RNA–Protein interactions for RNA: ENST00000567549.2

LINC01238-205, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

BASIC

Gene LINC01238, Length 1,107 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-205ENST00000567549 CRISP3P54108 245 aa16.39■□□□□ 0.21
LINC01238-205ENST00000567549 LARS2Q15031 903 aaKnown RBP16.39■□□□□ 0.21
LINC01238-205ENST00000567549 RAB35Q15286 201 aa16.39■□□□□ 0.21
LINC01238-205ENST00000567549 LIN52Q52LA3 116 aa16.39■□□□□ 0.21
LINC01238-205ENST00000567549 MUC15Q8N387 334 aa16.39■□□□□ 0.21
LINC01238-205ENST00000567549 POMGNT2Q8NAT1 580 aa16.39■□□□□ 0.21
LINC01238-205ENST00000567549 NEUROG1Q92886 237 aa16.39■□□□□ 0.21
LINC01238-205ENST00000567549 MUS81Q96NY9 551 aa16.39■□□□□ 0.21
LINC01238-205ENST00000567549 OBP2BQ9NPH6 170 aa16.39■□□□□ 0.21
LINC01238-205ENST00000567549 THAP1Q9NVV9 213 aa16.39■□□□□ 0.21
LINC01238-205ENST00000567549 ZNF232Q9UNY5 417 aa16.39■□□□□ 0.21
LINC01238-205ENST00000567549 SLC25A15Q9Y619 301 aa16.39■□□□□ 0.21
LINC01238-205ENST00000567549 PMF1-BGLAPU3KQ54 211 aa16.39■□□□□ 0.21
LINC01238-205ENST00000567549 M0R1B8 84 aa16.38■□□□□ 0.21
LINC01238-205ENST00000567549 HDAC3O15379 428 aa16.38■□□□□ 0.21
LINC01238-205ENST00000567549 CD5LO43866 347 aa16.38■□□□□ 0.21
LINC01238-205ENST00000567549 RAMP1O60894 148 aa16.38■□□□□ 0.21
LINC01238-205ENST00000567549 SHOX2O60902 331 aaPredicted RBP16.38■□□□□ 0.21
LINC01238-205ENST00000567549 KRT33AO76009 404 aa16.38■□□□□ 0.21
LINC01238-205ENST00000567549 VAMP5O95183 116 aa16.38■□□□□ 0.21
LINC01238-205ENST00000567549 IGHV3-9P01782 118 aa16.38■□□□□ 0.21
LINC01238-205ENST00000567549 IGHV4-39P01824 125 aa16.38■□□□□ 0.21
LINC01238-205ENST00000567549 CD40P25942 277 aa16.38■□□□□ 0.21
LINC01238-205ENST00000567549 TACR3P29371 465 aa16.38■□□□□ 0.21
LINC01238-205ENST00000567549 FABP6P51161 128 aa16.38■□□□□ 0.21
LINC01238-205ENST00000567549 ZNF83P51522 516 aa16.38■□□□□ 0.21
LINC01238-205ENST00000567549 PRPS1P60891 318 aa16.38■□□□□ 0.21
LINC01238-205ENST00000567549 H3F3AP84243 136 aa16.38■□□□□ 0.21
LINC01238-205ENST00000567549 FUT5Q11128 374 aa16.38■□□□□ 0.21
LINC01238-205ENST00000567549 PODNL1Q6PEZ8 512 aa16.38■□□□□ 0.21
LINC01238-205ENST00000567549 ZC3HAV1Q7Z2W4 902 aaKnown RBP16.38■□□□□ 0.21
LINC01238-205ENST00000567549 PRIMA1Q86XR5 153 aa16.38■□□□□ 0.21
LINC01238-205ENST00000567549 ZNF524Q96C55 264 aa16.38■□□□□ 0.21
LINC01238-205ENST00000567549 KCNS3Q9BQ31 491 aa16.38■□□□□ 0.21
LINC01238-205ENST00000567549 INPP5KQ9BT40 448 aa16.38■□□□□ 0.21
LINC01238-205ENST00000567549 OR11A1Q9GZK7 315 aa16.38■□□□□ 0.21
LINC01238-205ENST00000567549 SLC38A1Q9H2H9 487 aa16.38■□□□□ 0.21
LINC01238-205ENST00000567549 INTS9Q9NV88 658 aaKnown RBP16.38■□□□□ 0.21
LINC01238-205ENST00000567549 OSGIN1Q9UJX0 560 aa16.38■□□□□ 0.21
LINC01238-205ENST00000567549 FLVCR1Q9Y5Y0 555 aa16.38■□□□□ 0.21
LINC01238-205ENST00000567549 TMEM120BA0PK00 339 aa16.37■□□□□ 0.21
LINC01238-205ENST00000567549 SSX4O60224 188 aa16.37■□□□□ 0.21
LINC01238-205ENST00000567549 THBS1P07996 1170 aa16.37■□□□□ 0.21
LINC01238-205ENST00000567549 SLC25A16P16260 332 aa16.37■□□□□ 0.21
LINC01238-205ENST00000567549 CCNA2P20248 432 aa16.37■□□□□ 0.21
LINC01238-205ENST00000567549 MPGP29372 298 aa16.37■□□□□ 0.21
LINC01238-205ENST00000567549 PHC1P78364 1004 aa16.37■□□□□ 0.21
LINC01238-205ENST00000567549 EPS8Q12929 822 aa16.37■□□□□ 0.21
LINC01238-205ENST00000567549 GABRA6Q16445 453 aa16.37■□□□□ 0.21
LINC01238-205ENST00000567549 SYPL1Q16563 259 aa16.37■□□□□ 0.21
LINC01238-205ENST00000567549 MRPL2Q5T653 305 aaKnown RBP16.37■□□□□ 0.21
LINC01238-205ENST00000567549 MSANTD1Q6ZTZ1 278 aa16.37■□□□□ 0.21
LINC01238-205ENST00000567549 SPATA3Q8NHX4 192 aa16.37■□□□□ 0.21
LINC01238-205ENST00000567549 CNOT9Q92600 299 aaKnown RBP16.37■□□□□ 0.21
LINC01238-205ENST00000567549 TMEM45BQ96B21 275 aa16.37■□□□□ 0.21
LINC01238-205ENST00000567549 CACNG6Q9BXT2 260 aa16.37■□□□□ 0.21
LINC01238-205ENST00000567549 AMBRA1Q9C0C7 1298 aa16.37■□□□□ 0.21
LINC01238-205ENST00000567549 RAD21L1Q9H4I0 556 aa16.37■□□□□ 0.21
LINC01238-205ENST00000567549 NPAP1Q9NZP6 1156 aa16.37■□□□□ 0.21
LINC01238-205ENST00000567549 FBXO9Q9UK97 447 aaPredicted RBP16.37■□□□□ 0.21
LINC01238-205ENST00000567549 B3GALT5Q9Y2C3 310 aa16.37■□□□□ 0.21
LINC01238-205ENST00000567549 HEATR1Q9H583 2144 aaKnown RBP16.36■□□□□ 0.21
LINC01238-205ENST00000567549 ADAM11O75078 769 aa16.36■□□□□ 0.21
LINC01238-205ENST00000567549 CD8AP01732 235 aa16.36■□□□□ 0.21
LINC01238-205ENST00000567549 RPS4Y1P22090 263 aaKnown RBP16.36■□□□□ 0.21
LINC01238-205ENST00000567549 UFM1P61960 85 aa16.36■□□□□ 0.21
LINC01238-205ENST00000567549 GNGT1P63211 74 aa16.36■□□□□ 0.21
LINC01238-205ENST00000567549 BST1Q10588 318 aa16.36■□□□□ 0.21
LINC01238-205ENST00000567549 SLC17A1Q14916 467 aa16.36■□□□□ 0.21
LINC01238-205ENST00000567549 OTUD3Q5T2D3 398 aaPredicted RBP16.36■□□□□ 0.21
LINC01238-205ENST00000567549 NXNQ6DKJ4 435 aa16.36■□□□□ 0.21
LINC01238-205ENST00000567549 TMEM225Q6GV28 225 aa16.36■□□□□ 0.21
LINC01238-205ENST00000567549 WBP2NLQ6ICG8 309 aa16.36■□□□□ 0.21
LINC01238-205ENST00000567549 OLIG3Q7RTU3 272 aa16.36■□□□□ 0.21
LINC01238-205ENST00000567549 CCDC103Q8IW40 242 aa16.36■□□□□ 0.21
LINC01238-205ENST00000567549 ANKFN1Q8N957 763 aa16.36■□□□□ 0.21
LINC01238-205ENST00000567549 ZG16BQ96DA0 208 aa16.36■□□□□ 0.21
LINC01238-205ENST00000567549 ZNF317Q96PQ6 595 aaPredicted RBP16.36■□□□□ 0.21
LINC01238-205ENST00000567549 C20orf27Q9GZN8 174 aa16.36■□□□□ 0.21
LINC01238-205ENST00000567549 YAE1D1Q9NRH1 226 aa16.36■□□□□ 0.21
LINC01238-205ENST00000567549 IFT52Q9Y366 437 aa16.36■□□□□ 0.21
LINC01238-205ENST00000567549 TMEM72A0PK05 275 aa16.35■□□□□ 0.21
LINC01238-205ENST00000567549 H7C417 338 aa16.35■□□□□ 0.21
LINC01238-205ENST00000567549 SLC22A3O75751 556 aa16.35■□□□□ 0.21
LINC01238-205ENST00000567549 CHRM4P08173 479 aa16.35■□□□□ 0.21
LINC01238-205ENST00000567549 NCF2P19878 526 aaPredicted RBP16.35■□□□□ 0.21
LINC01238-205ENST00000567549 CRATP43155 626 aa16.35■□□□□ 0.21
LINC01238-205ENST00000567549 NME5P56597 212 aa16.35■□□□□ 0.21
LINC01238-205ENST00000567549 GUCY1A3Q02108 690 aa16.35■□□□□ 0.21
LINC01238-205ENST00000567549 PDCD4Q53EL6 469 aaKnown RBP16.35■□□□□ 0.21
LINC01238-205ENST00000567549 DNM1P46Q6ZS02 220 aa16.35■□□□□ 0.21
LINC01238-205ENST00000567549 AAED1Q7RTV5 226 aa16.35■□□□□ 0.21
LINC01238-205ENST00000567549 ATG4DQ86TL0 474 aaPredicted RBP16.35■□□□□ 0.21
LINC01238-205ENST00000567549 ANKRD42Q8N9B4 389 aa16.35■□□□□ 0.21
LINC01238-205ENST00000567549 OR52P1PQ8NH57 321 aa16.35■□□□□ 0.21
LINC01238-205ENST00000567549 ITCHQ96J02 903 aa16.35■□□□□ 0.21
LINC01238-205ENST00000567549 SLC17A5Q9NRA2 495 aa16.35■□□□□ 0.21
LINC01238-205ENST00000567549 PNPOQ9NVS9 261 aa16.35■□□□□ 0.21
LINC01238-205ENST00000567549 FKBP7Q9Y680 259 aa16.35■□□□□ 0.21
LINC01238-205ENST00000567549 ATP23Q9Y6H3 246 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms