RNA–Protein interactions for RNA: ENST00000578630.1

ERBB2-208, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 2

Gene ERBB2, Length 874 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-208ENST00000578630 LIX1LQ8IVB5 337 aa10.31□□□□□ -0.76
ERBB2-208ENST00000578630 GCNT2Q8N0V5 402 aa10.31□□□□□ -0.76
ERBB2-208ENST00000578630 FAM156AQ8NDB6 213 aa10.31□□□□□ -0.76
ERBB2-208ENST00000578630 OR4D11Q8NGI4 311 aa10.31□□□□□ -0.76
ERBB2-208ENST00000578630 ADAMTS16Q8TE57 1224 aa10.31□□□□□ -0.76
ERBB2-208ENST00000578630 GEMIN6Q8WXD5 167 aaKnown RBP10.31□□□□□ -0.76
ERBB2-208ENST00000578630 POP5Q969H6 163 aaKnown RBP10.31□□□□□ -0.76
ERBB2-208ENST00000578630 MPP4Q96JB8 637 aa10.31□□□□□ -0.76
ERBB2-208ENST00000578630 NSMCE2Q96MF7 247 aa10.31□□□□□ -0.76
ERBB2-208ENST00000578630 PCDHAC1Q9H158 963 aa10.31□□□□□ -0.76
ERBB2-208ENST00000578630 DCAF13Q9NV06 445 aaKnown RBP10.31□□□□□ -0.76
ERBB2-208ENST00000578630 FOXD3Q9UJU5 478 aaPredicted RBP10.31□□□□□ -0.76
ERBB2-208ENST00000578630 FAM32AQ9Y421 112 aaKnown RBP10.31□□□□□ -0.76
ERBB2-208ENST00000578630 SNX13Q9Y5W8 968 aa10.31□□□□□ -0.76
ERBB2-208ENST00000578630 DOPEY2Q9Y3R5 2298 aa10.3□□□□□ -0.76
ERBB2-208ENST00000578630 GCN1Q92616 2671 aaKnown RBP10.3□□□□□ -0.76
ERBB2-208ENST00000578630 IGHV3-15A0A0B4J1V0 119 aa10.3□□□□□ -0.76
ERBB2-208ENST00000578630 ZC3H12DA2A288 527 aaKnown RBP10.3□□□□□ -0.76
ERBB2-208ENST00000578630 LIPT2A6NK58 231 aa10.3□□□□□ -0.76
ERBB2-208ENST00000578630 TMEM229AB2RXF0 380 aa10.3□□□□□ -0.76
ERBB2-208ENST00000578630 CHP2O43745 196 aa10.3□□□□□ -0.76
ERBB2-208ENST00000578630 CYTIPO60759 359 aa10.3□□□□□ -0.76
ERBB2-208ENST00000578630 NPIPB7O75200 414 aa10.3□□□□□ -0.76
ERBB2-208ENST00000578630 OR5F1O95221 314 aa10.3□□□□□ -0.76
ERBB2-208ENST00000578630 YES1P07947 543 aa10.3□□□□□ -0.76
ERBB2-208ENST00000578630 IMPDH2P12268 514 aa10.3□□□□□ -0.76
ERBB2-208ENST00000578630 GTF2E2P29084 291 aaKnown RBP10.3□□□□□ -0.76
ERBB2-208ENST00000578630 MSX2P35548 267 aaPredicted RBP10.3□□□□□ -0.76
ERBB2-208ENST00000578630 KIR2DL2P43627 348 aaPredicted RBP10.3□□□□□ -0.76
ERBB2-208ENST00000578630 ST3GAL3Q11203 375 aa10.3□□□□□ -0.76
ERBB2-208ENST00000578630 MFSD13AQ14CX5 517 aa10.3□□□□□ -0.76
ERBB2-208ENST00000578630 PDK3Q15120 406 aa10.3□□□□□ -0.76
ERBB2-208ENST00000578630 OR7A5Q15622 319 aa10.3□□□□□ -0.76
ERBB2-208ENST00000578630 NPTX1Q15818 432 aa10.3□□□□□ -0.76
ERBB2-208ENST00000578630 FXNQ16595 210 aa10.3□□□□□ -0.76
ERBB2-208ENST00000578630 TMEM225Q6GV28 225 aa10.3□□□□□ -0.76
ERBB2-208ENST00000578630 PAQR6Q6TCH4 344 aa10.3□□□□□ -0.76
ERBB2-208ENST00000578630 CYP4Z1Q86W10 505 aa10.3□□□□□ -0.76
ERBB2-208ENST00000578630 MFSD8Q8NHS3 518 aa10.3□□□□□ -0.76
ERBB2-208ENST00000578630 PIGXQ8TBF5 258 aa10.3□□□□□ -0.76
ERBB2-208ENST00000578630 RNF128Q8TEB7 428 aa10.3□□□□□ -0.76
ERBB2-208ENST00000578630 SLC25A36Q96CQ1 311 aa10.3□□□□□ -0.76
ERBB2-208ENST00000578630 DNAJA3Q96EY1 480 aa10.3□□□□□ -0.76
ERBB2-208ENST00000578630 SLC41A3Q96GZ6 507 aa10.3□□□□□ -0.76
ERBB2-208ENST00000578630 PYURFQ96I23 114 aa10.3□□□□□ -0.76
ERBB2-208ENST00000578630 HS6ST2Q96MM7 605 aa10.3□□□□□ -0.76
ERBB2-208ENST00000578630 BTBD10Q9BSF8 475 aa10.3□□□□□ -0.76
ERBB2-208ENST00000578630 TMEM43Q9BTV4 400 aa10.3□□□□□ -0.76
ERBB2-208ENST00000578630 THTPAQ9BU02 230 aa10.3□□□□□ -0.76
ERBB2-208ENST00000578630 MUC13Q9H3R2 512 aa10.3□□□□□ -0.76
ERBB2-208ENST00000578630 FANCFQ9NPI8 374 aa10.3□□□□□ -0.76
ERBB2-208ENST00000578630 PLEKHB1Q9UF11 243 aaPredicted RBP10.3□□□□□ -0.76
ERBB2-208ENST00000578630 RIMS3Q9UJD0 308 aa10.3□□□□□ -0.76
ERBB2-208ENST00000578630 PROCRQ9UNN8 238 aa10.3□□□□□ -0.76
ERBB2-208ENST00000578630 SPTAN1Q13813 2472 aaKnown RBP10.3□□□□□ -0.76
ERBB2-208ENST00000578630 FLNCQ14315 2725 aa10.29□□□□□ -0.76
ERBB2-208ENST00000578630 NCOA6Q14686 2063 aaPredicted RBP10.29□□□□□ -0.76
ERBB2-208ENST00000578630 ARHGAP21Q5T5U3 1957 aa10.29□□□□□ -0.76
ERBB2-208ENST00000578630 TRAV36DV7A0A075B6V5 113 aa10.29□□□□□ -0.76
ERBB2-208ENST00000578630 NKX2-6A6NCS4 301 aa10.29□□□□□ -0.76
ERBB2-208ENST00000578630 ZNF724A8MTY0 619 aa10.29□□□□□ -0.76
ERBB2-208ENST00000578630 EEF1E1-BLOC1S5C9J1V9 151 aa10.29□□□□□ -0.76
ERBB2-208ENST00000578630 GPR171O14626 319 aa10.29□□□□□ -0.76
ERBB2-208ENST00000578630 MSTNO14793 375 aa10.29□□□□□ -0.76
ERBB2-208ENST00000578630 EEF1E1O43324 174 aaKnown RBP10.29□□□□□ -0.76
ERBB2-208ENST00000578630 SS18L1O75177 396 aaPredicted RBP10.29□□□□□ -0.76
ERBB2-208ENST00000578630 TNFSF13O75888 250 aa10.29□□□□□ -0.76
ERBB2-208ENST00000578630 SMNDC1O75940 238 aaKnown RBP eCLIP10.29□□□□□ -0.76
ERBB2-208ENST00000578630 VAMP5O95183 116 aa10.29□□□□□ -0.76
ERBB2-208ENST00000578630 CLDN1O95832 211 aa10.29□□□□□ -0.76
ERBB2-208ENST00000578630 THRBP10828 461 aa10.29□□□□□ -0.76
ERBB2-208ENST00000578630 ITGA2P17301 1181 aa10.29□□□□□ -0.76
ERBB2-208ENST00000578630 TNFRSF1BP20333 461 aa10.29□□□□□ -0.76
ERBB2-208ENST00000578630 PEX19P40855 299 aa10.29□□□□□ -0.76
ERBB2-208ENST00000578630 RPS5P46782 204 aaKnown RBP10.29□□□□□ -0.76
ERBB2-208ENST00000578630 ASCL1P50553 236 aa10.29□□□□□ -0.76
ERBB2-208ENST00000578630 SIRPAP78324 504 aa10.29□□□□□ -0.76
ERBB2-208ENST00000578630 H3F3AP84243 136 aa10.29□□□□□ -0.76
ERBB2-208ENST00000578630 BNIP1Q12981 228 aa10.29□□□□□ -0.76
ERBB2-208ENST00000578630 PIN1Q13526 163 aaPredicted RBP10.29□□□□□ -0.76
ERBB2-208ENST00000578630 TRIM25Q14258 630 aaKnown RBP10.29□□□□□ -0.76
ERBB2-208ENST00000578630 CDSNQ15517 529 aa10.29□□□□□ -0.76
ERBB2-208ENST00000578630 FAM69AQ5T7M9 428 aa10.29□□□□□ -0.76
ERBB2-208ENST00000578630 LINC00114Q6XXX2 140 aa10.29□□□□□ -0.76
ERBB2-208ENST00000578630 BTLAQ7Z6A9 289 aa10.29□□□□□ -0.76
ERBB2-208ENST00000578630 VTCN1Q7Z7D3 282 aa10.29□□□□□ -0.76
ERBB2-208ENST00000578630 STK32CQ86UX6 486 aa10.29□□□□□ -0.76
ERBB2-208ENST00000578630 DHFR2Q86XF0 187 aa10.29□□□□□ -0.76
ERBB2-208ENST00000578630 TUSC5Q8IXB3 177 aa10.29□□□□□ -0.76
ERBB2-208ENST00000578630 C10orf53Q8N6V4 93 aa10.29□□□□□ -0.76
ERBB2-208ENST00000578630 OR6K3Q8NGY3 331 aa10.29□□□□□ -0.76
ERBB2-208ENST00000578630 OR6S1Q8NH40 331 aa10.29□□□□□ -0.76
ERBB2-208ENST00000578630 ABHD3Q8WU67 409 aa10.29□□□□□ -0.76
ERBB2-208ENST00000578630 MCUR1Q96AQ8 359 aa10.29□□□□□ -0.76
ERBB2-208ENST00000578630 STARD4Q96DR4 205 aa10.29□□□□□ -0.76
ERBB2-208ENST00000578630 HSH2DQ96JZ2 352 aa10.29□□□□□ -0.76
ERBB2-208ENST00000578630 FNDC11Q9BVV2 318 aa10.29□□□□□ -0.76
ERBB2-208ENST00000578630 SF3B5Q9BWJ5 86 aaKnown RBP10.29□□□□□ -0.76
ERBB2-208ENST00000578630 AMBRA1Q9C0C7 1298 aa10.29□□□□□ -0.76
ERBB2-208ENST00000578630 PLSCR4Q9NRQ2 329 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms