RNA–Protein interactions for RNA: ENST00000564638.1

MAP1LC3B-205, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 2

Gene MAP1LC3B, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-205ENST00000564638 DNAJA4Q8WW22 397 aaPredicted RBP6.8□□□□□ -1.32
MAP1LC3B-205ENST00000564638 EFHD2Q96C19 240 aaPredicted RBP6.8□□□□□ -1.32
MAP1LC3B-205ENST00000564638 SGTBQ96EQ0 304 aa6.8□□□□□ -1.32
MAP1LC3B-205ENST00000564638 VMP1Q96GC9 406 aa6.8□□□□□ -1.32
MAP1LC3B-205ENST00000564638 LCORQ96JN0 433 aaPredicted RBP6.8□□□□□ -1.32
MAP1LC3B-205ENST00000564638 GAL3ST4Q96RP7 486 aa6.8□□□□□ -1.32
MAP1LC3B-205ENST00000564638 IFT27Q9BW83 186 aa6.8□□□□□ -1.32
MAP1LC3B-205ENST00000564638 TAPBPLQ9BX59 468 aa6.8□□□□□ -1.32
MAP1LC3B-205ENST00000564638 OR51E2Q9H255 320 aa6.8□□□□□ -1.32
MAP1LC3B-205ENST00000564638 ZBTB20Q9HC78 741 aaPredicted RBP6.8□□□□□ -1.32
MAP1LC3B-205ENST00000564638 HHATLQ9HCP6 504 aa6.8□□□□□ -1.32
MAP1LC3B-205ENST00000564638 EXOSC4Q9NPD3 245 aaKnown RBP6.8□□□□□ -1.32
MAP1LC3B-205ENST00000564638 ATP13A2Q9NQ11 1180 aa6.8□□□□□ -1.32
MAP1LC3B-205ENST00000564638 C20orf141Q9NUB4 165 aa6.8□□□□□ -1.32
MAP1LC3B-205ENST00000564638 OSGIN1Q9UJX0 560 aa6.8□□□□□ -1.32
MAP1LC3B-205ENST00000564638 PTRH2Q9Y3E5 179 aaKnown RBP6.8□□□□□ -1.32
MAP1LC3B-205ENST00000564638 A3GALT2U3KPV4 340 aa6.8□□□□□ -1.32
MAP1LC3B-205ENST00000564638 LRBAP50851 2863 aa6.79□□□□□ -1.32
MAP1LC3B-205ENST00000564638 C2orf92A0A1B0GVN3 265 aa6.79□□□□□ -1.32
MAP1LC3B-205ENST00000564638 HTR3EA5X5Y0 456 aa6.79□□□□□ -1.32
MAP1LC3B-205ENST00000564638 METTL15A6NJ78 407 aa6.79□□□□□ -1.32
MAP1LC3B-205ENST00000564638 ELOA3DA6NLF2 546 aaPredicted RBP6.79□□□□□ -1.32
MAP1LC3B-205ENST00000564638 OR6C76A6NM76 312 aa6.79□□□□□ -1.32
MAP1LC3B-205ENST00000564638 GTPBP1O00178 669 aaKnown RBP6.79□□□□□ -1.32
MAP1LC3B-205ENST00000564638 BHLHE40O14503 412 aa6.79□□□□□ -1.32
MAP1LC3B-205ENST00000564638 NKX2-8O15522 239 aa6.79□□□□□ -1.32
MAP1LC3B-205ENST00000564638 REM1O75628 298 aa6.79□□□□□ -1.32
MAP1LC3B-205ENST00000564638 UTS2O95399 124 aa6.79□□□□□ -1.32
MAP1LC3B-205ENST00000564638 DDAH2O95865 285 aa6.79□□□□□ -1.32
MAP1LC3B-205ENST00000564638 IFNGP01579 166 aa6.79□□□□□ -1.32
MAP1LC3B-205ENST00000564638 IGKV3-11P04433 115 aa6.79□□□□□ -1.32
MAP1LC3B-205ENST00000564638 ADRA2AP08913 450 aa6.79□□□□□ -1.32
MAP1LC3B-205ENST00000564638 RAB40ALP0C0E4 278 aa6.79□□□□□ -1.32
MAP1LC3B-205ENST00000564638 TSPAN19P0C672 248 aa6.79□□□□□ -1.32
MAP1LC3B-205ENST00000564638 ZGLP1P0C6A0 271 aa6.79□□□□□ -1.32
MAP1LC3B-205ENST00000564638 ZNF3P17036 446 aa6.79□□□□□ -1.32
MAP1LC3B-205ENST00000564638 TBXA2RP21731 343 aa6.79□□□□□ -1.32
MAP1LC3B-205ENST00000564638 PAICSP22234 425 aaKnown RBP6.79□□□□□ -1.32
MAP1LC3B-205ENST00000564638 PSMA1P25786 263 aaKnown RBP6.79□□□□□ -1.32
MAP1LC3B-205ENST00000564638 OTX2P32243 289 aa6.79□□□□□ -1.32
MAP1LC3B-205ENST00000564638 SOX6P35712 828 aa6.79□□□□□ -1.32
MAP1LC3B-205ENST00000564638 ATP6V1E1P36543 226 aa6.79□□□□□ -1.32
MAP1LC3B-205ENST00000564638 OPRL1P41146 370 aa6.79□□□□□ -1.32
MAP1LC3B-205ENST00000564638 SOX3P41225 446 aa6.79□□□□□ -1.32
MAP1LC3B-205ENST00000564638 FOLR3P41439 243 aa6.79□□□□□ -1.32
MAP1LC3B-205ENST00000564638 SLC9A3P48764 834 aa6.79□□□□□ -1.32
MAP1LC3B-205ENST00000564638 ETV1P50549 477 aa6.79□□□□□ -1.32
MAP1LC3B-205ENST00000564638 CCR4P51679 360 aa6.79□□□□□ -1.32
MAP1LC3B-205ENST00000564638 BMXP51813 675 aa6.79□□□□□ -1.32
MAP1LC3B-205ENST00000564638 CRYZQ08257 329 aaKnown RBP6.79□□□□□ -1.32
MAP1LC3B-205ENST00000564638 TMED1Q13445 227 aa6.79□□□□□ -1.32
MAP1LC3B-205ENST00000564638 NSDHLQ15738 373 aa6.79□□□□□ -1.32
MAP1LC3B-205ENST00000564638 SSX1Q16384 188 aa6.79□□□□□ -1.32
MAP1LC3B-205ENST00000564638 NDUFAF6Q330K2 333 aa6.79□□□□□ -1.32
MAP1LC3B-205ENST00000564638 ELOA3BQ3SY89 546 aa6.79□□□□□ -1.32
MAP1LC3B-205ENST00000564638 ZNF404Q494X3 552 aa6.79□□□□□ -1.32
MAP1LC3B-205ENST00000564638 KLHL26Q53HC5 615 aa6.79□□□□□ -1.32
MAP1LC3B-205ENST00000564638 AADACL4Q5VUY2 407 aa6.79□□□□□ -1.32
MAP1LC3B-205ENST00000564638 WBP2NLQ6ICG8 309 aa6.79□□□□□ -1.32
MAP1LC3B-205ENST00000564638 NIPAL3Q6P499 406 aa6.79□□□□□ -1.32
MAP1LC3B-205ENST00000564638 KIRREL2Q6UWL6 708 aa6.79□□□□□ -1.32
MAP1LC3B-205ENST00000564638 SHISA6Q6ZSJ9 500 aa6.79□□□□□ -1.32
MAP1LC3B-205ENST00000564638 COX15Q7KZN9 410 aa6.79□□□□□ -1.32
MAP1LC3B-205ENST00000564638 SLC29A4Q7RTT9 530 aa6.79□□□□□ -1.32
MAP1LC3B-205ENST00000564638 OAFQ86UD1 273 aa6.79□□□□□ -1.32
MAP1LC3B-205ENST00000564638 ATCAYQ86WG3 371 aa6.79□□□□□ -1.32
MAP1LC3B-205ENST00000564638 KLHL36Q8N4N3 616 aa6.79□□□□□ -1.32
MAP1LC3B-205ENST00000564638 SLC15A4Q8N697 577 aa6.79□□□□□ -1.32
MAP1LC3B-205ENST00000564638 PSD4Q8NDX1 1056 aa6.79□□□□□ -1.32
MAP1LC3B-205ENST00000564638 FAM71CQ8NEG0 241 aa6.79□□□□□ -1.32
MAP1LC3B-205ENST00000564638 ELOA3Q8NG57 546 aa6.79□□□□□ -1.32
MAP1LC3B-205ENST00000564638 OR6Q1Q8NGQ2 317 aa6.79□□□□□ -1.32
MAP1LC3B-205ENST00000564638 ZNF721Q8TF20 911 aa6.79□□□□□ -1.32
MAP1LC3B-205ENST00000564638 OTULINQ96BN8 352 aa6.79□□□□□ -1.32
MAP1LC3B-205ENST00000564638 SH3YL1Q96HL8 342 aaPredicted RBP6.79□□□□□ -1.32
MAP1LC3B-205ENST00000564638 ZNF426Q9BUY5 554 aa6.79□□□□□ -1.32
MAP1LC3B-205ENST00000564638 NUDT9Q9BW91 350 aa6.79□□□□□ -1.32
MAP1LC3B-205ENST00000564638 SLC19A3Q9BZV2 496 aa6.79□□□□□ -1.32
MAP1LC3B-205ENST00000564638 NDEL1Q9GZM8 345 aa6.79□□□□□ -1.32
MAP1LC3B-205ENST00000564638 VN1R1Q9GZP7 353 aa6.79□□□□□ -1.32
MAP1LC3B-205ENST00000564638 NXF5Q9H1B4 397 aaKnown RBP6.79□□□□□ -1.32
MAP1LC3B-205ENST00000564638 MMP27Q9H306 513 aa6.79□□□□□ -1.32
MAP1LC3B-205ENST00000564638 ISYNA1Q9NPH2 558 aa6.79□□□□□ -1.32
MAP1LC3B-205ENST00000564638 AKIP1Q9NQ31 210 aa6.79□□□□□ -1.32
MAP1LC3B-205ENST00000564638 HINT3Q9NQE9 182 aaKnown RBP6.79□□□□□ -1.32
MAP1LC3B-205ENST00000564638 EXOSC3Q9NQT5 275 aaKnown RBP6.79□□□□□ -1.32
MAP1LC3B-205ENST00000564638 UBQLN4Q9NRR5 601 aa6.79□□□□□ -1.32
MAP1LC3B-205ENST00000564638 SLC22A11Q9NSA0 550 aa6.79□□□□□ -1.32
MAP1LC3B-205ENST00000564638 NDUFB11Q9NX14 153 aa6.79□□□□□ -1.32
MAP1LC3B-205ENST00000564638 TNFRSF10DQ9UBN6 386 aa6.79□□□□□ -1.32
MAP1LC3B-205ENST00000564638 CTSFQ9UBX1 484 aa6.79□□□□□ -1.32
MAP1LC3B-205ENST00000564638 CLEC2DQ9UHP7 191 aa6.79□□□□□ -1.32
MAP1LC3B-205ENST00000564638 MKL2Q9ULH7 1088 aa6.79□□□□□ -1.32
MAP1LC3B-205ENST00000564638 STUB1Q9UNE7 303 aa6.79□□□□□ -1.32
MAP1LC3B-205ENST00000564638 SIGLEC7Q9Y286 467 aa6.79□□□□□ -1.32
MAP1LC3B-205ENST00000564638 B3GNT3Q9Y2A9 372 aa6.79□□□□□ -1.32
MAP1LC3B-205ENST00000564638 MED13Q9UHV7 2174 aa6.79□□□□□ -1.32
MAP1LC3B-205ENST00000564638 DNHD1Q96M86 4753 aa6.79□□□□□ -1.32
MAP1LC3B-205ENST00000564638 ITPR3Q14573 2671 aa6.78□□□□□ -1.32
MAP1LC3B-205ENST00000564638 LRRK2Q5S007 2527 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms