RNA–Protein interactions for RNA: ENST00000574428.5

ATPAF1-213, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 1 (best) BASIC

Gene ATPAF1, Length 1,760 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-213ENST00000574428 OR13C2Q8NGS9 318 aa21.69■■□□□ 1.06
ATPAF1-213ENST00000574428 STK35Q8TDR2 534 aa21.69■■□□□ 1.06
ATPAF1-213ENST00000574428 TFAP2CQ92754 450 aa21.69■■□□□ 1.06
ATPAF1-213ENST00000574428 DTNBP1Q96EV8 351 aa21.69■■□□□ 1.06
ATPAF1-213ENST00000574428 MOGAT1Q96PD6 335 aa21.69■■□□□ 1.06
ATPAF1-213ENST00000574428 ADI1Q9BV57 179 aa21.69■■□□□ 1.06
ATPAF1-213ENST00000574428 MRPS18CQ9Y3D5 142 aaKnown RBP21.69■■□□□ 1.06
ATPAF1-213ENST00000574428 TRAV36DV7A0A075B6V5 113 aa21.69■■□□□ 1.06
ATPAF1-213ENST00000574428 UNC119BA6NIH7 251 aa21.69■■□□□ 1.06
ATPAF1-213ENST00000574428 ZNF208O43345 1280 aa21.69■■□□□ 1.06
ATPAF1-213ENST00000574428 HPNP05981 417 aa21.69■■□□□ 1.06
ATPAF1-213ENST00000574428 CDH2P19022 906 aaPredicted RBP21.69■■□□□ 1.06
ATPAF1-213ENST00000574428 GSTM3P21266 225 aa21.69■■□□□ 1.06
ATPAF1-213ENST00000574428 SHC1P29353 583 aa21.69■■□□□ 1.06
ATPAF1-213ENST00000574428 ZNF800Q2TB10 664 aaPredicted RBP eCLIP21.69■■□□□ 1.06
ATPAF1-213ENST00000574428 Q6ZS92 163 aa21.69■■□□□ 1.06
ATPAF1-213ENST00000574428 SLC46A3Q7Z3Q1 461 aa21.69■■□□□ 1.06
ATPAF1-213ENST00000574428 KIF18BQ86Y91 864 aa21.69■■□□□ 1.06
ATPAF1-213ENST00000574428 FAM98AQ8NCA5 519 aaKnown RBP21.69■■□□□ 1.06
ATPAF1-213ENST00000574428 DDIT4LQ96D03 193 aa21.69■■□□□ 1.06
ATPAF1-213ENST00000574428 ARL5BQ96KC2 179 aa21.69■■□□□ 1.06
ATPAF1-213ENST00000574428 PTDSS2Q9BVG9 487 aa21.69■■□□□ 1.06
ATPAF1-213ENST00000574428 GABARAPL3Q9BY60 117 aa21.69■■□□□ 1.06
ATPAF1-213ENST00000574428 ANKRD60Q9BZ19 345 aa21.69■■□□□ 1.06
ATPAF1-213ENST00000574428 SPIN1Q9Y657 262 aaPredicted RBP21.69■■□□□ 1.06
ATPAF1-213ENST00000574428 ZZEF1O43149 2961 aa21.68■■□□□ 1.06
ATPAF1-213ENST00000574428 MPDZO75970 2070 aa21.68■■□□□ 1.06
ATPAF1-213ENST00000574428 ACOT7O00154 380 aa21.68■■□□□ 1.06
ATPAF1-213ENST00000574428 TP53P04637 393 aaPredicted RBP21.68■■□□□ 1.06
ATPAF1-213ENST00000574428 OSMP13725 252 aa21.68■■□□□ 1.06
ATPAF1-213ENST00000574428 ELK4P28324 431 aa21.68■■□□□ 1.06
ATPAF1-213ENST00000574428 SFTPDP35247 375 aa21.68■■□□□ 1.06
ATPAF1-213ENST00000574428 COX10Q12887 443 aa21.68■■□□□ 1.06
ATPAF1-213ENST00000574428 ZNF74Q16587 644 aa21.68■■□□□ 1.06
ATPAF1-213ENST00000574428 LINC00303Q3SY05 128 aa21.68■■□□□ 1.06
ATPAF1-213ENST00000574428 SLC36A3Q495N2 470 aa21.68■■□□□ 1.06
ATPAF1-213ENST00000574428 SYT14P1Q58G82 188 aa21.68■■□□□ 1.06
ATPAF1-213ENST00000574428 ASB18Q6ZVZ8 466 aa21.68■■□□□ 1.06
ATPAF1-213ENST00000574428 SFXN2Q96NB2 322 aa21.68■■□□□ 1.06
ATPAF1-213ENST00000574428 EGLN3Q9H6Z9 239 aa21.68■■□□□ 1.06
ATPAF1-213ENST00000574428 ZNF337Q9Y3M9 751 aa21.68■■□□□ 1.06
ATPAF1-213ENST00000574428 H3BN98 237 aa21.67■■□□□ 1.06
ATPAF1-213ENST00000574428 OR7A10O76100 309 aa21.67■■□□□ 1.06
ATPAF1-213ENST00000574428 AHSA1O95433 338 aa21.67■■□□□ 1.06
ATPAF1-213ENST00000574428 IGF2P01344 180 aa21.67■■□□□ 1.06
ATPAF1-213ENST00000574428 POU1F1P28069 291 aa21.67■■□□□ 1.06
ATPAF1-213ENST00000574428 MAP2K6P52564 334 aa21.67■■□□□ 1.06
ATPAF1-213ENST00000574428 LTBQ06643 244 aa21.67■■□□□ 1.06
ATPAF1-213ENST00000574428 NPRL3Q12980 569 aa21.67■■□□□ 1.06
ATPAF1-213ENST00000574428 Q6ZPB1 254 aaPredicted RBP21.67■■□□□ 1.06
ATPAF1-213ENST00000574428 DHRSXQ8N5I4 330 aa21.67■■□□□ 1.06
ATPAF1-213ENST00000574428 SMPDL3BQ92485 455 aa21.67■■□□□ 1.06
ATPAF1-213ENST00000574428 SLC6A15Q9H2J7 730 aa21.67■■□□□ 1.06
ATPAF1-213ENST00000574428 ZNF71Q9NQZ8 489 aaPredicted RBP21.67■■□□□ 1.06
ATPAF1-213ENST00000574428 FAM118AQ9NWS6 357 aa21.67■■□□□ 1.06
ATPAF1-213ENST00000574428 CACNA1GO43497 2377 aa21.67■■□□□ 1.06
ATPAF1-213ENST00000574428 TRAV27A0A087WT01 109 aa21.66■■□□□ 1.06
ATPAF1-213ENST00000574428 MYBPC1Q00872 1141 aa21.66■■□□□ 1.06
ATPAF1-213ENST00000574428 C19orf57Q0VDD7 668 aa21.66■■□□□ 1.06
ATPAF1-213ENST00000574428 RASSF6Q6ZTQ3 369 aa21.66■■□□□ 1.06
ATPAF1-213ENST00000574428 OAFQ86UD1 273 aa21.66■■□□□ 1.06
ATPAF1-213ENST00000574428 FAM109AQ8N4B1 249 aa21.66■■□□□ 1.06
ATPAF1-213ENST00000574428 OR51A7Q8NH64 312 aa21.66■■□□□ 1.06
ATPAF1-213ENST00000574428 SLC25A36Q96CQ1 311 aa21.66■■□□□ 1.06
ATPAF1-213ENST00000574428 ARHGAP9Q9BRR9 750 aa21.66■■□□□ 1.06
ATPAF1-213ENST00000574428 B3GNT3Q9Y2A9 372 aa21.66■■□□□ 1.06
ATPAF1-213ENST00000574428 SLC6A5Q9Y345 797 aa21.66■■□□□ 1.06
ATPAF1-213ENST00000574428 BGLAPP02818 100 aa21.66■■□□□ 1.06
ATPAF1-213ENST00000574428 ZNF24P17028 368 aa21.66■■□□□ 1.06
ATPAF1-213ENST00000574428 CHMP24386 653 aa21.66■■□□□ 1.06
ATPAF1-213ENST00000574428 TMEM176BQ3YBM2 270 aaPredicted RBP21.66■■□□□ 1.06
ATPAF1-213ENST00000574428 GXYLT1Q4G148 440 aa21.66■■□□□ 1.06
ATPAF1-213ENST00000574428 SLC6A19Q695T7 634 aa21.66■■□□□ 1.06
ATPAF1-213ENST00000574428 C5orf46Q6UWT4 87 aa21.66■■□□□ 1.06
ATPAF1-213ENST00000574428 ZNF620Q6ZNG0 422 aa21.66■■□□□ 1.06
ATPAF1-213ENST00000574428 SLC25A43Q8WUT9 341 aaPredicted RBP21.66■■□□□ 1.06
ATPAF1-213ENST00000574428 OR5B2Q96R09 309 aa21.66■■□□□ 1.06
ATPAF1-213ENST00000574428 PLA2G12AQ9BZM1 189 aa21.66■■□□□ 1.06
ATPAF1-213ENST00000574428 GRIP2Q9C0E4 1043 aa21.66■■□□□ 1.06
ATPAF1-213ENST00000574428 NANSQ9NR45 359 aa21.66■■□□□ 1.06
ATPAF1-213ENST00000574428 FREM3P0C091 2139 aa21.65■■□□□ 1.06
ATPAF1-213ENST00000574428 ATMQ13315 3056 aa21.65■■□□□ 1.06
ATPAF1-213ENST00000574428 HTR3EA5X5Y0 456 aa21.65■■□□□ 1.06
ATPAF1-213ENST00000574428 SMNDC1O75940 238 aaKnown RBP eCLIP21.65■■□□□ 1.06
ATPAF1-213ENST00000574428 CAPGP40121 348 aa21.65■■□□□ 1.06
ATPAF1-213ENST00000574428 GFRA1P56159 465 aa21.65■■□□□ 1.06
ATPAF1-213ENST00000574428 ADARB1P78563 741 aaKnown RBP21.65■■□□□ 1.06
ATPAF1-213ENST00000574428 MYBPHQ13203 477 aa21.65■■□□□ 1.06
ATPAF1-213ENST00000574428 FAM69AQ5T7M9 428 aa21.65■■□□□ 1.06
ATPAF1-213ENST00000574428 C9orf43Q8TAL5 461 aaPredicted RBP21.65■■□□□ 1.06
ATPAF1-213ENST00000574428 FANK1Q8TC84 345 aa21.65■■□□□ 1.06
ATPAF1-213ENST00000574428 DEFB127Q9H1M4 99 aa21.65■■□□□ 1.06
ATPAF1-213ENST00000574428 QPCTLQ9NXS2 382 aa21.65■■□□□ 1.06
ATPAF1-213ENST00000574428 LUZP4Q9P127 313 aa21.65■■□□□ 1.06
ATPAF1-213ENST00000574428 IL20RAQ9UHF4 553 aa21.65■■□□□ 1.06
ATPAF1-213ENST00000574428 ENOPH1Q9UHY7 261 aa21.65■■□□□ 1.06
ATPAF1-213ENST00000574428 ZMIZ1Q9ULJ6 1067 aa21.65■■□□□ 1.06
ATPAF1-213ENST00000574428 MED12Q93074 2177 aa21.64■■□□□ 1.06
ATPAF1-213ENST00000574428 A0A1W2PNR3 127 aa21.64■■□□□ 1.06
ATPAF1-213ENST00000574428 TFECO14948 347 aaPredicted RBP21.64■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms