RNA–Protein interactions for RNA: ENST00000566550.1

HERPUD1-211, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 511 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-211ENST00000566550 GMPPBQ9Y5P6 360 aa2.83□□□□□ -1.96
HERPUD1-211ENST00000566550 MYO3BQ8WXR4 1341 aa2.83□□□□□ -1.96
HERPUD1-211ENST00000566550 BRD4O60885 1362 aaPredicted RBP2.83□□□□□ -1.96
HERPUD1-211ENST00000566550 MAGI3Q5TCQ9 1506 aa2.83□□□□□ -1.96
HERPUD1-211ENST00000566550 NEURL4Q96JN8 1562 aa2.83□□□□□ -1.96
HERPUD1-211ENST00000566550 RSPH10B2B2RC85 870 aa2.82□□□□□ -1.96
HERPUD1-211ENST00000566550 TRDCB7Z8K6 153 aa2.82□□□□□ -1.96
HERPUD1-211ENST00000566550 C16orf97H3BN30 126 aa2.82□□□□□ -1.96
HERPUD1-211ENST00000566550 PRKNO60260 465 aaPredicted RBP2.82□□□□□ -1.96
HERPUD1-211ENST00000566550 OR10H3O60404 316 aa2.82□□□□□ -1.96
HERPUD1-211ENST00000566550 MAGEC1O60732 1142 aa2.82□□□□□ -1.96
HERPUD1-211ENST00000566550 ENTPD5O75356 428 aa2.82□□□□□ -1.96
HERPUD1-211ENST00000566550 CBR3O75828 277 aa2.82□□□□□ -1.96
HERPUD1-211ENST00000566550 CLPTM1O96005 669 aa2.82□□□□□ -1.96
HERPUD1-211ENST00000566550 EDN1P05305 212 aa2.82□□□□□ -1.96
HERPUD1-211ENST00000566550 GLAP06280 429 aa2.82□□□□□ -1.96
HERPUD1-211ENST00000566550 RSPH10BP0C881 870 aa2.82□□□□□ -1.96
HERPUD1-211ENST00000566550 UBTFL1P0CB47 393 aaPredicted RBP2.82□□□□□ -1.96
HERPUD1-211ENST00000566550 NR2C1P13056 603 aa2.82□□□□□ -1.96
HERPUD1-211ENST00000566550 DPEP1P16444 411 aa2.82□□□□□ -1.96
HERPUD1-211ENST00000566550 MGMTP16455 207 aa2.82□□□□□ -1.96
HERPUD1-211ENST00000566550 SDC1P18827 310 aa2.82□□□□□ -1.96
HERPUD1-211ENST00000566550 UGT1A4P22310 534 aa2.82□□□□□ -1.96
HERPUD1-211ENST00000566550 FGF9P31371 208 aaPredicted RBP2.82□□□□□ -1.96
HERPUD1-211ENST00000566550 RPL9P32969 192 aaKnown RBP2.82□□□□□ -1.96
HERPUD1-211ENST00000566550 CFHR2P36980 270 aa2.82□□□□□ -1.96
HERPUD1-211ENST00000566550 NAA10P41227 235 aaPredicted RBP2.82□□□□□ -1.96
HERPUD1-211ENST00000566550 MAP3K8P41279 467 aa2.82□□□□□ -1.96
HERPUD1-211ENST00000566550 MRPL19P49406 292 aaKnown RBP2.82□□□□□ -1.96
HERPUD1-211ENST00000566550 CRISP1P54107 249 aa2.82□□□□□ -1.96
HERPUD1-211ENST00000566550 HMGCS2P54868 508 aa2.82□□□□□ -1.96
HERPUD1-211ENST00000566550 FOXG1P55316 489 aaPredicted RBP2.82□□□□□ -1.96
HERPUD1-211ENST00000566550 ERVK-25P63136 954 aa2.82□□□□□ -1.96
HERPUD1-211ENST00000566550 SCRN3Q0VDG4 424 aa2.82□□□□□ -1.96
HERPUD1-211ENST00000566550 PMS2P3Q13401 168 aa2.82□□□□□ -1.96
HERPUD1-211ENST00000566550 NCF4Q15080 339 aa2.82□□□□□ -1.96
HERPUD1-211ENST00000566550 TSC22D1Q15714 1073 aa2.82□□□□□ -1.96
HERPUD1-211ENST00000566550 TAB1Q15750 504 aa2.82□□□□□ -1.96
HERPUD1-211ENST00000566550 CD226Q15762 336 aa2.82□□□□□ -1.96
HERPUD1-211ENST00000566550 ZNF77Q15935 545 aa2.82□□□□□ -1.96
HERPUD1-211ENST00000566550 GABRA6Q16445 453 aa2.82□□□□□ -1.96
HERPUD1-211ENST00000566550 NDUFA9Q16795 377 aa2.82□□□□□ -1.96
HERPUD1-211ENST00000566550 DUSP7Q16829 419 aa2.82□□□□□ -1.96
HERPUD1-211ENST00000566550 TIGITQ495A1 244 aa2.82□□□□□ -1.96
HERPUD1-211ENST00000566550 PTPN20Q4JDL3 420 aa2.82□□□□□ -1.96
HERPUD1-211ENST00000566550 SAMD4BQ5PRF9 694 aaKnown RBP2.82□□□□□ -1.96
HERPUD1-211ENST00000566550 H3F3CQ6NXT2 135 aa2.82□□□□□ -1.96
HERPUD1-211ENST00000566550 CYP4Z1Q86W10 505 aa2.82□□□□□ -1.96
HERPUD1-211ENST00000566550 IFNEQ86WN2 208 aa2.82□□□□□ -1.96
HERPUD1-211ENST00000566550 MFSD6LQ8IWD5 586 aa2.82□□□□□ -1.96
HERPUD1-211ENST00000566550 ZBED8Q8IZ13 594 aa2.82□□□□□ -1.96
HERPUD1-211ENST00000566550 PELI3Q8N2H9 469 aa2.82□□□□□ -1.96
HERPUD1-211ENST00000566550 TPRX1Q8N7U7 411 aa2.82□□□□□ -1.96
HERPUD1-211ENST00000566550 ACOT4Q8N9L9 421 aa2.82□□□□□ -1.96
HERPUD1-211ENST00000566550 TTC29Q8NA56 475 aaPredicted RBP2.82□□□□□ -1.96
HERPUD1-211ENST00000566550 SUMF1Q8NBK3 374 aa2.82□□□□□ -1.96
HERPUD1-211ENST00000566550 OR5T2Q8NGG2 359 aa2.82□□□□□ -1.96
HERPUD1-211ENST00000566550 GPR151Q8TDV0 419 aa2.82□□□□□ -1.96
HERPUD1-211ENST00000566550 GATAD1Q8WUU5 269 aa2.82□□□□□ -1.96
HERPUD1-211ENST00000566550 DYRK2Q92630 601 aa2.82□□□□□ -1.96
HERPUD1-211ENST00000566550 NTNG2Q96CW9 530 aa2.82□□□□□ -1.96
HERPUD1-211ENST00000566550 ECHDC3Q96DC8 303 aa2.82□□□□□ -1.96
HERPUD1-211ENST00000566550 ZBED6CLQ96FA7 236 aaPredicted RBP2.82□□□□□ -1.96
HERPUD1-211ENST00000566550 MS4A14Q96JA4 679 aa2.82□□□□□ -1.96
HERPUD1-211ENST00000566550 C8orf76Q96K31 380 aa2.82□□□□□ -1.96
HERPUD1-211ENST00000566550 XPO6Q96QU8 1125 aaKnown RBP2.82□□□□□ -1.96
HERPUD1-211ENST00000566550 NIPSNAP3BQ9BS92 247 aa2.82□□□□□ -1.96
HERPUD1-211ENST00000566550 CNPY3Q9BT09 278 aa2.82□□□□□ -1.96
HERPUD1-211ENST00000566550 CHID1Q9BWS9 393 aa2.82□□□□□ -1.96
HERPUD1-211ENST00000566550 RAB34Q9BZG1 259 aa2.82□□□□□ -1.96
HERPUD1-211ENST00000566550 WDR41Q9HAD4 459 aa2.82□□□□□ -1.96
HERPUD1-211ENST00000566550 CSNK1G1Q9HCP0 422 aa2.82□□□□□ -1.96
HERPUD1-211ENST00000566550 DMAP1Q9NPF5 467 aaPredicted RBP2.82□□□□□ -1.96
HERPUD1-211ENST00000566550 SAMSN1Q9NSI8 373 aaKnown RBP2.82□□□□□ -1.96
HERPUD1-211ENST00000566550 ADA2Q9NZK5 511 aa2.82□□□□□ -1.96
HERPUD1-211ENST00000566550 ADAM22Q9P0K1 906 aa2.82□□□□□ -1.96
HERPUD1-211ENST00000566550 LSM7Q9UK45 103 aaKnown RBP2.82□□□□□ -1.96
HERPUD1-211ENST00000566550 SCML2Q9UQR0 700 aa2.82□□□□□ -1.96
HERPUD1-211ENST00000566550 CBY1Q9Y3M2 126 aa2.82□□□□□ -1.96
HERPUD1-211ENST00000566550 GRIN2DO15399 1336 aa2.82□□□□□ -1.96
HERPUD1-211ENST00000566550 STK36Q9NRP7 1315 aa2.82□□□□□ -1.96
HERPUD1-211ENST00000566550 RGS12O14924 1447 aa2.82□□□□□ -1.96
HERPUD1-211ENST00000566550 ARAP3Q8WWN8 1544 aa2.82□□□□□ -1.96
HERPUD1-211ENST00000566550 CAMSAP1Q5T5Y3 1602 aa2.82□□□□□ -1.96
HERPUD1-211ENST00000566550 CUL7Q14999 1698 aa2.82□□□□□ -1.96
HERPUD1-211ENST00000566550 COL11A2P13942 1736 aaPredicted RBP2.82□□□□□ -1.96
HERPUD1-211ENST00000566550 SUPT6HQ7KZ85 1726 aaKnown RBP2.82□□□□□ -1.96
HERPUD1-211ENST00000566550 NSG1A0A0A6YYJ2 146 aa2.81□□□□□ -1.96
HERPUD1-211ENST00000566550 A0A1B0GW15 77 aa2.81□□□□□ -1.96
HERPUD1-211ENST00000566550 CCDC182A6NF36 153 aa2.81□□□□□ -1.96
HERPUD1-211ENST00000566550 SAGE2PA6NJ88 616 aa2.81□□□□□ -1.96
HERPUD1-211ENST00000566550 CENPXA8MT69 81 aa2.81□□□□□ -1.96
HERPUD1-211ENST00000566550 ZNF99A8MXY4 864 aaPredicted RBP2.81□□□□□ -1.96
HERPUD1-211ENST00000566550 SIRPB1O00241 398 aa2.81□□□□□ -1.96
HERPUD1-211ENST00000566550 TNFSF12O43508 249 aa2.81□□□□□ -1.96
HERPUD1-211ENST00000566550 CHST1O43916 411 aa2.81□□□□□ -1.96
HERPUD1-211ENST00000566550 SLC19A2O60779 497 aa2.81□□□□□ -1.96
HERPUD1-211ENST00000566550 CRTAPO75718 401 aaPredicted RBP2.81□□□□□ -1.96
HERPUD1-211ENST00000566550 FARS2O95363 451 aaKnown RBP2.81□□□□□ -1.96
HERPUD1-211ENST00000566550 C1orf105O95561 183 aa2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms