RNA–Protein interactions for RNA: ENST00000576940.1

NPLOC4-220, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 216 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-220ENST00000576940 STX11O75558 287 aa8.75□□□□□ -1.01
NPLOC4-220ENST00000576940 PDE5AO76074 875 aa8.75□□□□□ -1.01
NPLOC4-220ENST00000576940 KRT16P08779 473 aa8.75□□□□□ -1.01
NPLOC4-220ENST00000576940 CELA3BP08861 270 aa8.75□□□□□ -1.01
NPLOC4-220ENST00000576940 ADRA2AP08913 450 aa8.75□□□□□ -1.01
NPLOC4-220ENST00000576940 CREB1P16220 341 aa8.75□□□□□ -1.01
NPLOC4-220ENST00000576940 COL8A2P25067 703 aa8.75□□□□□ -1.01
NPLOC4-220ENST00000576940 ECHS1P30084 290 aa8.75□□□□□ -1.01
NPLOC4-220ENST00000576940 SLC1A3P43003 542 aa8.75□□□□□ -1.01
NPLOC4-220ENST00000576940 IDH2P48735 452 aaKnown RBP8.75□□□□□ -1.01
NPLOC4-220ENST00000576940 CLK1P49759 484 aaKnown RBP8.75□□□□□ -1.01
NPLOC4-220ENST00000576940 DNAJB13P59910 316 aa8.75□□□□□ -1.01
NPLOC4-220ENST00000576940 SLC35A1P78382 337 aa8.75□□□□□ -1.01
NPLOC4-220ENST00000576940 DEFA6Q01524 100 aa8.75□□□□□ -1.01
NPLOC4-220ENST00000576940 PTGR1Q14914 329 aa8.75□□□□□ -1.01
NPLOC4-220ENST00000576940 ARHGAP11BQ3KRB8 267 aa8.75□□□□□ -1.01
NPLOC4-220ENST00000576940 LSM12Q3MHD2 195 aaKnown RBP8.75□□□□□ -1.01
NPLOC4-220ENST00000576940 ATP6AP1LQ52LC2 224 aa8.75□□□□□ -1.01
NPLOC4-220ENST00000576940 PDLIM3Q53GG5 364 aaPredicted RBP8.75□□□□□ -1.01
NPLOC4-220ENST00000576940 FAHD2BQ6P2I3 314 aaPredicted RBP8.75□□□□□ -1.01
NPLOC4-220ENST00000576940 MYPOPQ86VE0 399 aaPredicted RBP8.75□□□□□ -1.01
NPLOC4-220ENST00000576940 GLCCI1Q86VQ1 547 aa8.75□□□□□ -1.01
NPLOC4-220ENST00000576940 KRTCAP2Q8N6L1 136 aa8.75□□□□□ -1.01
NPLOC4-220ENST00000576940 TMEM99Q8N816 258 aa8.75□□□□□ -1.01
NPLOC4-220ENST00000576940 EIF1ADQ8N9N8 165 aaKnown RBP8.75□□□□□ -1.01
NPLOC4-220ENST00000576940 MZB1Q8WU39 189 aa8.75□□□□□ -1.01
NPLOC4-220ENST00000576940 BCL2L2Q92843 193 aaPredicted RBP8.75□□□□□ -1.01
NPLOC4-220ENST00000576940 TMEM186Q96B77 213 aa8.75□□□□□ -1.01
NPLOC4-220ENST00000576940 FAHD2AQ96GK7 314 aa8.75□□□□□ -1.01
NPLOC4-220ENST00000576940 BOD1Q96IK1 185 aa8.75□□□□□ -1.01
NPLOC4-220ENST00000576940 FMO2Q99518 471 aa8.75□□□□□ -1.01
NPLOC4-220ENST00000576940 KATNB1Q9BVA0 655 aa8.75□□□□□ -1.01
NPLOC4-220ENST00000576940 TPK1Q9H3S4 243 aa8.75□□□□□ -1.01
NPLOC4-220ENST00000576940 OXSMQ9NWU1 459 aa8.75□□□□□ -1.01
NPLOC4-220ENST00000576940 TBK1Q9UHD2 729 aa8.75□□□□□ -1.01
NPLOC4-220ENST00000576940 TMED5Q9Y3A6 229 aa8.75□□□□□ -1.01
NPLOC4-220ENST00000576940 SPEF1Q9Y4P9 236 aa8.75□□□□□ -1.01
NPLOC4-220ENST00000576940 PCDHB14Q9Y5E9 798 aa8.75□□□□□ -1.01
NPLOC4-220ENST00000576940 DNAJC15Q9Y5T4 150 aa8.75□□□□□ -1.01
NPLOC4-220ENST00000576940 TMED7-TICAM2A0A0A6YYA0 188 aa8.74□□□□□ -1.01
NPLOC4-220ENST00000576940 TMEM233B4DJY2 109 aa8.74□□□□□ -1.01
NPLOC4-220ENST00000576940 EIF1BO60739 113 aaKnown RBP8.74□□□□□ -1.01
NPLOC4-220ENST00000576940 PEX11AO75192 247 aa8.74□□□□□ -1.01
NPLOC4-220ENST00000576940 KRT33AO76009 404 aa8.74□□□□□ -1.01
NPLOC4-220ENST00000576940 AKR7A3O95154 331 aa8.74□□□□□ -1.01
NPLOC4-220ENST00000576940 AVPP01185 164 aa8.74□□□□□ -1.01
NPLOC4-220ENST00000576940 PROCP04070 461 aa8.74□□□□□ -1.01
NPLOC4-220ENST00000576940 TCN1P20061 433 aaPredicted RBP8.74□□□□□ -1.01
NPLOC4-220ENST00000576940 NPR2P20594 1047 aa8.74□□□□□ -1.01
NPLOC4-220ENST00000576940 PCMT1P22061 227 aa8.74□□□□□ -1.01
NPLOC4-220ENST00000576940 FKBP2P26885 142 aaKnown RBP8.74□□□□□ -1.01
NPLOC4-220ENST00000576940 SOAT1P35610 550 aa8.74□□□□□ -1.01
NPLOC4-220ENST00000576940 HPCAL1P37235 193 aa8.74□□□□□ -1.01
NPLOC4-220ENST00000576940 HILS1P60008 231 aa8.74□□□□□ -1.01
NPLOC4-220ENST00000576940 UBE2NP61088 152 aaKnown RBP8.74□□□□□ -1.01
NPLOC4-220ENST00000576940 NAA20P61599 178 aa8.74□□□□□ -1.01
NPLOC4-220ENST00000576940 HBA1P69905 142 aa8.74□□□□□ -1.01
NPLOC4-220ENST00000576940 IL1RL1Q01638 556 aa8.74□□□□□ -1.01
NPLOC4-220ENST00000576940 PLAURQ03405 335 aa8.74□□□□□ -1.01
NPLOC4-220ENST00000576940 AWAT1Q58HT5 328 aa8.74□□□□□ -1.01
NPLOC4-220ENST00000576940 OTUD3Q5T2D3 398 aaPredicted RBP8.74□□□□□ -1.01
NPLOC4-220ENST00000576940 C1QTNF12Q5T7M4 302 aa8.74□□□□□ -1.01
NPLOC4-220ENST00000576940 TYW3Q6IPR3 259 aaKnown RBP8.74□□□□□ -1.01
NPLOC4-220ENST00000576940 EMBQ6PCB8 327 aa8.74□□□□□ -1.01
NPLOC4-220ENST00000576940 UGT2A3Q6UWM9 527 aa8.74□□□□□ -1.01
NPLOC4-220ENST00000576940 C1orf229Q6ZS94 237 aaPredicted RBP8.74□□□□□ -1.01
NPLOC4-220ENST00000576940 LINGO2Q7L985 606 aa8.74□□□□□ -1.01
NPLOC4-220ENST00000576940 GPAT4Q86UL3 456 aa8.74□□□□□ -1.01
NPLOC4-220ENST00000576940 CDK20Q8IZL9 346 aa8.74□□□□□ -1.01
NPLOC4-220ENST00000576940 POMGNT2Q8NAT1 580 aa8.74□□□□□ -1.01
NPLOC4-220ENST00000576940 FAM71CQ8NEG0 241 aa8.74□□□□□ -1.01
NPLOC4-220ENST00000576940 OR4F15Q8NGB8 312 aa8.74□□□□□ -1.01
NPLOC4-220ENST00000576940 OR9K2Q8NGE7 335 aa8.74□□□□□ -1.01
NPLOC4-220ENST00000576940 CLDND2Q8NHS1 167 aa8.74□□□□□ -1.01
NPLOC4-220ENST00000576940 SFXN5Q8TD22 340 aa8.74□□□□□ -1.01
NPLOC4-220ENST00000576940 ACMSDQ8TDX5 336 aa8.74□□□□□ -1.01
NPLOC4-220ENST00000576940 TMEM45BQ96B21 275 aa8.74□□□□□ -1.01
NPLOC4-220ENST00000576940 COQ8BQ96D53 544 aa8.74□□□□□ -1.01
NPLOC4-220ENST00000576940 LRRC37BQ96QE4 947 aa8.74□□□□□ -1.01
NPLOC4-220ENST00000576940 ZNF350Q9GZX5 532 aa8.74□□□□□ -1.01
NPLOC4-220ENST00000576940 TSPYL1Q9H0U9 437 aa8.74□□□□□ -1.01
NPLOC4-220ENST00000576940 OBP2BQ9NPH6 170 aa8.74□□□□□ -1.01
NPLOC4-220ENST00000576940 TREM2Q9NZC2 230 aa8.74□□□□□ -1.01
NPLOC4-220ENST00000576940 CRNNQ9UBG3 495 aaPredicted RBP8.74□□□□□ -1.01
NPLOC4-220ENST00000576940 OSGIN1Q9UJX0 560 aa8.74□□□□□ -1.01
NPLOC4-220ENST00000576940 RAB21Q9UL25 225 aa8.74□□□□□ -1.01
NPLOC4-220ENST00000576940 TMED7Q9Y3B3 224 aa8.74□□□□□ -1.01
NPLOC4-220ENST00000576940 PCDHGB1Q9Y5G3 927 aa8.74□□□□□ -1.01
NPLOC4-220ENST00000576940 OR6C65A6NJZ3 312 aa8.73□□□□□ -1.01
NPLOC4-220ENST00000576940 DUXAA6NLW8 204 aa8.73□□□□□ -1.01
NPLOC4-220ENST00000576940 VSTM5A8MXK1 200 aa8.73□□□□□ -1.01
NPLOC4-220ENST00000576940 TMEM114B3SHH9 223 aa8.73□□□□□ -1.01
NPLOC4-220ENST00000576940 AP3D1O14617 1153 aa8.73□□□□□ -1.01
NPLOC4-220ENST00000576940 TMPRSS2O15393 492 aa8.73□□□□□ -1.01
NPLOC4-220ENST00000576940 PLIN3O60664 434 aa8.73□□□□□ -1.01
NPLOC4-220ENST00000576940 UPK3AO75631 287 aa8.73□□□□□ -1.01
NPLOC4-220ENST00000576940 IGLV1-44P01699 117 aa8.73□□□□□ -1.01
NPLOC4-220ENST00000576940 ERCC1P07992 297 aaPredicted RBP8.73□□□□□ -1.01
NPLOC4-220ENST00000576940 OR12D1P0DN82 309 aa8.73□□□□□ -1.01
NPLOC4-220ENST00000576940 NEFHP12036 1026 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms