RNA–Protein interactions for RNA: ENST00000566292.5

USB1-213, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-213ENST00000566292 NDUFS7O75251 213 aa16.11■□□□□ 0.17
USB1-213ENST00000566292 TFPTP0C1Z6 253 aa16.11■□□□□ 0.17
USB1-213ENST00000566292 CRATP43155 626 aa16.11■□□□□ 0.17
USB1-213ENST00000566292 MAP2K6P52564 334 aa16.11■□□□□ 0.17
USB1-213ENST00000566292 CDH11P55287 796 aa16.11■□□□□ 0.17
USB1-213ENST00000566292 DSTNP60981 165 aa16.11■□□□□ 0.17
USB1-213ENST00000566292 KRTAP1-1Q07627 177 aa16.11■□□□□ 0.17
USB1-213ENST00000566292 SPOCK1Q08629 439 aa16.11■□□□□ 0.17
USB1-213ENST00000566292 SLC17A1Q14916 467 aa16.11■□□□□ 0.17
USB1-213ENST00000566292 GABRA6Q16445 453 aa16.11■□□□□ 0.17
USB1-213ENST00000566292 RPS26P11Q5JNZ5 115 aaPredicted RBP16.11■□□□□ 0.17
USB1-213ENST00000566292 PAQR6Q6TCH4 344 aa16.11■□□□□ 0.17
USB1-213ENST00000566292 MSANTD1Q6ZTZ1 278 aa16.11■□□□□ 0.17
USB1-213ENST00000566292 DTX2Q86UW9 622 aa16.11■□□□□ 0.17
USB1-213ENST00000566292 ZNF440Q8IYI8 595 aa16.11■□□□□ 0.17
USB1-213ENST00000566292 SLC38A5Q8WUX1 472 aa16.11■□□□□ 0.17
USB1-213ENST00000566292 VPS33AQ96AX1 596 aa16.11■□□□□ 0.17
USB1-213ENST00000566292 MUS81Q96NY9 551 aa16.11■□□□□ 0.17
USB1-213ENST00000566292 NAA11Q9BSU3 229 aaPredicted RBP16.11■□□□□ 0.17
USB1-213ENST00000566292 ZNF443Q9Y2A4 671 aaPredicted RBP16.11■□□□□ 0.17
USB1-213ENST00000566292 CHST2Q9Y4C5 530 aa16.11■□□□□ 0.17
USB1-213ENST00000566292 INAFM1C9JVW0 142 aa16.1■□□□□ 0.17
USB1-213ENST00000566292 UBDO15205 165 aa16.1■□□□□ 0.17
USB1-213ENST00000566292 ANP32DO95626 131 aa16.1■□□□□ 0.17
USB1-213ENST00000566292 IGHV4-39P01824 125 aa16.1■□□□□ 0.17
USB1-213ENST00000566292 UQCRBP14927 111 aa16.1■□□□□ 0.17
USB1-213ENST00000566292 PTNP21246 168 aa16.1■□□□□ 0.17
USB1-213ENST00000566292 ACVR1BP36896 505 aa16.1■□□□□ 0.17
USB1-213ENST00000566292 ZNF83P51522 516 aa16.1■□□□□ 0.17
USB1-213ENST00000566292 POLR2JP52435 117 aaKnown RBP16.1■□□□□ 0.17
USB1-213ENST00000566292 CRISP3P54108 245 aa16.1■□□□□ 0.17
USB1-213ENST00000566292 CEACAM7Q14002 265 aa16.1■□□□□ 0.17
USB1-213ENST00000566292 VEZF1Q14119 521 aa16.1■□□□□ 0.17
USB1-213ENST00000566292 LIN52Q52LA3 116 aa16.1■□□□□ 0.17
USB1-213ENST00000566292 BEND6Q5SZJ8 279 aaPredicted RBP16.1■□□□□ 0.17
USB1-213ENST00000566292 C9orf135Q5VTT2 229 aa16.1■□□□□ 0.17
USB1-213ENST00000566292 PRIMA1Q86XR5 153 aa16.1■□□□□ 0.17
USB1-213ENST00000566292 CLIP4Q8N3C7 705 aa16.1■□□□□ 0.17
USB1-213ENST00000566292 TMEM99Q8N816 258 aa16.1■□□□□ 0.17
USB1-213ENST00000566292 MAPK1IP1LQ8NDC0 245 aa16.1■□□□□ 0.17
USB1-213ENST00000566292 TMEM19Q96HH6 336 aa16.1■□□□□ 0.17
USB1-213ENST00000566292 ITCHQ96J02 903 aa16.1■□□□□ 0.17
USB1-213ENST00000566292 AMBRA1Q9C0C7 1298 aa16.1■□□□□ 0.17
USB1-213ENST00000566292 GRIP2Q9C0E4 1043 aa16.1■□□□□ 0.17
USB1-213ENST00000566292 SLCO5A1Q9H2Y9 848 aa16.1■□□□□ 0.17
USB1-213ENST00000566292 RMND5AQ9H871 391 aa16.1■□□□□ 0.17
USB1-213ENST00000566292 SLC7A10Q9NS82 523 aa16.1■□□□□ 0.17
USB1-213ENST00000566292 CALML5Q9NZT1 146 aa16.1■□□□□ 0.17
USB1-213ENST00000566292 GDF2Q9UK05 429 aaPredicted RBP16.1■□□□□ 0.17
USB1-213ENST00000566292 SLC9A8Q9Y2E8 581 aa16.1■□□□□ 0.17
USB1-213ENST00000566292 SONP18583 2426 aaKnown RBP16.1■□□□□ 0.17
USB1-213ENST00000566292 ABCA1O95477 2261 aa16.1■□□□□ 0.17
USB1-213ENST00000566292 LIPT2A6NK58 231 aa16.09■□□□□ 0.17
USB1-213ENST00000566292 RNF223E7ERA6 249 aa16.09■□□□□ 0.17
USB1-213ENST00000566292 KLF11O14901 512 aa16.09■□□□□ 0.17
USB1-213ENST00000566292 AKR7A3O95154 331 aa16.09■□□□□ 0.17
USB1-213ENST00000566292 PRG2P13727 222 aa16.09■□□□□ 0.17
USB1-213ENST00000566292 CXCR1P25024 350 aa16.09■□□□□ 0.17
USB1-213ENST00000566292 CD40P25942 277 aa16.09■□□□□ 0.17
USB1-213ENST00000566292 IDUAP35475 653 aa16.09■□□□□ 0.17
USB1-213ENST00000566292 BNIP2Q12982 314 aa16.09■□□□□ 0.17
USB1-213ENST00000566292 ETFDHQ16134 617 aa16.09■□□□□ 0.17
USB1-213ENST00000566292 OTUD3Q5T2D3 398 aaPredicted RBP16.09■□□□□ 0.17
USB1-213ENST00000566292 TSPO2Q5TGU0 170 aa16.09■□□□□ 0.17
USB1-213ENST00000566292 RNF220Q5VTB9 566 aa16.09■□□□□ 0.17
USB1-213ENST00000566292 PIAS4Q8N2W9 510 aaPredicted RBP16.09■□□□□ 0.17
USB1-213ENST00000566292 CADM2Q8N3J6 435 aa16.09■□□□□ 0.17
USB1-213ENST00000566292 ZIC4Q8N9L1 334 aa16.09■□□□□ 0.17
USB1-213ENST00000566292 WDR31Q8NA23 367 aa16.09■□□□□ 0.17
USB1-213ENST00000566292 PAIP1Q9H074 479 aaKnown RBP16.09■□□□□ 0.17
USB1-213ENST00000566292 ALG2Q9H553 416 aa16.09■□□□□ 0.17
USB1-213ENST00000566292 DCTN4Q9UJW0 460 aa16.09■□□□□ 0.17
USB1-213ENST00000566292 ANK3Q12955 4377 aaKnown RBP16.09■□□□□ 0.17
USB1-213ENST00000566292 CHD3Q12873 2000 aaKnown RBP16.09■□□□□ 0.17
USB1-213ENST00000566292 E7EQL1 145 aa16.08■□□□□ 0.16
USB1-213ENST00000566292 NUDT7P0C024 238 aa16.08■□□□□ 0.16
USB1-213ENST00000566292 PTAFRP25105 342 aa16.08■□□□□ 0.16
USB1-213ENST00000566292 SLC25A3Q00325 362 aa16.08■□□□□ 0.16
USB1-213ENST00000566292 OR7A5Q15622 319 aa16.08■□□□□ 0.16
USB1-213ENST00000566292 C6orf10Q5SRN2 563 aa16.08■□□□□ 0.16
USB1-213ENST00000566292 WBP2NLQ6ICG8 309 aa16.08■□□□□ 0.16
USB1-213ENST00000566292 OR7E24Q6IFN5 339 aa16.08■□□□□ 0.16
USB1-213ENST00000566292 EPGNQ6UW88 154 aa16.08■□□□□ 0.16
USB1-213ENST00000566292 TMEM108Q6UXF1 575 aa16.08■□□□□ 0.16
USB1-213ENST00000566292 B3GLCTQ6Y288 498 aa16.08■□□□□ 0.16
USB1-213ENST00000566292 DNM1P46Q6ZS02 220 aa16.08■□□□□ 0.16
USB1-213ENST00000566292 MIER2Q8N344 545 aa16.08■□□□□ 0.16
USB1-213ENST00000566292 OR9K2Q8NGE7 335 aa16.08■□□□□ 0.16
USB1-213ENST00000566292 GTF2H4Q92759 462 aa16.08■□□□□ 0.16
USB1-213ENST00000566292 TMEM45BQ96B21 275 aa16.08■□□□□ 0.16
USB1-213ENST00000566292 RADILQ96JH8 1075 aa16.08■□□□□ 0.16
USB1-213ENST00000566292 C1QTNF6Q9BXI9 259 aa16.08■□□□□ 0.16
USB1-213ENST00000566292 FAIMQ9NVQ4 179 aa16.08■□□□□ 0.16
USB1-213ENST00000566292 PARPBPQ9NWS1 579 aa16.08■□□□□ 0.16
USB1-213ENST00000566292 UPB1Q9UBR1 384 aa16.08■□□□□ 0.16
USB1-213ENST00000566292 MGAT4BQ9UQ53 548 aa16.08■□□□□ 0.16
USB1-213ENST00000566292 PCDHB14Q9Y5E9 798 aa16.08■□□□□ 0.16
USB1-213ENST00000566292 USH1CQ9Y6N9 552 aa16.08■□□□□ 0.16
USB1-213ENST00000566292 A0A0G2JPF8 293 aa16.07■□□□□ 0.16
USB1-213ENST00000566292 FAM234BA2RU67 622 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms