RNA–Protein interactions for RNA: ENST00000567817.5

CAPN3-217, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-217ENST00000567817 CYP4F2P78329 520 aa4.86□□□□□ -1.63
CAPN3-217ENST00000567817 HOXA4Q00056 320 aaPredicted RBP4.86□□□□□ -1.63
CAPN3-217ENST00000567817 MC1RQ01726 317 aa4.86□□□□□ -1.63
CAPN3-217ENST00000567817 BNC1Q01954 994 aa4.86□□□□□ -1.63
CAPN3-217ENST00000567817 RGS1Q08116 209 aa4.86□□□□□ -1.63
CAPN3-217ENST00000567817 RIPPLY1Q0D2K3 151 aa4.86□□□□□ -1.63
CAPN3-217ENST00000567817 HSPB3Q12988 150 aa4.86□□□□□ -1.63
CAPN3-217ENST00000567817 CBX3Q13185 183 aa4.86□□□□□ -1.63
CAPN3-217ENST00000567817 SGCGQ13326 291 aa4.86□□□□□ -1.63
CAPN3-217ENST00000567817 KRT33BQ14525 404 aa4.86□□□□□ -1.63
CAPN3-217ENST00000567817 TRAM2Q15035 370 aa4.86□□□□□ -1.63
CAPN3-217ENST00000567817 CST6Q15828 149 aa4.86□□□□□ -1.63
CAPN3-217ENST00000567817 ZIC1Q15915 447 aa4.86□□□□□ -1.63
CAPN3-217ENST00000567817 DUSP7Q16829 419 aa4.86□□□□□ -1.63
CAPN3-217ENST00000567817 SYT16Q17RD7 645 aa4.86□□□□□ -1.63
CAPN3-217ENST00000567817 ZSWIM7Q19AV6 140 aa4.86□□□□□ -1.63
CAPN3-217ENST00000567817 POM121L1PQ3SYA9 428 aa4.86□□□□□ -1.63
CAPN3-217ENST00000567817 EIPR1Q53HC9 387 aa4.86□□□□□ -1.63
CAPN3-217ENST00000567817 ENTPD8Q5MY95 495 aa4.86□□□□□ -1.63
CAPN3-217ENST00000567817 ARMC4Q5T2S8 1044 aa4.86□□□□□ -1.63
CAPN3-217ENST00000567817 NDUFAF5Q5TEU4 345 aa4.86□□□□□ -1.63
CAPN3-217ENST00000567817 ZNF776Q68DI1 518 aaPredicted RBP4.86□□□□□ -1.63
CAPN3-217ENST00000567817 RPL13AP3Q6NVV1 102 aa4.86□□□□□ -1.63
CAPN3-217ENST00000567817 SLC27A4Q6P1M0 643 aa4.86□□□□□ -1.63
CAPN3-217ENST00000567817 PGBD2Q6P3X8 592 aa4.86□□□□□ -1.63
CAPN3-217ENST00000567817 TNFAIP8L2Q6P589 184 aaPredicted RBP4.86□□□□□ -1.63
CAPN3-217ENST00000567817 WASH2PQ6VEQ5 465 aa4.86□□□□□ -1.63
CAPN3-217ENST00000567817 HSDL2Q6YN16 418 aa4.86□□□□□ -1.63
CAPN3-217ENST00000567817 ZNF782Q6ZMW2 699 aaPredicted RBP4.86□□□□□ -1.63
CAPN3-217ENST00000567817 RRM2BQ7LG56 351 aa4.86□□□□□ -1.63
CAPN3-217ENST00000567817 ADCK2Q7Z695 626 aa4.86□□□□□ -1.63
CAPN3-217ENST00000567817 GALNT10Q86SR1 603 aa4.86□□□□□ -1.63
CAPN3-217ENST00000567817 TRIM74Q86UV6 250 aa4.86□□□□□ -1.63
CAPN3-217ENST00000567817 HORMAD2Q8N7B1 307 aa4.86□□□□□ -1.63
CAPN3-217ENST00000567817 MFSD9Q8NBP5 474 aa4.86□□□□□ -1.63
CAPN3-217ENST00000567817 CADM4Q8NFZ8 388 aa4.86□□□□□ -1.63
CAPN3-217ENST00000567817 OR2L5Q8NG80 312 aa4.86□□□□□ -1.63
CAPN3-217ENST00000567817 OR5AK3PQ8NH89 298 aa4.86□□□□□ -1.63
CAPN3-217ENST00000567817 TEX47Q8TBZ9 253 aa4.86□□□□□ -1.63
CAPN3-217ENST00000567817 GNPDA2Q8TDQ7 276 aa4.86□□□□□ -1.63
CAPN3-217ENST00000567817 CREB3L4Q8TEY5 395 aa4.86□□□□□ -1.63
CAPN3-217ENST00000567817 ZFPM2Q8WW38 1151 aa4.86□□□□□ -1.63
CAPN3-217ENST00000567817 DNASE2BQ8WZ79 361 aa4.86□□□□□ -1.63
CAPN3-217ENST00000567817 OSTF1Q92882 214 aa4.86□□□□□ -1.63
CAPN3-217ENST00000567817 FAM131CQ96AQ9 280 aa4.86□□□□□ -1.63
CAPN3-217ENST00000567817 EXOSC8Q96B26 276 aaKnown RBP4.86□□□□□ -1.63
CAPN3-217ENST00000567817 AMDHD1Q96NU7 426 aa4.86□□□□□ -1.63
CAPN3-217ENST00000567817 F2RL3Q96RI0 385 aa4.86□□□□□ -1.63
CAPN3-217ENST00000567817 BBS4Q96RK4 519 aa4.86□□□□□ -1.63
CAPN3-217ENST00000567817 NEURL2Q9BR09 285 aa4.86□□□□□ -1.63
CAPN3-217ENST00000567817 SLC30A2Q9BRI3 323 aa4.86□□□□□ -1.63
CAPN3-217ENST00000567817 CHCHD6Q9BRQ6 235 aa4.86□□□□□ -1.63
CAPN3-217ENST00000567817 FUZQ9BT04 418 aa4.86□□□□□ -1.63
CAPN3-217ENST00000567817 MED18Q9BUE0 208 aa4.86□□□□□ -1.63
CAPN3-217ENST00000567817 ARMC7Q9H6L4 198 aa4.86□□□□□ -1.63
CAPN3-217ENST00000567817 MRPS30Q9NP92 439 aaKnown RBP4.86□□□□□ -1.63
CAPN3-217ENST00000567817 FGF20Q9NP95 211 aaPredicted RBP4.86□□□□□ -1.63
CAPN3-217ENST00000567817 PRSS16Q9NQE7 514 aa4.86□□□□□ -1.63
CAPN3-217ENST00000567817 SIRT3Q9NTG7 399 aaPredicted RBP4.86□□□□□ -1.63
CAPN3-217ENST00000567817 NDUFB11Q9NX14 153 aa4.86□□□□□ -1.63
CAPN3-217ENST00000567817 PHF11Q9UIL8 331 aa4.86□□□□□ -1.63
CAPN3-217ENST00000567817 ZNF229Q9UJW7 825 aa4.86□□□□□ -1.63
CAPN3-217ENST00000567817 SSR3Q9UNL2 185 aa4.86□□□□□ -1.63
CAPN3-217ENST00000567817 GSTK1Q9Y2Q3 226 aa4.86□□□□□ -1.63
CAPN3-217ENST00000567817 EXOSC1Q9Y3B2 195 aaKnown RBP4.86□□□□□ -1.63
CAPN3-217ENST00000567817 TNFRSF18Q9Y5U5 241 aa4.86□□□□□ -1.63
CAPN3-217ENST00000567817 ZNF780BQ9Y6R6 833 aa4.86□□□□□ -1.63
CAPN3-217ENST00000567817 SPACA6W5XKT8 324 aa4.86□□□□□ -1.63
CAPN3-217ENST00000567817 COL5A1P20908 1838 aaPredicted RBP4.86□□□□□ -1.63
CAPN3-217ENST00000567817 ATMQ13315 3056 aa4.86□□□□□ -1.63
CAPN3-217ENST00000567817 TBC1D3KA0A087X1G2 549 aa4.85□□□□□ -1.63
CAPN3-217ENST00000567817 TRBV4-1A0A0J9YWV2 114 aa4.85□□□□□ -1.63
CAPN3-217ENST00000567817 LOC100506127A0A0U1RQW1 187 aa4.85□□□□□ -1.63
CAPN3-217ENST00000567817 A0A1W2PPV9 198 aa4.85□□□□□ -1.63
CAPN3-217ENST00000567817 TCRBV21S2A2A0A5A6 115 aa4.85□□□□□ -1.63
CAPN3-217ENST00000567817 TBC1D3FA6NER0 549 aaPredicted RBP4.85□□□□□ -1.63
CAPN3-217ENST00000567817 ZNF670-ZNF695F2Z2N8 137 aa4.85□□□□□ -1.63
CAPN3-217ENST00000567817 J3KTA2 159 aa4.85□□□□□ -1.63
CAPN3-217ENST00000567817 K7EQS6 105 aa4.85□□□□□ -1.63
CAPN3-217ENST00000567817 M0R3H8 397 aa4.85□□□□□ -1.63
CAPN3-217ENST00000567817 PSMD9O00233 223 aa4.85□□□□□ -1.63
CAPN3-217ENST00000567817 AP3D1O14617 1153 aa4.85□□□□□ -1.63
CAPN3-217ENST00000567817 FFAR1O14842 300 aa4.85□□□□□ -1.63
CAPN3-217ENST00000567817 EMC8O43402 210 aa4.85□□□□□ -1.63
CAPN3-217ENST00000567817 TLX3O43711 291 aaPredicted RBP4.85□□□□□ -1.63
CAPN3-217ENST00000567817 TMPRSS11DO60235 418 aa4.85□□□□□ -1.63
CAPN3-217ENST00000567817 KIAA0513O60268 411 aa4.85□□□□□ -1.63
CAPN3-217ENST00000567817 ENTPD6O75354 484 aa4.85□□□□□ -1.63
CAPN3-217ENST00000567817 SH3BGRLO75368 114 aa4.85□□□□□ -1.63
CAPN3-217ENST00000567817 OR5F1O95221 314 aa4.85□□□□□ -1.63
CAPN3-217ENST00000567817 TBX6O95947 436 aaPredicted RBP4.85□□□□□ -1.63
CAPN3-217ENST00000567817 GBAP04062 536 aa4.85□□□□□ -1.63
CAPN3-217ENST00000567817 ALPPP05187 535 aa4.85□□□□□ -1.63
CAPN3-217ENST00000567817 CELA2AP08217 269 aa4.85□□□□□ -1.63
CAPN3-217ENST00000567817 GUSBP08236 651 aa4.85□□□□□ -1.63
CAPN3-217ENST00000567817 SLC35G6P0C7Q6 338 aa4.85□□□□□ -1.63
CAPN3-217ENST00000567817 HSMCR30P0CW71 290 aa4.85□□□□□ -1.63
CAPN3-217ENST00000567817 ACP2P11117 423 aa4.85□□□□□ -1.63
CAPN3-217ENST00000567817 DBTP11182 482 aaKnown RBP4.85□□□□□ -1.63
CAPN3-217ENST00000567817 CD53P19397 219 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms