RNA–Protein interactions for RNA: ENST00000568676.5

HERPUD1-215, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, human

TSL 2

Gene HERPUD1, Length 571 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HERPUD1-215	ENST00000568676	OR8J2	Q8NGG1	315 aa		13.74	□□□□□ -0.21
HERPUD1-215	ENST00000568676	XAGE5	Q8WWM1	108 aa		13.74	□□□□□ -0.21
HERPUD1-215	ENST00000568676	C3orf49	Q96BT1	292 aa		13.74	□□□□□ -0.21
HERPUD1-215	ENST00000568676	ROPN1L	Q96C74	230 aa		13.74	□□□□□ -0.21
HERPUD1-215	ENST00000568676	TUBGCP3	Q96CW5	907 aa		13.74	□□□□□ -0.21
HERPUD1-215	ENST00000568676	TRIM44	Q96DX7	344 aa	Predicted RBP	13.74	□□□□□ -0.21
HERPUD1-215	ENST00000568676	FOXN4	Q96NZ1	517 aa		13.74	□□□□□ -0.21
HERPUD1-215	ENST00000568676	SLC38A2	Q96QD8	506 aa		13.74	□□□□□ -0.21
HERPUD1-215	ENST00000568676	VRK1	Q99986	396 aa	Predicted RBP	13.74	□□□□□ -0.21
HERPUD1-215	ENST00000568676	OR11A1	Q9GZK7	315 aa		13.74	□□□□□ -0.21
HERPUD1-215	ENST00000568676	RAB1B	Q9H0U4	201 aa		13.74	□□□□□ -0.21
HERPUD1-215	ENST00000568676	TMEM45A	Q9NWC5	275 aa		13.74	□□□□□ -0.21
HERPUD1-215	ENST00000568676	NOP53	Q9NZM5	478 aa	Known RBP	13.74	□□□□□ -0.21
HERPUD1-215	ENST00000568676	GIMAP2	Q9UG22	337 aa		13.74	□□□□□ -0.21
HERPUD1-215	ENST00000568676	TMED7-TICAM2	A0A0A6YYA0	188 aa		13.73	□□□□□ -0.21
HERPUD1-215	ENST00000568676	G6PD	P11413	515 aa		13.73	□□□□□ -0.21
HERPUD1-215	ENST00000568676	UQCRC2	P22695	453 aa		13.73	□□□□□ -0.21
HERPUD1-215	ENST00000568676	GIF	P27352	417 aa		13.73	□□□□□ -0.21
HERPUD1-215	ENST00000568676	ALDH3A1	P30838	453 aa		13.73	□□□□□ -0.21
HERPUD1-215	ENST00000568676	IDH2	P48735	452 aa	Known RBP	13.73	□□□□□ -0.21
HERPUD1-215	ENST00000568676	CHN2	P52757	468 aa		13.73	□□□□□ -0.21
HERPUD1-215	ENST00000568676	TXNL4A	P83876	142 aa	Known RBP	13.73	□□□□□ -0.21
HERPUD1-215	ENST00000568676	EMX2	Q04743	252 aa		13.73	□□□□□ -0.21
HERPUD1-215	ENST00000568676	GNA13	Q14344	377 aa		13.73	□□□□□ -0.21
HERPUD1-215	ENST00000568676	CARTPT	Q16568	116 aa		13.73	□□□□□ -0.21
HERPUD1-215	ENST00000568676	ANXA8L1	Q5VT79	327 aa		13.73	□□□□□ -0.21
HERPUD1-215	ENST00000568676	FRRS1	Q6ZNA5	592 aa		13.73	□□□□□ -0.21
HERPUD1-215	ENST00000568676	FAM169B	Q8N8A8	192 aa		13.73	□□□□□ -0.21
HERPUD1-215	ENST00000568676	OR4F15	Q8NGB8	312 aa		13.73	□□□□□ -0.21
HERPUD1-215	ENST00000568676	OR4A15	Q8NGL6	344 aa		13.73	□□□□□ -0.21
HERPUD1-215	ENST00000568676	APOPT1	Q96IL0	206 aa		13.73	□□□□□ -0.21
HERPUD1-215	ENST00000568676	C3orf30	Q96M34	536 aa		13.73	□□□□□ -0.21
HERPUD1-215	ENST00000568676	BPESC1	Q9GZL8	116 aa		13.73	□□□□□ -0.21
HERPUD1-215	ENST00000568676	PLK3	Q9H4B4	646 aa		13.73	□□□□□ -0.21
HERPUD1-215	ENST00000568676	TMED7	Q9Y3B3	224 aa		13.73	□□□□□ -0.21
HERPUD1-215	ENST00000568676	PCDHB14	Q9Y5E9	798 aa		13.73	□□□□□ -0.21
HERPUD1-215	ENST00000568676	MALRD1	Q5VYJ5	2156 aa		13.73	□□□□□ -0.21
HERPUD1-215	ENST00000568676	HEATR1	Q9H583	2144 aa	Known RBP	13.72	□□□□□ -0.21
HERPUD1-215	ENST00000568676	PRSS51	A0A1B0GVH4	220 aa		13.72	□□□□□ -0.21
HERPUD1-215	ENST00000568676	SNUPN	O95149	360 aa	Known RBP	13.72	□□□□□ -0.21
HERPUD1-215	ENST00000568676	VAMP5	O95183	116 aa		13.72	□□□□□ -0.21
HERPUD1-215	ENST00000568676	SHBG	P04278	402 aa		13.72	□□□□□ -0.21
HERPUD1-215	ENST00000568676	GPI	P06744	558 aa		13.72	□□□□□ -0.21
HERPUD1-215	ENST00000568676	TACSTD2	P09758	323 aa		13.72	□□□□□ -0.21
HERPUD1-215	ENST00000568676	OR12D1	P0DN82	309 aa		13.72	□□□□□ -0.21
HERPUD1-215	ENST00000568676	IMPDH2	P12268	514 aa		13.72	□□□□□ -0.21
HERPUD1-215	ENST00000568676	HOXB1	P14653	301 aa	Predicted RBP	13.72	□□□□□ -0.21
HERPUD1-215	ENST00000568676	SLC1A3	P43003	542 aa		13.72	□□□□□ -0.21
HERPUD1-215	ENST00000568676	KHK	P50053	298 aa		13.72	□□□□□ -0.21
HERPUD1-215	ENST00000568676	IDH3G	P51553	393 aa	Predicted RBP	13.72	□□□□□ -0.21
HERPUD1-215	ENST00000568676	GSTA3	Q16772	222 aa		13.72	□□□□□ -0.21
HERPUD1-215	ENST00000568676	OTUD3	Q5T2D3	398 aa	Predicted RBP	13.72	□□□□□ -0.21
HERPUD1-215	ENST00000568676	OR4F3	Q6IEY1	312 aa		13.72	□□□□□ -0.21
HERPUD1-215	ENST00000568676	AAED1	Q7RTV5	226 aa		13.72	□□□□□ -0.21
HERPUD1-215	ENST00000568676	MEX3D	Q86XN8	651 aa	Known RBP	13.72	□□□□□ -0.21
HERPUD1-215	ENST00000568676	CLECL1	Q8IZS7	167 aa		13.72	□□□□□ -0.21
HERPUD1-215	ENST00000568676	AGR3	Q8TD06	166 aa		13.72	□□□□□ -0.21
HERPUD1-215	ENST00000568676	MAGEE2	Q8TD90	523 aa	Predicted RBP	13.72	□□□□□ -0.21
HERPUD1-215	ENST00000568676	UBLCP1	Q8WVY7	318 aa	Predicted RBP	13.72	□□□□□ -0.21
HERPUD1-215	ENST00000568676	NEU4	Q8WWR8	484 aa	Predicted RBP	13.72	□□□□□ -0.21
HERPUD1-215	ENST00000568676	CRNN	Q9UBG3	495 aa	Predicted RBP	13.72	□□□□□ -0.21
HERPUD1-215	ENST00000568676	OSGIN1	Q9UJX0	560 aa		13.72	□□□□□ -0.21
HERPUD1-215	ENST00000568676	ARFGEF3	Q5TH69	2177 aa		13.71	□□□□□ -0.21
HERPUD1-215	ENST00000568676	ARPC4-TTLL3	A0A0A6YYG9	625 aa		13.71	□□□□□ -0.21
HERPUD1-215	ENST00000568676		A0A0A6YYJ9	748 aa		13.71	□□□□□ -0.21
HERPUD1-215	ENST00000568676	IGHV1-18	A0A0C4DH31	117 aa		13.71	□□□□□ -0.21
HERPUD1-215	ENST00000568676	SMIM23	A6NLE4	172 aa		13.71	□□□□□ -0.21
HERPUD1-215	ENST00000568676	ZNF587B	E7ETH6	402 aa		13.71	□□□□□ -0.21
HERPUD1-215	ENST00000568676	SLCO1B7	G3V0H7	640 aa		13.71	□□□□□ -0.21
HERPUD1-215	ENST00000568676	SKAP2	O75563	359 aa	Predicted RBP	13.71	□□□□□ -0.21
HERPUD1-215	ENST00000568676	KRT33A	O76009	404 aa		13.71	□□□□□ -0.21
HERPUD1-215	ENST00000568676	OR4A8	P0C604	315 aa		13.71	□□□□□ -0.21
HERPUD1-215	ENST00000568676	CCNA2	P20248	432 aa		13.71	□□□□□ -0.21
HERPUD1-215	ENST00000568676	TACR3	P29371	465 aa		13.71	□□□□□ -0.21
HERPUD1-215	ENST00000568676	ANXA11	P50995	505 aa	Known RBP	13.71	□□□□□ -0.21
HERPUD1-215	ENST00000568676	UBE2N	P61088	152 aa	Known RBP	13.71	□□□□□ -0.21
HERPUD1-215	ENST00000568676	ADIPOQ	Q15848	244 aa		13.71	□□□□□ -0.21
HERPUD1-215	ENST00000568676	DPY19L1	Q2PZI1	675 aa		13.71	□□□□□ -0.21
HERPUD1-215	ENST00000568676	TBRG1	Q3YBR2	411 aa		13.71	□□□□□ -0.21
HERPUD1-215	ENST00000568676	SAXO2	Q658L1	398 aa		13.71	□□□□□ -0.21
HERPUD1-215	ENST00000568676	NUP37	Q8NFH4	326 aa		13.71	□□□□□ -0.21
HERPUD1-215	ENST00000568676	OR9K2	Q8NGE7	335 aa		13.71	□□□□□ -0.21
HERPUD1-215	ENST00000568676	NEURL3	Q96EH8	262 aa		13.71	□□□□□ -0.21
HERPUD1-215	ENST00000568676	ZNF442	Q9H7R0	627 aa		13.71	□□□□□ -0.21
HERPUD1-215	ENST00000568676	TMEFF2	Q9UIK5	374 aa	Predicted RBP	13.71	□□□□□ -0.21
HERPUD1-215	ENST00000568676	NUP214	P35658	2090 aa	Predicted RBP	13.7	□□□□□ -0.22
HERPUD1-215	ENST00000568676	TMEM72	A0PK05	275 aa		13.7	□□□□□ -0.22
HERPUD1-215	ENST00000568676	AQP7P3	A6NL99	342 aa		13.7	□□□□□ -0.22
HERPUD1-215	ENST00000568676	BCAS1	O75363	584 aa	Predicted RBP	13.7	□□□□□ -0.22
HERPUD1-215	ENST00000568676	STAMBP	O95630	424 aa		13.7	□□□□□ -0.22
HERPUD1-215	ENST00000568676	NUDT17	P0C025	328 aa		13.7	□□□□□ -0.22
HERPUD1-215	ENST00000568676	SRP14	P37108	136 aa	Known RBP	13.7	□□□□□ -0.22
HERPUD1-215	ENST00000568676	SH3BGR	P55822	239 aa	Predicted RBP	13.7	□□□□□ -0.22
HERPUD1-215	ENST00000568676	SRSF2	Q01130	221 aa	Known RBP	13.7	□□□□□ -0.22
HERPUD1-215	ENST00000568676	NAAA	Q02083	359 aa		13.7	□□□□□ -0.22
HERPUD1-215	ENST00000568676	FUT5	Q11128	374 aa		13.7	□□□□□ -0.22
HERPUD1-215	ENST00000568676	SCGB2A2	Q13296	93 aa		13.7	□□□□□ -0.22
HERPUD1-215	ENST00000568676	ZSWIM7	Q19AV6	140 aa		13.7	□□□□□ -0.22
HERPUD1-215	ENST00000568676	GPAT3	Q53EU6	434 aa		13.7	□□□□□ -0.22
HERPUD1-215	ENST00000568676	HIKESHI	Q53FT3	197 aa		13.7	□□□□□ -0.22

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