RNA–Protein interactions for RNA: ENST00000577210.5

COPS3-213, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 752 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-213ENST00000577210 ALKBH6Q3KRA9 238 aa1.84□□□□□ -2.11
COPS3-213ENST00000577210 CARD17Q5XLA6 110 aa1.84□□□□□ -2.11
COPS3-213ENST00000577210 CLEC2AQ6UVW9 174 aa1.84□□□□□ -2.11
COPS3-213ENST00000577210 NLRP9Q7RTR0 991 aa1.84□□□□□ -2.11
COPS3-213ENST00000577210 TPRA1Q86W33 373 aa1.84□□□□□ -2.11
COPS3-213ENST00000577210 TRIM69Q86WT6 500 aa1.84□□□□□ -2.11
COPS3-213ENST00000577210 ECHDC2Q86YB7 292 aa1.84□□□□□ -2.11
COPS3-213ENST00000577210 NRMQ8IXM6 262 aa1.84□□□□□ -2.11
COPS3-213ENST00000577210 GPR65Q8IYL9 337 aa1.84□□□□□ -2.11
COPS3-213ENST00000577210 RNF175Q8N4F7 328 aa1.84□□□□□ -2.11
COPS3-213ENST00000577210 SPATA4Q8NEY3 305 aa1.84□□□□□ -2.11
COPS3-213ENST00000577210 LINC01006Q8NI28 216 aa1.84□□□□□ -2.11
COPS3-213ENST00000577210 KCNG3Q8TAE7 436 aa1.84□□□□□ -2.11
COPS3-213ENST00000577210 FAM81AQ8TBF8 368 aa1.84□□□□□ -2.11
COPS3-213ENST00000577210 BRSK1Q8TDC3 778 aa1.84□□□□□ -2.11
COPS3-213ENST00000577210 RAPGEF5Q92565 580 aa1.84□□□□□ -2.11
COPS3-213ENST00000577210 NEIL2Q969S2 332 aa1.84□□□□□ -2.11
COPS3-213ENST00000577210 UBE2E3Q969T4 207 aa1.84□□□□□ -2.11
COPS3-213ENST00000577210 PSMG2Q969U7 264 aa1.84□□□□□ -2.11
COPS3-213ENST00000577210 EFHD2Q96C19 240 aaPredicted RBP1.84□□□□□ -2.11
COPS3-213ENST00000577210 PANX1Q96RD7 426 aa1.84□□□□□ -2.11
COPS3-213ENST00000577210 CENPKQ9BS16 269 aa1.84□□□□□ -2.11
COPS3-213ENST00000577210 TRIM62Q9BVG3 475 aa1.84□□□□□ -2.11
COPS3-213ENST00000577210 NAT10Q9H0A0 1025 aaKnown RBP1.84□□□□□ -2.11
COPS3-213ENST00000577210 AZI2Q9H6S1 392 aa1.84□□□□□ -2.11
COPS3-213ENST00000577210 PTGES2Q9H7Z7 377 aa1.84□□□□□ -2.11
COPS3-213ENST00000577210 CAB39LQ9H9S4 337 aa1.84□□□□□ -2.11
COPS3-213ENST00000577210 PDFQ9HBH1 243 aa1.84□□□□□ -2.11
COPS3-213ENST00000577210 POPDC2Q9HBU9 364 aa1.84□□□□□ -2.11
COPS3-213ENST00000577210 KLHL28Q9NXS3 571 aa1.84□□□□□ -2.11
COPS3-213ENST00000577210 TMEM9Q9P0T7 183 aa1.84□□□□□ -2.11
COPS3-213ENST00000577210 OR1A1Q9P1Q5 309 aa1.84□□□□□ -2.11
COPS3-213ENST00000577210 Q9UF83 564 aa1.84□□□□□ -2.11
COPS3-213ENST00000577210 ZNF639Q9UID6 485 aa1.84□□□□□ -2.11
COPS3-213ENST00000577210 KIAA1257Q9ULG3 409 aa1.84□□□□□ -2.11
COPS3-213ENST00000577210 MOKQ9UQ07 419 aa1.84□□□□□ -2.11
COPS3-213ENST00000577210 AK6Q9Y3D8 172 aaKnown RBP1.84□□□□□ -2.11
COPS3-213ENST00000577210 PHLPP2Q6ZVD8 1323 aa1.84□□□□□ -2.12
COPS3-213ENST00000577210 TTC21BQ7Z4L5 1316 aa1.84□□□□□ -2.12
COPS3-213ENST00000577210 PLEKHH1Q9ULM0 1364 aa1.84□□□□□ -2.12
COPS3-213ENST00000577210 IGHV2-70DA0A0C4DH43 119 aa1.83□□□□□ -2.12
COPS3-213ENST00000577210 A0A0U1RQS6 177 aa1.83□□□□□ -2.12
COPS3-213ENST00000577210 A0A1B0GUS0 222 aa1.83□□□□□ -2.12
COPS3-213ENST00000577210 ZFP92A6NM28 416 aa1.83□□□□□ -2.12
COPS3-213ENST00000577210 PP2D1A8MPX8 630 aa1.83□□□□□ -2.12
COPS3-213ENST00000577210 H0Y9J4 135 aa1.83□□□□□ -2.12
COPS3-213ENST00000577210 GOLGA8SH3BPF8 625 aa1.83□□□□□ -2.12
COPS3-213ENST00000577210 K7ENP7 123 aa1.83□□□□□ -2.12
COPS3-213ENST00000577210 SULT2B1O00204 365 aa1.83□□□□□ -2.12
COPS3-213ENST00000577210 HAS3O00219 553 aa1.83□□□□□ -2.12
COPS3-213ENST00000577210 CASQ2O14958 399 aaPredicted RBP1.83□□□□□ -2.12
COPS3-213ENST00000577210 CACNG3O60359 315 aa1.83□□□□□ -2.12
COPS3-213ENST00000577210 OR10H3O60404 316 aa1.83□□□□□ -2.12
COPS3-213ENST00000577210 HCN1O60741 890 aa1.83□□□□□ -2.12
COPS3-213ENST00000577210 AP2A1O95782 977 aa1.83□□□□□ -2.12
COPS3-213ENST00000577210 TSPAN12O95859 305 aa1.83□□□□□ -2.12
COPS3-213ENST00000577210 NDUFB10O96000 172 aa1.83□□□□□ -2.12
COPS3-213ENST00000577210 AGTP01019 485 aa1.83□□□□□ -2.12
COPS3-213ENST00000577210 IGLV1-47P01700 117 aa1.83□□□□□ -2.12
COPS3-213ENST00000577210 IGHV3-23P01764 117 aa1.83□□□□□ -2.12
COPS3-213ENST00000577210 KRTAP1-4P0C5Y4 121 aa1.83□□□□□ -2.12
COPS3-213ENST00000577210 CCDC166P0CW27 439 aa1.83□□□□□ -2.12
COPS3-213ENST00000577210 TROVE2P10155 538 aaKnown RBP eCLIP1.83□□□□□ -2.12
COPS3-213ENST00000577210 ANXA8P13928 327 aa1.83□□□□□ -2.12
COPS3-213ENST00000577210 ATP1B2P14415 290 aaPredicted RBP1.83□□□□□ -2.12
COPS3-213ENST00000577210 TNNI1P19237 187 aa1.83□□□□□ -2.12
COPS3-213ENST00000577210 ZBTB25P24278 435 aa1.83□□□□□ -2.12
COPS3-213ENST00000577210 GSSP48637 474 aa1.83□□□□□ -2.12
COPS3-213ENST00000577210 EFNB2P52799 333 aa1.83□□□□□ -2.12
COPS3-213ENST00000577210 DIO3P55073 304 aa1.83□□□□□ -2.12
COPS3-213ENST00000577210 PRMT2P55345 433 aa1.83□□□□□ -2.12
COPS3-213ENST00000577210 RPS8P62241 208 aaKnown RBP1.83□□□□□ -2.12
COPS3-213ENST00000577210 IDI1Q13907 227 aa1.83□□□□□ -2.12
COPS3-213ENST00000577210 DPYSL3Q14195 570 aa1.83□□□□□ -2.12
COPS3-213ENST00000577210 ARL6IP1Q15041 203 aa1.83□□□□□ -2.12
COPS3-213ENST00000577210 PPP1R7Q15435 360 aa1.83□□□□□ -2.12
COPS3-213ENST00000577210 MRPL23Q16540 153 aaKnown RBP1.83□□□□□ -2.12
COPS3-213ENST00000577210 AANATQ16613 207 aa1.83□□□□□ -2.12
COPS3-213ENST00000577210 C6orf226Q5I0X4 101 aa1.83□□□□□ -2.12
COPS3-213ENST00000577210 CTSL3PQ5NE16 218 aa1.83□□□□□ -2.12
COPS3-213ENST00000577210 BEND3Q5T5X7 828 aa1.83□□□□□ -2.12
COPS3-213ENST00000577210 ANXA8L1Q5VT79 327 aa1.83□□□□□ -2.12
COPS3-213ENST00000577210 RNASEKQ6P5S7 137 aaKnown RBP1.83□□□□□ -2.12
COPS3-213ENST00000577210 FAM199XQ6PEV8 388 aaPredicted RBP1.83□□□□□ -2.12
COPS3-213ENST00000577210 CCDC137Q6PK04 289 aaKnown RBP1.83□□□□□ -2.12
COPS3-213ENST00000577210 METAP1DQ6UB28 335 aaPredicted RBP1.83□□□□□ -2.12
COPS3-213ENST00000577210 SCARA5Q6ZMJ2 495 aa1.83□□□□□ -2.12
COPS3-213ENST00000577210 HSD17B13Q7Z5P4 300 aaPredicted RBP1.83□□□□□ -2.12
COPS3-213ENST00000577210 LUZP2Q86TE4 346 aa1.83□□□□□ -2.12
COPS3-213ENST00000577210 TGIF2LXQ8IUE1 241 aa1.83□□□□□ -2.12
COPS3-213ENST00000577210 FBXO16Q8IX29 292 aaPredicted RBP1.83□□□□□ -2.12
COPS3-213ENST00000577210 BBS1Q8NFJ9 593 aa1.83□□□□□ -2.12
COPS3-213ENST00000577210 OR2L3Q8NG85 312 aa1.83□□□□□ -2.12
COPS3-213ENST00000577210 OR6C4Q8NGE1 309 aa1.83□□□□□ -2.12
COPS3-213ENST00000577210 OR2AP1Q8NGE2 309 aa1.83□□□□□ -2.12
COPS3-213ENST00000577210 OR2A12Q8NGT7 310 aa1.83□□□□□ -2.12
COPS3-213ENST00000577210 RAB3IL1Q8TBN0 382 aa1.83□□□□□ -2.12
COPS3-213ENST00000577210 PAQR8Q8TEZ7 354 aa1.83□□□□□ -2.12
COPS3-213ENST00000577210 ARNTL2Q8WYA1 636 aa1.83□□□□□ -2.12
COPS3-213ENST00000577210 STARD8Q92502 1023 aa1.83□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms