RNA–Protein interactions for RNA: ENST00000571249.1

CHD3-213, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-213ENST00000571249 NMUR2Q9GZQ4 415 aa5.97□□□□□ -1.45
CHD3-213ENST00000571249 C1orf21Q9H246 121 aa5.97□□□□□ -1.45
CHD3-213ENST00000571249 MMADHCQ9H3L0 296 aaPredicted RBP5.97□□□□□ -1.45
CHD3-213ENST00000571249 ARL8BQ9NVJ2 186 aa5.97□□□□□ -1.45
CHD3-213ENST00000571249 PAQR5Q9NXK6 330 aaPredicted RBP5.97□□□□□ -1.45
CHD3-213ENST00000571249 TAS2R13Q9NYV9 303 aa5.97□□□□□ -1.45
CHD3-213ENST00000571249 PPP4R1LQ9P1A2 415 aa5.97□□□□□ -1.45
CHD3-213ENST00000571249 KLHL13Q9P2N7 655 aa5.97□□□□□ -1.45
CHD3-213ENST00000571249 TESQ9UGI8 421 aaKnown RBP5.97□□□□□ -1.45
CHD3-213ENST00000571249 SLC25A15Q9Y619 301 aa5.97□□□□□ -1.45
CHD3-213ENST00000571249 C5orf63A6NC05 138 aa5.96□□□□□ -1.46
CHD3-213ENST00000571249 CCDC154A6NI56 674 aa5.96□□□□□ -1.46
CHD3-213ENST00000571249 OR6C70A6NIJ9 312 aa5.96□□□□□ -1.46
CHD3-213ENST00000571249 A8MT66 165 aa5.96□□□□□ -1.46
CHD3-213ENST00000571249 B9A039 149 aa5.96□□□□□ -1.46
CHD3-213ENST00000571249 STX16-NPEPL1H3BU86 382 aa5.96□□□□□ -1.46
CHD3-213ENST00000571249 CLDN34H7C241 214 aa5.96□□□□□ -1.46
CHD3-213ENST00000571249 SAP18O00422 153 aaKnown RBP5.96□□□□□ -1.46
CHD3-213ENST00000571249 STX16O14662 325 aa5.96□□□□□ -1.46
CHD3-213ENST00000571249 TNFSF11O14788 317 aa5.96□□□□□ -1.46
CHD3-213ENST00000571249 ACOX3O15254 700 aa5.96□□□□□ -1.46
CHD3-213ENST00000571249 SCO2O43819 266 aa5.96□□□□□ -1.46
CHD3-213ENST00000571249 KERAO60938 352 aa5.96□□□□□ -1.46
CHD3-213ENST00000571249 RAD51DO75771 328 aa5.96□□□□□ -1.46
CHD3-213ENST00000571249 ERCC1P07992 297 aaPredicted RBP5.96□□□□□ -1.46
CHD3-213ENST00000571249 FGF4P08620 206 aa5.96□□□□□ -1.46
CHD3-213ENST00000571249 KRT16P08779 473 aa5.96□□□□□ -1.46
CHD3-213ENST00000571249 PABPC4LP0CB38 370 aaKnown RBP5.96□□□□□ -1.46
CHD3-213ENST00000571249 SAGP10523 405 aaPredicted RBP5.96□□□□□ -1.46
CHD3-213ENST00000571249 SSR2P43308 183 aa5.96□□□□□ -1.46
CHD3-213ENST00000571249 GPR6P46095 362 aaPredicted RBP5.96□□□□□ -1.46
CHD3-213ENST00000571249 RGS4P49798 205 aa5.96□□□□□ -1.46
CHD3-213ENST00000571249 PPOXP50336 477 aa5.96□□□□□ -1.46
CHD3-213ENST00000571249 PGGT1BP53609 377 aa5.96□□□□□ -1.46
CHD3-213ENST00000571249 MANFP55145 182 aaKnown RBP5.96□□□□□ -1.46
CHD3-213ENST00000571249 AP1S2P56377 157 aa5.96□□□□□ -1.46
CHD3-213ENST00000571249 IL1RL1Q01638 556 aa5.96□□□□□ -1.46
CHD3-213ENST00000571249 C2orf68Q2NKX9 166 aa5.96□□□□□ -1.46
CHD3-213ENST00000571249 TCHHL1Q5QJ38 904 aaPredicted RBP5.96□□□□□ -1.46
CHD3-213ENST00000571249 SAXO2Q658L1 398 aa5.96□□□□□ -1.46
CHD3-213ENST00000571249 FDX2Q6P4F2 183 aa5.96□□□□□ -1.46
CHD3-213ENST00000571249 SLCO4C1Q6ZQN7 724 aa5.96□□□□□ -1.46
CHD3-213ENST00000571249 GPR180Q86V85 440 aa5.96□□□□□ -1.46
CHD3-213ENST00000571249 SRFBP1Q8NEF9 429 aaKnown RBP5.96□□□□□ -1.46
CHD3-213ENST00000571249 OR7G1Q8NGA0 311 aa5.96□□□□□ -1.46
CHD3-213ENST00000571249 OR4F5Q8NH21 305 aa5.96□□□□□ -1.46
CHD3-213ENST00000571249 OR2V1Q8NHB1 315 aa5.96□□□□□ -1.46
CHD3-213ENST00000571249 MUC7Q8TAX7 377 aa5.96□□□□□ -1.46
CHD3-213ENST00000571249 OSTF1Q92882 214 aa5.96□□□□□ -1.46
CHD3-213ENST00000571249 PHF21AQ96BD5 680 aa5.96□□□□□ -1.46
CHD3-213ENST00000571249 GPA33Q99795 319 aa5.96□□□□□ -1.46
CHD3-213ENST00000571249 BTBD10Q9BSF8 475 aa5.96□□□□□ -1.46
CHD3-213ENST00000571249 SORBS1Q9BX66 1292 aaKnown RBP5.96□□□□□ -1.46
CHD3-213ENST00000571249 TRIM54Q9BYV2 358 aa5.96□□□□□ -1.46
CHD3-213ENST00000571249 RACGAP1Q9H0H5 632 aa5.96□□□□□ -1.46
CHD3-213ENST00000571249 CDIP1Q9H305 208 aa5.96□□□□□ -1.46
CHD3-213ENST00000571249 GSTO2Q9H4Y5 243 aa5.96□□□□□ -1.46
CHD3-213ENST00000571249 ZNF385DQ9H6B1 395 aa5.96□□□□□ -1.46
CHD3-213ENST00000571249 NT5DC2Q9H857 520 aa5.96□□□□□ -1.46
CHD3-213ENST00000571249 MRGBPQ9NV56 204 aa5.96□□□□□ -1.46
CHD3-213ENST00000571249 MS4A12Q9NXJ0 267 aa5.96□□□□□ -1.46
CHD3-213ENST00000571249 TAS2R1Q9NYW7 299 aa5.96□□□□□ -1.46
CHD3-213ENST00000571249 MARCOQ9UEW3 520 aaPredicted RBP5.96□□□□□ -1.46
CHD3-213ENST00000571249 TRMT6Q9UJA5 497 aaKnown RBP5.96□□□□□ -1.46
CHD3-213ENST00000571249 ZNF490Q9ULM2 529 aaPredicted RBP5.96□□□□□ -1.46
CHD3-213ENST00000571249 U3KQK5 164 aa5.96□□□□□ -1.46
CHD3-213ENST00000571249 WI2-2373I1.2A0A1W2PRP0 233 aa5.95□□□□□ -1.46
CHD3-213ENST00000571249 TRPC5OSA6NMA1 111 aa5.95□□□□□ -1.46
CHD3-213ENST00000571249 J3QLI3 93 aa5.95□□□□□ -1.46
CHD3-213ENST00000571249 GSC2O15499 205 aa5.95□□□□□ -1.46
CHD3-213ENST00000571249 PLPP2O43688 288 aa5.95□□□□□ -1.46
CHD3-213ENST00000571249 SMIM24O75264 130 aa5.95□□□□□ -1.46
CHD3-213ENST00000571249 SEC14L2O76054 403 aa5.95□□□□□ -1.46
CHD3-213ENST00000571249 SCELO95171 688 aa5.95□□□□□ -1.46
CHD3-213ENST00000571249 MPZL1O95297 269 aa5.95□□□□□ -1.46
CHD3-213ENST00000571249 NGFP01138 241 aa5.95□□□□□ -1.46
CHD3-213ENST00000571249 CHRNGP07510 517 aa5.95□□□□□ -1.46
CHD3-213ENST00000571249 YES1P07947 543 aa5.95□□□□□ -1.46
CHD3-213ENST00000571249 KITP10721 976 aa5.95□□□□□ -1.46
CHD3-213ENST00000571249 GNAZP19086 355 aa5.95□□□□□ -1.46
CHD3-213ENST00000571249 S1PR1P21453 382 aa5.95□□□□□ -1.46
CHD3-213ENST00000571249 NT5EP21589 574 aa5.95□□□□□ -1.46
CHD3-213ENST00000571249 EDNRAP25101 427 aa5.95□□□□□ -1.46
CHD3-213ENST00000571249 MNAT1P51948 309 aa5.95□□□□□ -1.46
CHD3-213ENST00000571249 RAP1GDS1P52306 607 aa5.95□□□□□ -1.46
CHD3-213ENST00000571249 LMO4P61968 165 aa5.95□□□□□ -1.46
CHD3-213ENST00000571249 MYBPC1Q00872 1141 aa5.95□□□□□ -1.46
CHD3-213ENST00000571249 STX5Q13190 355 aa5.95□□□□□ -1.46
CHD3-213ENST00000571249 GANABQ14697 944 aaKnown RBP5.95□□□□□ -1.46
CHD3-213ENST00000571249 RNPS1Q15287 305 aaKnown RBP5.95□□□□□ -1.46
CHD3-213ENST00000571249 UGT3A2Q3SY77 523 aa5.95□□□□□ -1.46
CHD3-213ENST00000571249 GLYR1Q49A26 553 aaPredicted RBP5.95□□□□□ -1.46
CHD3-213ENST00000571249 SLC9B1Q4ZJI4 515 aa5.95□□□□□ -1.46
CHD3-213ENST00000571249 UNC50Q53HI1 259 aa5.95□□□□□ -1.46
CHD3-213ENST00000571249 ZNF678Q5SXM1 525 aa5.95□□□□□ -1.46
CHD3-213ENST00000571249 ZNF362Q5T0B9 420 aaPredicted RBP5.95□□□□□ -1.46
CHD3-213ENST00000571249 HBMQ6B0K9 141 aa5.95□□□□□ -1.46
CHD3-213ENST00000571249 PAQR3Q6TCH7 311 aa5.95□□□□□ -1.46
CHD3-213ENST00000571249 ADAMTSL5Q6ZMM2 481 aa5.95□□□□□ -1.46
CHD3-213ENST00000571249 C8orf86Q6ZUL3 223 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms