RNA–Protein interactions for RNA: ENST00000570253.5

PKD1-240, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 603 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-240ENST00000570253 GPIP06744 558 aa18.44■□□□□ 0.54
PKD1-240ENST00000570253 CDH2P19022 906 aaPredicted RBP18.44■□□□□ 0.54
PKD1-240ENST00000570253 CLNS1AP54105 237 aaKnown RBP18.44■□□□□ 0.54
PKD1-240ENST00000570253 FOXG1P55316 489 aaPredicted RBP18.44■□□□□ 0.54
PKD1-240ENST00000570253 TXNL4AP83876 142 aaKnown RBP18.44■□□□□ 0.54
PKD1-240ENST00000570253 H3F3AP84243 136 aa18.44■□□□□ 0.54
PKD1-240ENST00000570253 PDCD2Q16342 344 aaPredicted RBP18.44■□□□□ 0.54
PKD1-240ENST00000570253 IQCCQ4KMZ1 466 aa18.44■□□□□ 0.54
PKD1-240ENST00000570253 OTUD3Q5T2D3 398 aaPredicted RBP18.44■□□□□ 0.54
PKD1-240ENST00000570253 TSPO2Q5TGU0 170 aa18.44■□□□□ 0.54
PKD1-240ENST00000570253 SAXO2Q658L1 398 aa18.44■□□□□ 0.54
PKD1-240ENST00000570253 PAQR6Q6TCH4 344 aa18.44■□□□□ 0.54
PKD1-240ENST00000570253 AAED1Q7RTV5 226 aa18.44■□□□□ 0.54
PKD1-240ENST00000570253 SLC46A3Q7Z3Q1 461 aa18.44■□□□□ 0.54
PKD1-240ENST00000570253 ANKRD46Q86W74 232 aa18.44■□□□□ 0.54
PKD1-240ENST00000570253 KIRREL3Q8IZU9 778 aa18.44■□□□□ 0.54
PKD1-240ENST00000570253 TMEM45BQ96B21 275 aa18.44■□□□□ 0.54
PKD1-240ENST00000570253 NEURL3Q96EH8 262 aa18.44■□□□□ 0.54
PKD1-240ENST00000570253 MOKQ9UQ07 419 aa18.44■□□□□ 0.54
PKD1-240ENST00000570253 CRYAAP02489 173 aa18.43■□□□□ 0.54
PKD1-240ENST00000570253 BPGMP07738 259 aa18.43■□□□□ 0.54
PKD1-240ENST00000570253 ERCC1P07992 297 aaPredicted RBP18.43■□□□□ 0.54
PKD1-240ENST00000570253 CXCR1P25024 350 aa18.43■□□□□ 0.54
PKD1-240ENST00000570253 TACR3P29371 465 aa18.43■□□□□ 0.54
PKD1-240ENST00000570253 SLC1A3P43003 542 aa18.43■□□□□ 0.54
PKD1-240ENST00000570253 UBE2NP61088 152 aaKnown RBP18.43■□□□□ 0.54
PKD1-240ENST00000570253 SLC17A1Q14916 467 aa18.43■□□□□ 0.54
PKD1-240ENST00000570253 KRTAP24-1Q3LI83 254 aa18.43■□□□□ 0.54
PKD1-240ENST00000570253 LIPNQ5VXI9 398 aa18.43■□□□□ 0.54
PKD1-240ENST00000570253 NUDCD3Q8IVD9 361 aa18.43■□□□□ 0.54
PKD1-240ENST00000570253 WDR60Q8WVS4 1066 aa18.43■□□□□ 0.54
PKD1-240ENST00000570253 C3orf49Q96BT1 292 aa18.43■□□□□ 0.54
PKD1-240ENST00000570253 PPP1R36Q96LQ0 422 aa18.43■□□□□ 0.54
PKD1-240ENST00000570253 VRK1Q99986 396 aaPredicted RBP18.43■□□□□ 0.54
PKD1-240ENST00000570253 SLC35A5Q9BS91 424 aa18.43■□□□□ 0.54
PKD1-240ENST00000570253 C19orf24Q9BVV8 132 aa18.43■□□□□ 0.54
PKD1-240ENST00000570253 SF3B5Q9BWJ5 86 aaKnown RBP18.43■□□□□ 0.54
PKD1-240ENST00000570253 TAPBPLQ9BX59 468 aa18.43■□□□□ 0.54
PKD1-240ENST00000570253 PIF1Q9H611 641 aa18.43■□□□□ 0.54
PKD1-240ENST00000570253 MOV10Q9HCE1 1003 aaKnown RBP18.43■□□□□ 0.54
PKD1-240ENST00000570253 TMEM45AQ9NWC5 275 aa18.43■□□□□ 0.54
PKD1-240ENST00000570253 OSGIN1Q9UJX0 560 aa18.43■□□□□ 0.54
PKD1-240ENST00000570253 LOC390937A0A1W2PQ73 354 aa18.42■□□□□ 0.54
PKD1-240ENST00000570253 TMEM72A0PK05 275 aa18.42■□□□□ 0.54
PKD1-240ENST00000570253 VSTM5A8MXK1 200 aa18.42■□□□□ 0.54
PKD1-240ENST00000570253 SCN2BO60939 215 aa18.42■□□□□ 0.54
PKD1-240ENST00000570253 MYZAPP0CAP1 466 aa18.42■□□□□ 0.54
PKD1-240ENST00000570253 IL7RP16871 459 aa18.42■□□□□ 0.54
PKD1-240ENST00000570253 IGFBP5P24593 272 aa18.42■□□□□ 0.54
PKD1-240ENST00000570253 NTF4P34130 210 aa18.42■□□□□ 0.54
PKD1-240ENST00000570253 NR4A2P43354 598 aa18.42■□□□□ 0.54
PKD1-240ENST00000570253 SQLEQ14534 574 aa18.42■□□□□ 0.54
PKD1-240ENST00000570253 ZNF440Q8IYI8 595 aa18.42■□□□□ 0.54
PKD1-240ENST00000570253 TESCQ96BS2 214 aa18.42■□□□□ 0.54
PKD1-240ENST00000570253 TRNT1Q96Q11 434 aaKnown RBP18.42■□□□□ 0.54
PKD1-240ENST00000570253 CFAP73A6NFT4 308 aa18.41■□□□□ 0.54
PKD1-240ENST00000570253 OR6C65A6NJZ3 312 aa18.41■□□□□ 0.54
PKD1-240ENST00000570253 B9A039 149 aa18.41■□□□□ 0.54
PKD1-240ENST00000570253 ZNF587BE7ETH6 402 aa18.41■□□□□ 0.54
PKD1-240ENST00000570253 BCAS1O75363 584 aaPredicted RBP18.41■□□□□ 0.54
PKD1-240ENST00000570253 LY6HO94772 140 aa18.41■□□□□ 0.54
PKD1-240ENST00000570253 SNUPNO95149 360 aaKnown RBP18.41■□□□□ 0.54
PKD1-240ENST00000570253 IMPDH2P12268 514 aa18.41■□□□□ 0.54
PKD1-240ENST00000570253 GSTA3Q16772 222 aa18.41■□□□□ 0.54
PKD1-240ENST00000570253 FAM120AOSQ5T036 256 aa18.41■□□□□ 0.54
PKD1-240ENST00000570253 AP1ARQ63HQ0 302 aa18.41■□□□□ 0.54
PKD1-240ENST00000570253 TMEM225Q6GV28 225 aa18.41■□□□□ 0.54
PKD1-240ENST00000570253 HMGN2P46Q86SG4 172 aa18.41■□□□□ 0.54
PKD1-240ENST00000570253 GPAT4Q86UL3 456 aa18.41■□□□□ 0.54
PKD1-240ENST00000570253 ARIH2OSQ8N7S6 290 aa18.41■□□□□ 0.54
PKD1-240ENST00000570253 CNOT9Q92600 299 aaKnown RBP18.41■□□□□ 0.54
PKD1-240ENST00000570253 ROPN1BQ9BZX4 212 aaPredicted RBP18.41■□□□□ 0.54
PKD1-240ENST00000570253 AKTIPQ9H8T0 292 aa18.41■□□□□ 0.54
PKD1-240ENST00000570253 ROPN1Q9HAT0 212 aaPredicted RBP18.41■□□□□ 0.54
PKD1-240ENST00000570253 CACYBPQ9HB71 228 aaKnown RBP18.41■□□□□ 0.54
PKD1-240ENST00000570253 LGALS13Q9UHV8 139 aa18.41■□□□□ 0.54
PKD1-240ENST00000570253 PRDM4Q9UKN5 801 aa18.41■□□□□ 0.54
PKD1-240ENST00000570253 CLDN24A6NM45 220 aa18.4■□□□□ 0.54
PKD1-240ENST00000570253 FAAHO00519 579 aa18.4■□□□□ 0.54
PKD1-240ENST00000570253 AP3D1O14617 1153 aa18.4■□□□□ 0.54
PKD1-240ENST00000570253 S100A3P33764 101 aa18.4■□□□□ 0.54
PKD1-240ENST00000570253 SERPINF1P36955 418 aa18.4■□□□□ 0.54
PKD1-240ENST00000570253 COPZ1P61923 177 aa18.4■□□□□ 0.54
PKD1-240ENST00000570253 SLC25A3Q00325 362 aa18.4■□□□□ 0.54
PKD1-240ENST00000570253 FUT5Q11128 374 aa18.4■□□□□ 0.54
PKD1-240ENST00000570253 SWI5Q1ZZU3 235 aa18.4■□□□□ 0.54
PKD1-240ENST00000570253 LRRC74BQ6ZQY2 392 aa18.4■□□□□ 0.54
PKD1-240ENST00000570253 SPATA19Q7Z5L4 167 aa18.4■□□□□ 0.54
PKD1-240ENST00000570253 PEX5LQ8IYB4 626 aa18.4■□□□□ 0.54
PKD1-240ENST00000570253 OR9K2Q8NGE7 335 aa18.4■□□□□ 0.54
PKD1-240ENST00000570253 ZG16BQ96DA0 208 aa18.4■□□□□ 0.54
PKD1-240ENST00000570253 AURKBQ96GD4 344 aaPredicted RBP18.4■□□□□ 0.54
PKD1-240ENST00000570253 SORCS2Q96PQ0 1159 aa18.4■□□□□ 0.54
PKD1-240ENST00000570253 SLC38A2Q96QD8 506 aa18.4■□□□□ 0.54
PKD1-240ENST00000570253 KATNB1Q9BVA0 655 aa18.4■□□□□ 0.54
PKD1-240ENST00000570253 RAB1BQ9H0U4 201 aa18.4■□□□□ 0.54
PKD1-240ENST00000570253 MTHFD2LQ9H903 347 aaPredicted RBP18.4■□□□□ 0.54
PKD1-240ENST00000570253 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP18.39■□□□□ 0.531e-7■■□□□ 13.6
PKD1-240ENST00000570253 AGAP5A6NIR3 686 aa18.39■□□□□ 0.53
PKD1-240ENST00000570253 VWC2LB2RUY7 222 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms