -1.48
TRAF4-213ENST00000578917 CASP12Q6UXS9 341 aa5.82□□□□□ -1.48
TRAF4-213ENST00000578917 STAC2Q6ZMT1 411 aa5.82□□□□□ -1.48
TRAF4-213ENST00000578917 Q6ZT83 130 aa5.82□□□□□ -1.48
TRAF4-213ENST00000578917 HIST3H2AQ7L7L0 130 aa5.82□□□□□ -1.48
TRAF4-213ENST00000578917 BHLHA15Q7RTS1 189 aaPredicted RBP5.82□□□□□ -1.48
TRAF4-213ENST00000578917 AAED1Q7RTV5 226 aa5.82□□□□□ -1.48
TRAF4-213ENST00000578917 ZC3HAV1Q7Z2W4 902 aaKnown RBP5.82□□□□□ -1.48
TRAF4-213ENST00000578917 PTOV1Q86YD1 416 aa5.82□□□□□ -1.48
TRAF4-213ENST00000578917 P3H2Q8IVL5 708 aa5.82□□□□□ -1.48
TRAF4-213ENST00000578917 TMEM99Q8N816 258 aa5.82□□□□□ -1.48
TRAF4-213ENST00000578917 LSMEM1Q8N8F7 131 aa5.82□□□□□ -1.48
TRAF4-213ENST00000578917 STK35Q8TDR2 534 aa5.82□□□□□ -1.48
TRAF4-213ENST00000578917 C10orf82Q8WW14 230 aa5.82□□□□□ -1.48
TRAF4-213ENST00000578917 NRGNQ92686 78 aa5.82□□□□□ -1.48
TRAF4-213ENST00000578917 HIST1H2ACQ93077 130 aa5.82□□□□□ -1.48
TRAF4-213ENST00000578917 C3orf49Q96BT1 292 aa5.82□□□□□ -1.48
TRAF4-213ENST00000578917 S100PBPQ96BU1 408 aa5.82□□□□□ -1.48
TRAF4-213ENST00000578917 RCN3Q96D15 328 aa5.82□□□□□ -1.48
TRAF4-213ENST00000578917 CMTM5Q96DZ9 223 aa5.82□□□□□ -1.48
TRAF4-213ENST00000578917 ZNF300Q96RE9 604 aaPredicted RBP5.82□□□□□ -1.48
TRAF4-213ENST00000578917 EPYCQ99645 322 aa5.82□□□□□ -1.48
TRAF4-213ENST00000578917 MCHR1Q99705 422 aa5.82□□□□□ -1.48
TRAF4-213ENST00000578917 USB1Q9BQ65 265 aaKnown RBP5.82□□□□□ -1.48
TRAF4-213ENST00000578917 EVA1AQ9H8M9 152 aa5.82□□□□□ -1.48
TRAF4-213ENST00000578917 BCO1Q9HAY6 547 aa5.82□□□□□ -1.48
TRAF4-213ENST00000578917 ASB6Q9NWX5 421 aa5.82□□□□□ -1.48
TRAF4-213ENST00000578917 SLC9A8Q9Y2E8 581 aa5.82□□□□□ -1.48
TRAF4-213ENST00000578917 AP3M1Q9Y2T2 418 aa5.82□□□□□ -1.48
TRAF4-213ENST00000578917 SH3GLB1Q9Y371 365 aa5.82□□□□□ -1.48
TRAF4-213ENST00000578917 TESMINQ9Y4I5 508 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms