RNA–Protein interactions for RNA: ENST00000577541.1

TOP2A-202, Transcript of DNA topoisomerase II alpha, humanhuman

TSL 2

Gene TOP2A, Length 420 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-202ENST00000577541 RIBC2Q9H4K1 309 aa1.3□□□□□ -2.2
TOP2A-202ENST00000577541 SMOXQ9NWM0 555 aa1.3□□□□□ -2.2
TOP2A-202ENST00000577541 C6orf203Q9P0P8 240 aaPredicted RBP1.3□□□□□ -2.2
TOP2A-202ENST00000577541 PHF11Q9UIL8 331 aa1.3□□□□□ -2.2
TOP2A-202ENST00000577541 TP53TG5Q9Y2B4 290 aa1.3□□□□□ -2.2
TOP2A-202ENST00000577541 AK6Q9Y3D8 172 aaKnown RBP1.3□□□□□ -2.2
TOP2A-202ENST00000577541 OR10H1Q9Y4A9 318 aa1.3□□□□□ -2.2
TOP2A-202ENST00000577541 OARD1Q9Y530 152 aa1.3□□□□□ -2.2
TOP2A-202ENST00000577541 MAB21L2Q9Y586 359 aa1.3□□□□□ -2.2
TOP2A-202ENST00000577541 TIMM10BQ9Y5J6 103 aa1.3□□□□□ -2.2
TOP2A-202ENST00000577541 SLIT3O75094 1523 aa1.3□□□□□ -2.2
TOP2A-202ENST00000577541 IGLV3-22A0A075B6J6 115 aa1.29□□□□□ -2.2
TOP2A-202ENST00000577541 IGHV2-70DA0A0C4DH43 119 aa1.29□□□□□ -2.2
TOP2A-202ENST00000577541 A8MUA0 341 aa1.29□□□□□ -2.2
TOP2A-202ENST00000577541 A8MUI8 341 aa1.29□□□□□ -2.2
TOP2A-202ENST00000577541 SULT2B1O00204 365 aa1.29□□□□□ -2.2
TOP2A-202ENST00000577541 CXCL11O14625 94 aa1.29□□□□□ -2.2
TOP2A-202ENST00000577541 MSH4O15457 936 aa1.29□□□□□ -2.2
TOP2A-202ENST00000577541 TAPBPO15533 448 aa1.29□□□□□ -2.2
TOP2A-202ENST00000577541 GNA14O95837 355 aa1.29□□□□□ -2.2
TOP2A-202ENST00000577541 INSP01308 110 aa1.29□□□□□ -2.2
TOP2A-202ENST00000577541 CT62P0C5K7 136 aa1.29□□□□□ -2.2
TOP2A-202ENST00000577541 ADRB3P13945 408 aa1.29□□□□□ -2.2
TOP2A-202ENST00000577541 ZNF823P16415 610 aa1.29□□□□□ -2.2
TOP2A-202ENST00000577541 PRDX3P30048 256 aaKnown RBP1.29□□□□□ -2.2
TOP2A-202ENST00000577541 GNPDA1P46926 289 aa1.29□□□□□ -2.2
TOP2A-202ENST00000577541 GSSP48637 474 aa1.29□□□□□ -2.2
TOP2A-202ENST00000577541 CSNK1DP48730 415 aa1.29□□□□□ -2.2
TOP2A-202ENST00000577541 GBX2P52951 348 aaPredicted RBP1.29□□□□□ -2.2
TOP2A-202ENST00000577541 AIF1P55008 147 aa1.29□□□□□ -2.2
TOP2A-202ENST00000577541 SPIBQ01892 262 aa1.29□□□□□ -2.2
TOP2A-202ENST00000577541 TNFRSF17Q02223 184 aa1.29□□□□□ -2.2
TOP2A-202ENST00000577541 MAP2K1Q02750 393 aaPredicted RBP1.29□□□□□ -2.2
TOP2A-202ENST00000577541 ZNF763Q0D2J5 394 aa1.29□□□□□ -2.2
TOP2A-202ENST00000577541 PDZK1Q5T2W1 519 aa1.29□□□□□ -2.2
TOP2A-202ENST00000577541 TSPO2Q5TGU0 170 aa1.29□□□□□ -2.2
TOP2A-202ENST00000577541 TPGS2Q68CL5 300 aa1.29□□□□□ -2.2
TOP2A-202ENST00000577541 CENPPQ6IPU0 288 aa1.29□□□□□ -2.2
TOP2A-202ENST00000577541 FAHD2BQ6P2I3 314 aaPredicted RBP1.29□□□□□ -2.2
TOP2A-202ENST00000577541 ZFP2Q6ZN57 461 aa1.29□□□□□ -2.2
TOP2A-202ENST00000577541 TMEM252Q8N6L7 170 aa1.29□□□□□ -2.2
TOP2A-202ENST00000577541 SDR9C7Q8NEX9 313 aa1.29□□□□□ -2.2
TOP2A-202ENST00000577541 AENQ8WTP8 325 aaKnown RBP1.29□□□□□ -2.2
TOP2A-202ENST00000577541 SCFD1Q8WVM8 642 aa1.29□□□□□ -2.2
TOP2A-202ENST00000577541 RDH5Q92781 318 aa1.29□□□□□ -2.2
TOP2A-202ENST00000577541 FGF11Q92914 225 aa1.29□□□□□ -2.2
TOP2A-202ENST00000577541 LRRC58Q96CX6 371 aa1.29□□□□□ -2.2
TOP2A-202ENST00000577541 FAHD2AQ96GK7 314 aa1.29□□□□□ -2.2
TOP2A-202ENST00000577541 MS4A14Q96JA4 679 aa1.29□□□□□ -2.2
TOP2A-202ENST00000577541 C12orf42Q96LP6 360 aa1.29□□□□□ -2.2
TOP2A-202ENST00000577541 SLC38A2Q96QD8 506 aa1.29□□□□□ -2.2
TOP2A-202ENST00000577541 NPAS2Q99743 824 aa1.29□□□□□ -2.2
TOP2A-202ENST00000577541 RSPO3Q9BXY4 272 aaPredicted RBP1.29□□□□□ -2.2
TOP2A-202ENST00000577541 CAPS2Q9BXY5 557 aa1.29□□□□□ -2.2
TOP2A-202ENST00000577541 DUSP16Q9BY84 665 aa1.29□□□□□ -2.2
TOP2A-202ENST00000577541 NXF5Q9H1B4 397 aaKnown RBP1.29□□□□□ -2.2
TOP2A-202ENST00000577541 VCXQ9H320 206 aa1.29□□□□□ -2.2
TOP2A-202ENST00000577541 LRRN3Q9H3W5 708 aa1.29□□□□□ -2.2
TOP2A-202ENST00000577541 POPDC2Q9HBU9 364 aa1.29□□□□□ -2.2
TOP2A-202ENST00000577541 PCSK1NQ9UHG2 260 aa1.29□□□□□ -2.2
TOP2A-202ENST00000577541 CRLS1Q9UJA2 301 aa1.29□□□□□ -2.2
TOP2A-202ENST00000577541 SNX6Q9UNH7 406 aa1.29□□□□□ -2.2
TOP2A-202ENST00000577541 IFT52Q9Y366 437 aa1.29□□□□□ -2.2
TOP2A-202ENST00000577541 ALG6Q9Y672 507 aa1.29□□□□□ -2.2
TOP2A-202ENST00000577541 SPACA6W5XKT8 324 aa1.29□□□□□ -2.2
TOP2A-202ENST00000577541 THSD7BQ9C0I4 1608 aa1.29□□□□□ -2.2
TOP2A-202ENST00000577541 CHD4Q14839 1912 aa1.28□□□□□ -2.2
TOP2A-202ENST00000577541 TRAV26-1A0A087WT03 109 aa1.28□□□□□ -2.2
TOP2A-202ENST00000577541 A0A1B0GUS0 222 aa1.28□□□□□ -2.2
TOP2A-202ENST00000577541 MBLAC1A4D2B0 266 aaPredicted RBP1.28□□□□□ -2.2
TOP2A-202ENST00000577541 GPR89AB7ZAQ6 455 aa1.28□□□□□ -2.2
TOP2A-202ENST00000577541 CPLX1O14810 134 aa1.28□□□□□ -2.2
TOP2A-202ENST00000577541 ZNF264O43296 627 aa1.28□□□□□ -2.2
TOP2A-202ENST00000577541 PRKYO43930 277 aa1.28□□□□□ -2.2
TOP2A-202ENST00000577541 HCN1O60741 890 aa1.28□□□□□ -2.2
TOP2A-202ENST00000577541 SNAPINO95295 136 aa1.28□□□□□ -2.2
TOP2A-202ENST00000577541 ADCY5O95622 1261 aa1.28□□□□□ -2.2
TOP2A-202ENST00000577541 STAMBPO95630 424 aa1.28□□□□□ -2.2
TOP2A-202ENST00000577541 LGI1O95970 557 aa1.28□□□□□ -2.2
TOP2A-202ENST00000577541 IGHG4P01861 327 aa1.28□□□□□ -2.2
TOP2A-202ENST00000577541 MMP1P03956 469 aa1.28□□□□□ -2.2
TOP2A-202ENST00000577541 PCCAP05165 728 aaPredicted RBP1.28□□□□□ -2.2
TOP2A-202ENST00000577541 CD5P06127 495 aa1.28□□□□□ -2.2
TOP2A-202ENST00000577541 GPR89BP0CG08 455 aa1.28□□□□□ -2.2
TOP2A-202ENST00000577541 PNMTP11086 282 aa1.28□□□□□ -2.2
TOP2A-202ENST00000577541 IGFBP3P17936 291 aaPredicted RBP1.28□□□□□ -2.2
TOP2A-202ENST00000577541 SERPINA2P20848 420 aa1.28□□□□□ -2.2
TOP2A-202ENST00000577541 PTMSP20962 102 aa1.28□□□□□ -2.2
TOP2A-202ENST00000577541 OTX2P32243 289 aa1.28□□□□□ -2.2
TOP2A-202ENST00000577541 LEPP41159 167 aa1.28□□□□□ -2.2
TOP2A-202ENST00000577541 QARSP47897 775 aaKnown RBP1.28□□□□□ -2.2
TOP2A-202ENST00000577541 PRKXP51817 358 aa1.28□□□□□ -2.2
TOP2A-202ENST00000577541 ZNF136P52737 540 aa1.28□□□□□ -2.2
TOP2A-202ENST00000577541 OSTNP61366 133 aa1.28□□□□□ -2.2
TOP2A-202ENST00000577541 REG3AQ06141 175 aa1.28□□□□□ -2.2
TOP2A-202ENST00000577541 BST1Q10588 318 aa1.28□□□□□ -2.2
TOP2A-202ENST00000577541 MOBPQ13875 183 aa1.28□□□□□ -2.2
TOP2A-202ENST00000577541 SLC15A2Q16348 729 aa1.28□□□□□ -2.2
TOP2A-202ENST00000577541 NSUN5P1Q3KNT7 163 aa1.28□□□□□ -2.2
TOP2A-202ENST00000577541 BCL7AQ4VC05 210 aa1.28□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms