RNA–Protein interactions for RNA: ENST00000566600.1

NME3-209, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 913 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-209ENST00000566600 TAPBPLQ9BX59 468 aa23.35■■□□□ 1.33
NME3-209ENST00000566600 KLHL9Q9P2J3 617 aa23.35■■□□□ 1.33
NME3-209ENST00000566600 PACSIN3Q9UKS6 424 aa23.35■■□□□ 1.33
NME3-209ENST00000566600 A0A087WUJ7 227 aa23.34■■□□□ 1.33
NME3-209ENST00000566600 TRAPPC13A5PLN9 417 aa23.34■■□□□ 1.33
NME3-209ENST00000566600 CPSF4LA6NMK7 179 aaKnown RBP23.34■■□□□ 1.33
NME3-209ENST00000566600 SMAD9O15198 467 aaKnown RBP23.34■■□□□ 1.33
NME3-209ENST00000566600 NPIPB7O75200 414 aa23.34■■□□□ 1.33
NME3-209ENST00000566600 UBOX5O94941 541 aa23.34■■□□□ 1.33
NME3-209ENST00000566600 AHSA1O95433 338 aa23.34■■□□□ 1.33
NME3-209ENST00000566600 TCN1P20061 433 aaPredicted RBP23.34■■□□□ 1.33
NME3-209ENST00000566600 ASCL1P50553 236 aa23.34■■□□□ 1.33
NME3-209ENST00000566600 CDH12P55289 794 aa23.34■■□□□ 1.33
NME3-209ENST00000566600 GUSBP1Q15486 140 aa23.34■■□□□ 1.33
NME3-209ENST00000566600 ADAMTS16Q8TE57 1224 aa23.34■■□□□ 1.33
NME3-209ENST00000566600 NAA11Q9BSU3 229 aaPredicted RBP23.34■■□□□ 1.33
NME3-209ENST00000566600 GORASP2Q9H8Y8 452 aa23.34■■□□□ 1.33
NME3-209ENST00000566600 CACNA1CQ13936 2221 aa23.34■■□□□ 1.33
NME3-209ENST00000566600 INTS1Q8N201 2190 aaKnown RBP23.34■■□□□ 1.33
NME3-209ENST00000566600 IGHV3-15A0A0B4J1V0 119 aa23.33■■□□□ 1.33
NME3-209ENST00000566600 CHP2O43745 196 aa23.33■■□□□ 1.33
NME3-209ENST00000566600 CYTIPO60759 359 aa23.33■■□□□ 1.33
NME3-209ENST00000566600 IMPDH2P12268 514 aa23.33■■□□□ 1.33
NME3-209ENST00000566600 KIR2DL2P43627 348 aaPredicted RBP23.33■■□□□ 1.33
NME3-209ENST00000566600 FAM156AQ8NDB6 213 aa23.33■■□□□ 1.33
NME3-209ENST00000566600 ABHD3Q8WU67 409 aa23.33■■□□□ 1.33
NME3-209ENST00000566600 GEMIN6Q8WXD5 167 aaKnown RBP23.33■■□□□ 1.33
NME3-209ENST00000566600 EPYCQ99645 322 aa23.33■■□□□ 1.33
NME3-209ENST00000566600 JKAMPQ9P055 326 aa23.33■■□□□ 1.33
NME3-209ENST00000566600 PRPF19Q9UMS4 504 aaKnown RBP23.33■■□□□ 1.33
NME3-209ENST00000566600 SAMD4AQ9UPU9 718 aaKnown RBP23.33■■□□□ 1.33
NME3-209ENST00000566600 HECTD1Q9ULT8 2610 aa23.32■■□□□ 1.32
NME3-209ENST00000566600 LIPT2A6NK58 231 aa23.32■■□□□ 1.32
NME3-209ENST00000566600 EEF1E1-BLOC1S5C9J1V9 151 aa23.32■■□□□ 1.32
NME3-209ENST00000566600 EEF1E1O43324 174 aaKnown RBP23.32■■□□□ 1.32
NME3-209ENST00000566600 OR2T1O43869 369 aa23.32■■□□□ 1.32
NME3-209ENST00000566600 TNFRSF1BP20333 461 aa23.32■■□□□ 1.32
NME3-209ENST00000566600 FPR1P21462 350 aa23.32■■□□□ 1.32
NME3-209ENST00000566600 OR1E2P47887 323 aa23.32■■□□□ 1.32
NME3-209ENST00000566600 SIRPAP78324 504 aa23.32■■□□□ 1.32
NME3-209ENST00000566600 TFF3Q07654 80 aa23.32■■□□□ 1.32
NME3-209ENST00000566600 RASGEF1BQ0VAM2 473 aa23.32■■□□□ 1.32
NME3-209ENST00000566600 CEACAM7Q14002 265 aa23.32■■□□□ 1.32
NME3-209ENST00000566600 FBXL19-AS1Q494R0 122 aa23.32■■□□□ 1.32
NME3-209ENST00000566600 IFI44LQ53G44 452 aa23.32■■□□□ 1.32
NME3-209ENST00000566600 TMEM201Q5SNT2 666 aa23.32■■□□□ 1.32
NME3-209ENST00000566600 DEF8Q6ZN54 512 aa23.32■■□□□ 1.32
NME3-209ENST00000566600 FKBP9P1Q75LS8 142 aa23.32■■□□□ 1.32
NME3-209ENST00000566600 OR6K3Q8NGY3 331 aa23.32■■□□□ 1.32
NME3-209ENST00000566600 MFSD8Q8NHS3 518 aa23.32■■□□□ 1.32
NME3-209ENST00000566600 PIGXQ8TBF5 258 aa23.32■■□□□ 1.32
NME3-209ENST00000566600 STARD4Q96DR4 205 aa23.32■■□□□ 1.32
NME3-209ENST00000566600 DNAJA3Q96EY1 480 aa23.32■■□□□ 1.32
NME3-209ENST00000566600 MPP4Q96JB8 637 aa23.32■■□□□ 1.32
NME3-209ENST00000566600 TMEM43Q9BTV4 400 aa23.32■■□□□ 1.32
NME3-209ENST00000566600 DCAF13Q9NV06 445 aaKnown RBP23.32■■□□□ 1.32
NME3-209ENST00000566600 TAS2R1Q9NYW7 299 aa23.32■■□□□ 1.32
NME3-209ENST00000566600 KLHL13Q9P2N7 655 aa23.32■■□□□ 1.32
NME3-209ENST00000566600 FOXD3Q9UJU5 478 aaPredicted RBP23.32■■□□□ 1.32
NME3-209ENST00000566600 SNX13Q9Y5W8 968 aa23.32■■□□□ 1.32
NME3-209ENST00000566600 MSTNO14793 375 aa23.31■■□□□ 1.32
NME3-209ENST00000566600 IFNW1P05000 195 aa23.31■■□□□ 1.32
NME3-209ENST00000566600 YES1P07947 543 aa23.31■■□□□ 1.32
NME3-209ENST00000566600 IFNA8P32881 189 aa23.31■■□□□ 1.32
NME3-209ENST00000566600 TAS2R41P59536 307 aa23.31■■□□□ 1.32
NME3-209ENST00000566600 H3F3AP84243 136 aa23.31■■□□□ 1.32
NME3-209ENST00000566600 EGR4Q05215 589 aa23.31■■□□□ 1.32
NME3-209ENST00000566600 PDK3Q15120 406 aa23.31■■□□□ 1.32
NME3-209ENST00000566600 OR7A5Q15622 319 aa23.31■■□□□ 1.32
NME3-209ENST00000566600 PAQR6Q6TCH4 344 aa23.31■■□□□ 1.32
NME3-209ENST00000566600 VTCN1Q7Z7D3 282 aa23.31■■□□□ 1.32
NME3-209ENST00000566600 HSH2DQ96JZ2 352 aa23.31■■□□□ 1.32
NME3-209ENST00000566600 CLEC4AQ9UMR7 237 aa23.31■■□□□ 1.32
NME3-209ENST00000566600 PROCRQ9UNN8 238 aa23.31■■□□□ 1.32
NME3-209ENST00000566600 ASH1LQ9NR48 2969 aaKnown RBP23.3■■□□□ 1.32
NME3-209ENST00000566600 TRAV36DV7A0A075B6V5 113 aa23.3■■□□□ 1.32
NME3-209ENST00000566600 OR5F1O95221 314 aa23.3■■□□□ 1.32
NME3-209ENST00000566600 THRBP10828 461 aa23.3■■□□□ 1.32
NME3-209ENST00000566600 CD8BP10966 210 aa23.3■■□□□ 1.32
NME3-209ENST00000566600 ABLIM2Q6H8Q1 611 aa23.3■■□□□ 1.32
NME3-209ENST00000566600 VWA1Q6PCB0 445 aa23.3■■□□□ 1.32
NME3-209ENST00000566600 LINC00114Q6XXX2 140 aa23.3■■□□□ 1.32
NME3-209ENST00000566600 BTLAQ7Z6A9 289 aa23.3■■□□□ 1.32
NME3-209ENST00000566600 OR6S1Q8NH40 331 aa23.3■■□□□ 1.32
NME3-209ENST00000566600 NSMCE2Q96MF7 247 aa23.3■■□□□ 1.32
NME3-209ENST00000566600 BCO1Q9HAY6 547 aa23.3■■□□□ 1.32
NME3-209ENST00000566600 EMC3Q9P0I2 261 aa23.3■■□□□ 1.32
NME3-209ENST00000566600 SLC7A7Q9UM01 511 aa23.3■■□□□ 1.32
NME3-209ENST00000566600 IGKV1D-42A0A075B6H8 117 aa23.29■■□□□ 1.32
NME3-209ENST00000566600 ZNF724A8MTY0 619 aa23.29■■□□□ 1.32
NME3-209ENST00000566600 ARPC2O15144 300 aa23.29■■□□□ 1.32
NME3-209ENST00000566600 SMNDC1O75940 238 aaKnown RBP eCLIP23.29■■□□□ 1.32
NME3-209ENST00000566600 GRNP28799 593 aaKnown RBP23.29■■□□□ 1.32
NME3-209ENST00000566600 GTF2E2P29084 291 aaKnown RBP23.29■■□□□ 1.32
NME3-209ENST00000566600 AGTR1P30556 359 aa23.29■■□□□ 1.32
NME3-209ENST00000566600 RPS5P46782 204 aaKnown RBP23.29■■□□□ 1.32
NME3-209ENST00000566600 MFSD13AQ14CX5 517 aa23.29■■□□□ 1.32
NME3-209ENST00000566600 DNAL1Q4LDG9 190 aa23.29■■□□□ 1.32
NME3-209ENST00000566600 FAM69AQ5T7M9 428 aa23.29■■□□□ 1.32
NME3-209ENST00000566600 SP5Q6BEB4 398 aaPredicted RBP23.29■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms