RNA–Protein interactions for RNA: ENST00000575176.5

SMG6-216, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-216ENST00000575176 EEF1A1P5Q5VTE0 462 aa7.68□□□□□ -1.18
SMG6-216ENST00000575176 PAQR6Q6TCH4 344 aa7.68□□□□□ -1.18
SMG6-216ENST00000575176 SPATA21Q7Z572 469 aa7.68□□□□□ -1.18
SMG6-216ENST00000575176 TSEN54Q7Z6J9 526 aaKnown RBP7.68□□□□□ -1.18
SMG6-216ENST00000575176 MTDHQ86UE4 582 aaKnown RBP7.68□□□□□ -1.18
SMG6-216ENST00000575176 KRTAP1-3Q8IUG1 177 aa7.68□□□□□ -1.18
SMG6-216ENST00000575176 SMYD1Q8NB12 490 aa7.68□□□□□ -1.18
SMG6-216ENST00000575176 C11orf65Q8NCR3 313 aa7.68□□□□□ -1.18
SMG6-216ENST00000575176 OR6T1Q8NGN1 323 aa7.68□□□□□ -1.18
SMG6-216ENST00000575176 ZNF563Q8TA94 476 aa7.68□□□□□ -1.18
SMG6-216ENST00000575176 KTI12Q96EK9 354 aaPredicted RBP7.68□□□□□ -1.18
SMG6-216ENST00000575176 REXO5Q96IC2 774 aaKnown RBP7.68□□□□□ -1.18
SMG6-216ENST00000575176 DACH2Q96NX9 599 aa7.68□□□□□ -1.18
SMG6-216ENST00000575176 PRSS27Q9BQR3 290 aa7.68□□□□□ -1.18
SMG6-216ENST00000575176 ZNF559Q9BR84 538 aa7.68□□□□□ -1.18
SMG6-216ENST00000575176 POTEKPQ9BYX7 375 aa7.68□□□□□ -1.18
SMG6-216ENST00000575176 AMBRA1Q9C0C7 1298 aa7.68□□□□□ -1.18
SMG6-216ENST00000575176 C12orf49Q9H741 205 aa7.68□□□□□ -1.18
SMG6-216ENST00000575176 C12orf10Q9HB07 376 aa7.68□□□□□ -1.18
SMG6-216ENST00000575176 ELOVL5Q9NYP7 299 aa7.68□□□□□ -1.18
SMG6-216ENST00000575176 TMEM181Q9P2C4 612 aa7.68□□□□□ -1.18
SMG6-216ENST00000575176 MALT1Q9UDY8 824 aa7.68□□□□□ -1.18
SMG6-216ENST00000575176 TESQ9UGI8 421 aaKnown RBP7.68□□□□□ -1.18
SMG6-216ENST00000575176 PRDM4Q9UKN5 801 aa7.68□□□□□ -1.18
SMG6-216ENST00000575176 PROCRQ9UNN8 238 aa7.68□□□□□ -1.18
SMG6-216ENST00000575176 EMC9Q9Y3B6 208 aa7.68□□□□□ -1.18
SMG6-216ENST00000575176 FLVCR1Q9Y5Y0 555 aa7.68□□□□□ -1.18
SMG6-216ENST00000575176 MED13LQ71F56 2210 aa7.68□□□□□ -1.18
SMG6-216ENST00000575176 TUBAL3A6NHL2 446 aa7.67□□□□□ -1.18
SMG6-216ENST00000575176 CCT8L1PA6NM43 557 aa7.67□□□□□ -1.18
SMG6-216ENST00000575176 FAM220BPB1ANY3 271 aa7.67□□□□□ -1.18
SMG6-216ENST00000575176 SULT2B1O00204 365 aa7.67□□□□□ -1.18
SMG6-216ENST00000575176 KLF4O43474 513 aa7.67□□□□□ -1.18
SMG6-216ENST00000575176 FMO6PO60774 539 aa7.67□□□□□ -1.18
SMG6-216ENST00000575176 PRKD3O94806 890 aa7.67□□□□□ -1.18
SMG6-216ENST00000575176 SYNGR4O95473 234 aa7.67□□□□□ -1.18
SMG6-216ENST00000575176 NPPAP01160 153 aa7.67□□□□□ -1.18
SMG6-216ENST00000575176 YES1P07947 543 aa7.67□□□□□ -1.18
SMG6-216ENST00000575176 ITGA5P08648 1049 aa7.67□□□□□ -1.18
SMG6-216ENST00000575176 COX4I1P13073 169 aa7.67□□□□□ -1.18
SMG6-216ENST00000575176 POU2F1P14859 743 aa7.67□□□□□ -1.18
SMG6-216ENST00000575176 CCNA2P20248 432 aa7.67□□□□□ -1.18
SMG6-216ENST00000575176 TNFRSF1BP20333 461 aa7.67□□□□□ -1.18
SMG6-216ENST00000575176 IGHV1-2P23083 117 aa7.67□□□□□ -1.18
SMG6-216ENST00000575176 PEX19P40855 299 aa7.67□□□□□ -1.18
SMG6-216ENST00000575176 CPA2P48052 419 aa7.67□□□□□ -1.18
SMG6-216ENST00000575176 MAP2K6P52564 334 aa7.67□□□□□ -1.18
SMG6-216ENST00000575176 SLC25A3Q00325 362 aa7.67□□□□□ -1.18
SMG6-216ENST00000575176 RASGEF1BQ0VAM2 473 aa7.67□□□□□ -1.18
SMG6-216ENST00000575176 GNA13Q14344 377 aa7.67□□□□□ -1.18
SMG6-216ENST00000575176 TSC22D1Q15714 1073 aa7.67□□□□□ -1.18
SMG6-216ENST00000575176 PDSS1Q5T2R2 415 aa7.67□□□□□ -1.18
SMG6-216ENST00000575176 C1orf140Q5VVS0 124 aa7.67□□□□□ -1.18
SMG6-216ENST00000575176 FAM91A1Q658Y4 838 aa7.67□□□□□ -1.18
SMG6-216ENST00000575176 Q6ZT83 130 aa7.67□□□□□ -1.18
SMG6-216ENST00000575176 LINGO2Q7L985 606 aa7.67□□□□□ -1.18
SMG6-216ENST00000575176 CHMP1BQ7LBR1 199 aa7.67□□□□□ -1.18
SMG6-216ENST00000575176 PIGWQ7Z7B1 504 aa7.67□□□□□ -1.18
SMG6-216ENST00000575176 CDH24Q86UP0 819 aa7.67□□□□□ -1.18
SMG6-216ENST00000575176 CXorf67Q86X51 503 aaPredicted RBP7.67□□□□□ -1.18
SMG6-216ENST00000575176 CDC20BQ86Y33 519 aa7.67□□□□□ -1.18
SMG6-216ENST00000575176 LURAP1LQ8IV03 231 aa7.67□□□□□ -1.18
SMG6-216ENST00000575176 SLC15A3Q8IY34 581 aa7.67□□□□□ -1.18
SMG6-216ENST00000575176 SLC43A2Q8N370 569 aa7.67□□□□□ -1.18
SMG6-216ENST00000575176 CADM2Q8N3J6 435 aa7.67□□□□□ -1.18
SMG6-216ENST00000575176 TMEM99Q8N816 258 aa7.67□□□□□ -1.18
SMG6-216ENST00000575176 SLC38A4Q969I6 547 aa7.67□□□□□ -1.18
SMG6-216ENST00000575176 TMEM45BQ96B21 275 aa7.67□□□□□ -1.18
SMG6-216ENST00000575176 SLC41A3Q96GZ6 507 aa7.67□□□□□ -1.18
SMG6-216ENST00000575176 ZNF385AQ96PM9 386 aaKnown RBP7.67□□□□□ -1.18
SMG6-216ENST00000575176 TMEM204Q9BSN7 226 aa7.67□□□□□ -1.18
SMG6-216ENST00000575176 NELFAQ9H3P2 528 aa7.67□□□□□ -1.18
SMG6-216ENST00000575176 KLHL28Q9NXS3 571 aa7.67□□□□□ -1.18
SMG6-216ENST00000575176 KLHL9Q9P2J3 617 aa7.67□□□□□ -1.18
SMG6-216ENST00000575176 STOML1Q9UBI4 398 aa7.67□□□□□ -1.18
SMG6-216ENST00000575176 ANGPT4Q9Y264 503 aa7.67□□□□□ -1.18
SMG6-216ENST00000575176 CHD3Q12873 2000 aaKnown RBP7.66□□□□□ -1.18
SMG6-216ENST00000575176 A0A087WUJ7 227 aa7.66□□□□□ -1.18
SMG6-216ENST00000575176 LOC100653049A0A140TA62 436 aa7.66□□□□□ -1.18
SMG6-216ENST00000575176 A8MVM7 634 aa7.66□□□□□ -1.18
SMG6-216ENST00000575176 EVPLLA8MZ36 301 aa7.66□□□□□ -1.18
SMG6-216ENST00000575176 LRRN3E7EW58 273 aa7.66□□□□□ -1.18
SMG6-216ENST00000575176 M0QX08 132 aa7.66□□□□□ -1.18
SMG6-216ENST00000575176 TRAF3IP2O43734 574 aaPredicted RBP7.66□□□□□ -1.18
SMG6-216ENST00000575176 SHOX2O60902 331 aaPredicted RBP7.66□□□□□ -1.18
SMG6-216ENST00000575176 KRT34O76011 436 aa7.66□□□□□ -1.18
SMG6-216ENST00000575176 ZNF432O94892 652 aa7.66□□□□□ -1.18
SMG6-216ENST00000575176 PRSS23O95084 383 aa7.66□□□□□ -1.18
SMG6-216ENST00000575176 GOSR1O95249 250 aa7.66□□□□□ -1.18
SMG6-216ENST00000575176 HPRP00739 348 aa7.66□□□□□ -1.18
SMG6-216ENST00000575176 BGLAPP02818 100 aa7.66□□□□□ -1.18
SMG6-216ENST00000575176 C8BP07358 591 aa7.66□□□□□ -1.18
SMG6-216ENST00000575176 PNMTP11086 282 aa7.66□□□□□ -1.18
SMG6-216ENST00000575176 PTNP21246 168 aa7.66□□□□□ -1.18
SMG6-216ENST00000575176 FPR1P21462 350 aa7.66□□□□□ -1.18
SMG6-216ENST00000575176 DNAJA1P31689 397 aaKnown RBP7.66□□□□□ -1.18
SMG6-216ENST00000575176 IDUAP35475 653 aa7.66□□□□□ -1.18
SMG6-216ENST00000575176 CDH12P55289 794 aa7.66□□□□□ -1.18
SMG6-216ENST00000575176 CSNK2A1P68400 391 aaPredicted RBP7.66□□□□□ -1.18
SMG6-216ENST00000575176 LGALS3BPQ08380 585 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms