RNA–Protein interactions for RNA: ENST00000564272.1

SHCBP1-203, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 530 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-203ENST00000564272 OR7A5Q15622 319 aa17.64■□□□□ 0.41
SHCBP1-203ENST00000564272 ZSWIM7Q19AV6 140 aa17.64■□□□□ 0.41
SHCBP1-203ENST00000564272 FBXW9Q5XUX1 488 aa17.64■□□□□ 0.41
SHCBP1-203ENST00000564272 STON2Q8WXE9 905 aa17.64■□□□□ 0.41
SHCBP1-203ENST00000564272 C3orf49Q96BT1 292 aa17.64■□□□□ 0.41
SHCBP1-203ENST00000564272 NAA11Q9BSU3 229 aaPredicted RBP17.64■□□□□ 0.41
SHCBP1-203ENST00000564272 ZNF385DQ9H6B1 395 aa17.64■□□□□ 0.41
SHCBP1-203ENST00000564272 A0A1W2PP18 115 aa17.63■□□□□ 0.41
SHCBP1-203ENST00000564272 LIPT2A6NK58 231 aa17.63■□□□□ 0.41
SHCBP1-203ENST00000564272 EIF1BO60739 113 aaKnown RBP17.63■□□□□ 0.41
SHCBP1-203ENST00000564272 MRPL33O75394 65 aaKnown RBP17.63■□□□□ 0.41
SHCBP1-203ENST00000564272 AKR7A3O95154 331 aa17.63■□□□□ 0.41
SHCBP1-203ENST00000564272 CNOT4O95628 575 aaKnown RBP17.63■□□□□ 0.41
SHCBP1-203ENST00000564272 PPIBP23284 216 aaKnown RBP17.63■□□□□ 0.41
SHCBP1-203ENST00000564272 RIPPLY3P57055 190 aa17.63■□□□□ 0.41
SHCBP1-203ENST00000564272 IRX1P78414 480 aaPredicted RBP17.63■□□□□ 0.41
SHCBP1-203ENST00000564272 CDK6Q00534 326 aa17.63■□□□□ 0.41
SHCBP1-203ENST00000564272 NCMAPQ5T1S8 102 aa17.63■□□□□ 0.41
SHCBP1-203ENST00000564272 OTUD3Q5T2D3 398 aaPredicted RBP17.63■□□□□ 0.41
SHCBP1-203ENST00000564272 PAQR6Q6TCH4 344 aa17.63■□□□□ 0.41
SHCBP1-203ENST00000564272 CASP12Q6UXS9 341 aa17.63■□□□□ 0.41
SHCBP1-203ENST00000564272 DLEU7Q6UYE1 221 aa17.63■□□□□ 0.41
SHCBP1-203ENST00000564272 COMTD1Q86VU5 262 aa17.63■□□□□ 0.41
SHCBP1-203ENST00000564272 TMEM99Q8N816 258 aa17.63■□□□□ 0.41
SHCBP1-203ENST00000564272 CPPED1Q9BRF8 314 aaPredicted RBP17.63■□□□□ 0.41
SHCBP1-203ENST00000564272 RABEP2Q9H5N1 569 aa17.63■□□□□ 0.41
SHCBP1-203ENST00000564272 RNF115Q9Y4L5 304 aa17.63■□□□□ 0.41
SHCBP1-203ENST00000564272 FLVCR1Q9Y5Y0 555 aa17.63■□□□□ 0.41
SHCBP1-203ENST00000564272 ARID1AO14497 2285 aa17.63■□□□□ 0.41
SHCBP1-203ENST00000564272 A0A0G2JND7 137 aa17.62■□□□□ 0.41
SHCBP1-203ENST00000564272 A8MVM7 634 aa17.62■□□□□ 0.41
SHCBP1-203ENST00000564272 TMEM229AB2RXF0 380 aa17.62■□□□□ 0.41
SHCBP1-203ENST00000564272 HS3ST1O14792 307 aa17.62■□□□□ 0.41
SHCBP1-203ENST00000564272 CLOCKO15516 846 aa17.62■□□□□ 0.41
SHCBP1-203ENST00000564272 RAD51DO75771 328 aa17.62■□□□□ 0.41
SHCBP1-203ENST00000564272 GPIP06744 558 aa17.62■□□□□ 0.41
SHCBP1-203ENST00000564272 ETS2P15036 469 aa17.62■□□□□ 0.41
SHCBP1-203ENST00000564272 GGT1P19440 569 aa17.62■□□□□ 0.41
SHCBP1-203ENST00000564272 SLC17A1Q14916 467 aa17.62■□□□□ 0.41
SHCBP1-203ENST00000564272 Q5PR19 223 aa17.62■□□□□ 0.41
SHCBP1-203ENST00000564272 REEP3Q6NUK4 255 aa17.62■□□□□ 0.41
SHCBP1-203ENST00000564272 P3H2Q8IVL5 708 aa17.62■□□□□ 0.41
SHCBP1-203ENST00000564272 ZNF433Q8N7K0 673 aaPredicted RBP17.62■□□□□ 0.41
SHCBP1-203ENST00000564272 AKAP1Q92667 903 aaKnown RBP eCLIP17.62■□□□□ 0.41
SHCBP1-203ENST00000564272 PERPQ96FX8 193 aa17.62■□□□□ 0.41
SHCBP1-203ENST00000564272 USB1Q9BQ65 265 aaKnown RBP17.62■□□□□ 0.41
SHCBP1-203ENST00000564272 LEF1Q9UJU2 399 aaPredicted RBP17.62■□□□□ 0.41
SHCBP1-203ENST00000564272 SLC9A8Q9Y2E8 581 aa17.62■□□□□ 0.41
SHCBP1-203ENST00000564272 GMEB1Q9Y692 573 aa17.62■□□□□ 0.41
SHCBP1-203ENST00000564272 VPS13CQ709C8 3753 aa17.61■□□□□ 0.41
SHCBP1-203ENST00000564272 CD3EP07766 207 aa17.61■□□□□ 0.41
SHCBP1-203ENST00000564272 GPX2P18283 190 aa17.61■□□□□ 0.41
SHCBP1-203ENST00000564272 AQP1P29972 269 aa17.61■□□□□ 0.41
SHCBP1-203ENST00000564272 PRKAR1BP31321 381 aa17.61■□□□□ 0.41
SHCBP1-203ENST00000564272 FOXG1P55316 489 aaPredicted RBP17.61■□□□□ 0.41
SHCBP1-203ENST00000564272 BSPH1Q075Z2 132 aa17.61■□□□□ 0.41
SHCBP1-203ENST00000564272 FAPQ12884 760 aa17.61■□□□□ 0.41
SHCBP1-203ENST00000564272 SCARB2Q14108 478 aa17.61■□□□□ 0.41
SHCBP1-203ENST00000564272 PPA1Q15181 289 aa17.61■□□□□ 0.41
SHCBP1-203ENST00000564272 ADRM1Q16186 407 aa17.61■□□□□ 0.41
SHCBP1-203ENST00000564272 C1orf140Q5VVS0 124 aa17.61■□□□□ 0.41
SHCBP1-203ENST00000564272 SHEQ5VZ18 495 aa17.61■□□□□ 0.41
SHCBP1-203ENST00000564272 DHDDSQ86SQ9 333 aa17.61■□□□□ 0.41
SHCBP1-203ENST00000564272 RETREG3Q86VR2 466 aa17.61■□□□□ 0.41
SHCBP1-203ENST00000564272 LRRC75A-AS1Q8N1F1 130 aa17.61■□□□□ 0.41
SHCBP1-203ENST00000564272 OR52E4Q8NGH9 312 aa17.61■□□□□ 0.41
SHCBP1-203ENST00000564272 LILRB1Q8NHL6 650 aaPredicted RBP17.61■□□□□ 0.41
SHCBP1-203ENST00000564272 IGFBPL1Q8WX77 278 aa17.61■□□□□ 0.41
SHCBP1-203ENST00000564272 ESRP2Q9H6T0 727 aaKnown RBP17.61■□□□□ 0.41
SHCBP1-203ENST00000564272 NGBQ9NPG2 151 aa17.61■□□□□ 0.41
SHCBP1-203ENST00000564272 ADPRHL2Q9NX46 363 aa17.61■□□□□ 0.41
SHCBP1-203ENST00000564272 MALT1Q9UDY8 824 aa17.61■□□□□ 0.41
SHCBP1-203ENST00000564272 PRDM4Q9UKN5 801 aa17.61■□□□□ 0.41
SHCBP1-203ENST00000564272 TRIM33Q9UPN9 1127 aa17.61■□□□□ 0.41
SHCBP1-203ENST00000564272 CORO2BQ9UQ03 480 aa17.61■□□□□ 0.41
SHCBP1-203ENST00000564272 DPRXA6NFQ7 191 aa17.6■□□□□ 0.41
SHCBP1-203ENST00000564272 AQP7P3A6NL99 342 aa17.6■□□□□ 0.41
SHCBP1-203ENST00000564272 EVPLLA8MZ36 301 aa17.6■□□□□ 0.41
SHCBP1-203ENST00000564272 TPST1O60507 370 aa17.6■□□□□ 0.41
SHCBP1-203ENST00000564272 HTR2AP28223 471 aa17.6■□□□□ 0.41
SHCBP1-203ENST00000564272 SELPLGQ14242 412 aa17.6■□□□□ 0.41
SHCBP1-203ENST00000564272 GLIPR1L2Q4G1C9 344 aa17.6■□□□□ 0.41
SHCBP1-203ENST00000564272 RUNDC3AQ59EK9 446 aa17.6■□□□□ 0.41
SHCBP1-203ENST00000564272 TIMM23BQ5SRD1 257 aa17.6■□□□□ 0.41
SHCBP1-203ENST00000564272 DHRS4L2Q6PKH6 230 aa17.6■□□□□ 0.41
SHCBP1-203ENST00000564272 KRT73Q86Y46 540 aa17.6■□□□□ 0.41
SHCBP1-203ENST00000564272 ZNF611Q8N823 705 aa17.6■□□□□ 0.41
SHCBP1-203ENST00000564272 KBTBD8Q8NFY9 601 aa17.6■□□□□ 0.41
SHCBP1-203ENST00000564272 OR9K2Q8NGE7 335 aa17.6■□□□□ 0.41
SHCBP1-203ENST00000564272 NEUROG1Q92886 237 aa17.6■□□□□ 0.41
SHCBP1-203ENST00000564272 SLC35B4Q969S0 331 aa17.6■□□□□ 0.41
SHCBP1-203ENST00000564272 TAPBPLQ9BX59 468 aa17.6■□□□□ 0.41
SHCBP1-203ENST00000564272 TMEM38AQ9H6F2 299 aa17.6■□□□□ 0.41
SHCBP1-203ENST00000564272 ASB6Q9NWX5 421 aa17.6■□□□□ 0.41
SHCBP1-203ENST00000564272 NPAP1Q9NZP6 1156 aa17.6■□□□□ 0.41
SHCBP1-203ENST00000564272 NDUFAF1Q9Y375 327 aa17.6■□□□□ 0.41
SHCBP1-203ENST00000564272 SETD2Q9BYW2 2564 aaPredicted RBP17.59■□□□□ 0.41
SHCBP1-203ENST00000564272 A0A1W2PR80 420 aa17.59■□□□□ 0.41
SHCBP1-203ENST00000564272 CIB4A0PJX0 185 aa17.59■□□□□ 0.41
SHCBP1-203ENST00000564272 OR5H1A6NKK0 313 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms