RNA–Protein interactions for RNA: ENST00000569243.5

UBR1-209, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 702 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-209ENST00000569243 RAB7BQ96AH8 199 aa1.6□□□□□ -2.15
UBR1-209ENST00000569243 HDHD3Q9BSH5 251 aaPredicted RBP1.6□□□□□ -2.15
UBR1-209ENST00000569243 MRPL13Q9BYD1 178 aaKnown RBP1.6□□□□□ -2.15
UBR1-209ENST00000569243 ROGDIQ9GZN7 287 aa1.6□□□□□ -2.15
UBR1-209ENST00000569243 ING2Q9H160 280 aa1.6□□□□□ -2.15
UBR1-209ENST00000569243 DEFB127Q9H1M4 99 aa1.6□□□□□ -2.15
UBR1-209ENST00000569243 RHBGQ9H310 441 aa1.6□□□□□ -2.15
UBR1-209ENST00000569243 RHOJQ9H4E5 214 aa1.6□□□□□ -2.15
UBR1-209ENST00000569243 SUDS3Q9H7L9 328 aaPredicted RBP1.6□□□□□ -2.15
UBR1-209ENST00000569243 ZDHHC4Q9NPG8 344 aa1.6□□□□□ -2.15
UBR1-209ENST00000569243 SOHLH2Q9NX45 425 aa1.6□□□□□ -2.15
UBR1-209ENST00000569243 ZNF226Q9NYT6 803 aa1.6□□□□□ -2.15
UBR1-209ENST00000569243 GNPTGQ9UJJ9 305 aa1.6□□□□□ -2.15
UBR1-209ENST00000569243 TMCC3Q9ULS5 477 aa1.6□□□□□ -2.15
UBR1-209ENST00000569243 RASD1Q9Y272 281 aa1.6□□□□□ -2.15
UBR1-209ENST00000569243 TRAPPC4Q9Y296 219 aa1.6□□□□□ -2.15
UBR1-209ENST00000569243 WIF1Q9Y5W5 379 aa1.6□□□□□ -2.15
UBR1-209ENST00000569243 PLEKHH1Q9ULM0 1364 aa1.59□□□□□ -2.15
UBR1-209ENST00000569243 BRWD3Q6RI45 1802 aa1.59□□□□□ -2.15
UBR1-209ENST00000569243 IGLV11-55A0A075B6I3 123 aa1.59□□□□□ -2.15
UBR1-209ENST00000569243 IGLV2-18A0A075B6J9 118 aa1.59□□□□□ -2.15
UBR1-209ENST00000569243 IGKV1D-8A0A087WSZ0 117 aa1.59□□□□□ -2.15
UBR1-209ENST00000569243 RNF103-CHMP3A0A140T963 221 aa1.59□□□□□ -2.15
UBR1-209ENST00000569243 KIR2DS1A0A191URI9 304 aa1.59□□□□□ -2.15
UBR1-209ENST00000569243 GSAPA4D1B5 854 aa1.59□□□□□ -2.15
UBR1-209ENST00000569243 A6NIZ1 184 aa1.59□□□□□ -2.15
UBR1-209ENST00000569243 SDHDO14521 159 aa1.59□□□□□ -2.15
UBR1-209ENST00000569243 N4BP1O75113 896 aaKnown RBP1.59□□□□□ -2.15
UBR1-209ENST00000569243 RBBP9O75884 186 aa1.59□□□□□ -2.15
UBR1-209ENST00000569243 TNFSF13O75888 250 aa1.59□□□□□ -2.15
UBR1-209ENST00000569243 C6orf47O95873 294 aa1.59□□□□□ -2.15
UBR1-209ENST00000569243 TGFAP01135 160 aa1.59□□□□□ -2.15
UBR1-209ENST00000569243 FUT1P19526 365 aa1.59□□□□□ -2.15
UBR1-209ENST00000569243 CMA1P23946 247 aa1.59□□□□□ -2.15
UBR1-209ENST00000569243 FGF9P31371 208 aaPredicted RBP1.59□□□□□ -2.15
UBR1-209ENST00000569243 SHMT2P34897 504 aa1.59□□□□□ -2.15
UBR1-209ENST00000569243 ATP6V1E1P36543 226 aa1.59□□□□□ -2.15
UBR1-209ENST00000569243 TDO2P48775 406 aa1.59□□□□□ -2.15
UBR1-209ENST00000569243 DAP3P51398 398 aaKnown RBP1.59□□□□□ -2.15
UBR1-209ENST00000569243 AP3M2P53677 418 aa1.59□□□□□ -2.15
UBR1-209ENST00000569243 RAP1BP61224 184 aa1.59□□□□□ -2.15
UBR1-209ENST00000569243 CUL1Q13616 776 aa1.59□□□□□ -2.15
UBR1-209ENST00000569243 KIR2DS1Q14954 304 aa1.59□□□□□ -2.15
UBR1-209ENST00000569243 SF3A2Q15428 464 aaKnown RBP1.59□□□□□ -2.15
UBR1-209ENST00000569243 TRIP10Q15642 601 aa1.59□□□□□ -2.15
UBR1-209ENST00000569243 KRTAP13-2Q52LG2 175 aa1.59□□□□□ -2.15
UBR1-209ENST00000569243 LDLRAP1Q5SW96 308 aa1.59□□□□□ -2.15
UBR1-209ENST00000569243 GPRC6AQ5T6X5 926 aa1.59□□□□□ -2.15
UBR1-209ENST00000569243 ZSCAN25Q6NSZ9 544 aa1.59□□□□□ -2.15
UBR1-209ENST00000569243 PLBD1Q6P4A8 553 aa1.59□□□□□ -2.15
UBR1-209ENST00000569243 CBLN3Q6UW01 205 aa1.59□□□□□ -2.15
UBR1-209ENST00000569243 ZNF836Q6ZNA1 936 aa1.59□□□□□ -2.15
UBR1-209ENST00000569243 CATSPER4Q7RTX7 472 aa1.59□□□□□ -2.15
UBR1-209ENST00000569243 LRP11Q86VZ4 500 aa1.59□□□□□ -2.15
UBR1-209ENST00000569243 MFSD6LQ8IWD5 586 aa1.59□□□□□ -2.15
UBR1-209ENST00000569243 FTMTQ8N4E7 242 aa1.59□□□□□ -2.15
UBR1-209ENST00000569243 OR51G2Q8NGK0 314 aa1.59□□□□□ -2.15
UBR1-209ENST00000569243 MCOLN3Q8TDD5 553 aa1.59□□□□□ -2.15
UBR1-209ENST00000569243 ARPC1AQ92747 370 aa1.59□□□□□ -2.15
UBR1-209ENST00000569243 FRZBQ92765 325 aa1.59□□□□□ -2.15
UBR1-209ENST00000569243 ASB9Q96DX5 294 aa1.59□□□□□ -2.15
UBR1-209ENST00000569243 OSBPL11Q9BXB4 747 aa1.59□□□□□ -2.15
UBR1-209ENST00000569243 DBNDD1Q9H9R9 158 aa1.59□□□□□ -2.15
UBR1-209ENST00000569243 FOLH1BQ9HBA9 442 aa1.59□□□□□ -2.15
UBR1-209ENST00000569243 MARCOQ9UEW3 520 aaPredicted RBP1.59□□□□□ -2.15
UBR1-209ENST00000569243 ZNF835Q9Y2P0 537 aa1.59□□□□□ -2.15
UBR1-209ENST00000569243 GSTK1Q9Y2Q3 226 aa1.59□□□□□ -2.15
UBR1-209ENST00000569243 YTHDF2Q9Y5A9 579 aaKnown RBP1.59□□□□□ -2.15
UBR1-209ENST00000569243 ALG6Q9Y672 507 aa1.59□□□□□ -2.15
UBR1-209ENST00000569243 CLSPNQ9HAW4 1339 aa1.59□□□□□ -2.16
UBR1-209ENST00000569243 PHF3Q92576 2039 aaKnown RBP1.58□□□□□ -2.16
UBR1-209ENST00000569243 NPIPA7E9PJI5 369 aa1.58□□□□□ -2.16
UBR1-209ENST00000569243 ANGPTL7O43827 346 aa1.58□□□□□ -2.16
UBR1-209ENST00000569243 CXCL13O43927 109 aa1.58□□□□□ -2.16
UBR1-209ENST00000569243 CA1P00915 261 aaPredicted RBP1.58□□□□□ -2.16
UBR1-209ENST00000569243 IGHG4P01861 327 aa1.58□□□□□ -2.16
UBR1-209ENST00000569243 TSPY4P0CV99 314 aa1.58□□□□□ -2.16
UBR1-209ENST00000569243 TSPY10P0CW01 314 aa1.58□□□□□ -2.16
UBR1-209ENST00000569243 RBMY1CP0DJD4 496 aa1.58□□□□□ -2.16
UBR1-209ENST00000569243 NPIPA8P0DM63 369 aa1.58□□□□□ -2.16
UBR1-209ENST00000569243 CELP19835 753 aa1.58□□□□□ -2.16
UBR1-209ENST00000569243 CCND2P30279 289 aa1.58□□□□□ -2.16
UBR1-209ENST00000569243 ACADVLP49748 655 aa1.58□□□□□ -2.16
UBR1-209ENST00000569243 EFNB2P52799 333 aa1.58□□□□□ -2.16
UBR1-209ENST00000569243 ACTA2P62736 377 aa1.58□□□□□ -2.16
UBR1-209ENST00000569243 ACTC1P68032 377 aa1.58□□□□□ -2.16
UBR1-209ENST00000569243 LRRC10Q5BKY1 277 aa1.58□□□□□ -2.16
UBR1-209ENST00000569243 LY6G6FQ5SQ64 297 aa1.58□□□□□ -2.16
UBR1-209ENST00000569243 C12orf60Q5U649 245 aa1.58□□□□□ -2.16
UBR1-209ENST00000569243 Q5W150 140 aa1.58□□□□□ -2.16
UBR1-209ENST00000569243 TIGD3Q6B0B8 471 aa1.58□□□□□ -2.16
UBR1-209ENST00000569243 RAET1GQ6H3X3 334 aa1.58□□□□□ -2.16
UBR1-209ENST00000569243 FAM71F2Q6NXP2 309 aa1.58□□□□□ -2.16
UBR1-209ENST00000569243 CASC1Q6TDU7 716 aa1.58□□□□□ -2.16
UBR1-209ENST00000569243 C19orf35Q6ZS72 473 aa1.58□□□□□ -2.16
UBR1-209ENST00000569243 DPY19L4Q7Z388 723 aa1.58□□□□□ -2.16
UBR1-209ENST00000569243 HDDC3Q8N4P3 179 aa1.58□□□□□ -2.16
UBR1-209ENST00000569243 Q8N976 141 aa1.58□□□□□ -2.16
UBR1-209ENST00000569243 HTR3CQ8WXA8 447 aa1.58□□□□□ -2.16
UBR1-209ENST00000569243 MRPL38Q96DV4 380 aaKnown RBP1.58□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms