RNA–Protein interactions for RNA: ENST00000563759.1

LINC01960-201, Transcript of long intergenic non-protein coding RNA 1960, humanhuman

BASIC

Gene LINC01960, Length 1,884 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01960-201ENST00000563759 TOMM20Q15388 145 aa19.86■□□□□ 0.77
LINC01960-201ENST00000563759 ZNF800Q2TB10 664 aaPredicted RBP eCLIP19.86■□□□□ 0.77
LINC01960-201ENST00000563759 FAM69AQ5T7M9 428 aa19.86■□□□□ 0.77
LINC01960-201ENST00000563759 LAIR2Q6ISS4 152 aa19.86■□□□□ 0.77
LINC01960-201ENST00000563759 C3orf33Q6P1S2 294 aa19.86■□□□□ 0.77
LINC01960-201ENST00000563759 THSD4Q6ZMP0 1018 aa19.86■□□□□ 0.77
LINC01960-201ENST00000563759 CCDC103Q8IW40 242 aa19.86■□□□□ 0.77
LINC01960-201ENST00000563759 ATP6V1C2Q8NEY4 427 aa19.86■□□□□ 0.77
LINC01960-201ENST00000563759 OR8J1Q8NGP2 316 aa19.86■□□□□ 0.77
LINC01960-201ENST00000563759 OR5M1Q8NGP8 315 aa19.86■□□□□ 0.77
LINC01960-201ENST00000563759 POC1BQ8TC44 478 aa19.86■□□□□ 0.77
LINC01960-201ENST00000563759 DDIT4LQ96D03 193 aa19.86■□□□□ 0.77
LINC01960-201ENST00000563759 IL4I1Q96RQ9 567 aa19.86■□□□□ 0.77
LINC01960-201ENST00000563759 UBQLN3Q9H347 655 aa19.86■□□□□ 0.77
LINC01960-201ENST00000563759 SERINC1Q9NRX5 453 aa19.86■□□□□ 0.77
LINC01960-201ENST00000563759 BOKQ9UMX3 212 aaPredicted RBP19.86■□□□□ 0.77
LINC01960-201ENST00000563759 RPH3AQ9Y2J0 694 aaPredicted RBP19.86■□□□□ 0.77
LINC01960-201ENST00000563759 LOC400499M0QZD8 3231 aa19.85■□□□□ 0.77
LINC01960-201ENST00000563759 CDK2AP1O14519 115 aa19.85■□□□□ 0.77
LINC01960-201ENST00000563759 NPIPB7O75200 414 aa19.85■□□□□ 0.77
LINC01960-201ENST00000563759 PTP4A3O75365 173 aa19.85■□□□□ 0.77
LINC01960-201ENST00000563759 WBP4O75554 376 aaKnown RBP19.85■□□□□ 0.77
LINC01960-201ENST00000563759 EEF1B2P24534 225 aaKnown RBP19.85■□□□□ 0.77
LINC01960-201ENST00000563759 SLC6A6P31641 620 aa19.85■□□□□ 0.77
LINC01960-201ENST00000563759 MAP2K6P52564 334 aa19.85■□□□□ 0.77
LINC01960-201ENST00000563759 TOP3AQ13472 1001 aaPredicted RBP19.85■□□□□ 0.77
LINC01960-201ENST00000563759 SNAPC1Q16533 368 aa19.85■□□□□ 0.77
LINC01960-201ENST00000563759 SMN1Q16637 294 aaKnown RBP19.85■□□□□ 0.77
LINC01960-201ENST00000563759 GXYLT1Q4G148 440 aa19.85■□□□□ 0.77
LINC01960-201ENST00000563759 C1QL3Q5VWW1 255 aa19.85■□□□□ 0.77
LINC01960-201ENST00000563759 NANOGNBQ7Z5D8 188 aa19.85■□□□□ 0.77
LINC01960-201ENST00000563759 TCEANCQ8N8B7 351 aa19.85■□□□□ 0.77
LINC01960-201ENST00000563759 SNIP1Q8TAD8 396 aaKnown RBP19.85■□□□□ 0.77
LINC01960-201ENST00000563759 RELTQ969Z4 430 aa19.85■□□□□ 0.77
LINC01960-201ENST00000563759 PLEKHA8Q96JA3 519 aa19.85■□□□□ 0.77
LINC01960-201ENST00000563759 FAM173AQ9BQD7 235 aa19.85■□□□□ 0.77
LINC01960-201ENST00000563759 ZNF552Q9H707 407 aaPredicted RBP19.85■□□□□ 0.77
LINC01960-201ENST00000563759 FKRPQ9H9S5 495 aa19.85■□□□□ 0.77
LINC01960-201ENST00000563759 ZNF229Q9UJW7 825 aa19.85■□□□□ 0.77
LINC01960-201ENST00000563759 SPIN1Q9Y657 262 aaPredicted RBP19.85■□□□□ 0.77
LINC01960-201ENST00000563759 CFAP47Q6ZTR5 3102 aa19.85■□□□□ 0.77
LINC01960-201ENST00000563759 H3BML4 177 aa19.84■□□□□ 0.77
LINC01960-201ENST00000563759 ZNF208O43345 1280 aa19.84■□□□□ 0.77
LINC01960-201ENST00000563759 NDUFB2O95178 105 aa19.84■□□□□ 0.77
LINC01960-201ENST00000563759 HIST1H2ABP04908 130 aa19.84■□□□□ 0.77
LINC01960-201ENST00000563759 TFPIP10646 304 aa19.84■□□□□ 0.77
LINC01960-201ENST00000563759 GABRB1P18505 474 aa19.84■□□□□ 0.77
LINC01960-201ENST00000563759 CRHBPP24387 322 aa19.84■□□□□ 0.77
LINC01960-201ENST00000563759 ADH6P28332 368 aa19.84■□□□□ 0.77
LINC01960-201ENST00000563759 ARG2P78540 354 aa19.84■□□□□ 0.77
LINC01960-201ENST00000563759 HIST3H2AQ7L7L0 130 aa19.84■□□□□ 0.77
LINC01960-201ENST00000563759 SLC43A2Q8N370 569 aa19.84■□□□□ 0.77
LINC01960-201ENST00000563759 FDCSPQ8NFU4 85 aa19.84■□□□□ 0.77
LINC01960-201ENST00000563759 TSPAN14Q8NG11 270 aa19.84■□□□□ 0.77
LINC01960-201ENST00000563759 TRUB1Q8WWH5 349 aaKnown RBP19.84■□□□□ 0.77
LINC01960-201ENST00000563759 LIPHQ8WWY8 451 aa19.84■□□□□ 0.77
LINC01960-201ENST00000563759 HIST1H2ACQ93077 130 aa19.84■□□□□ 0.77
LINC01960-201ENST00000563759 SLC25A36Q96CQ1 311 aa19.84■□□□□ 0.77
LINC01960-201ENST00000563759 PTDSS2Q9BVG9 487 aa19.84■□□□□ 0.77
LINC01960-201ENST00000563759 POLDIP3Q9BY77 421 aaKnown RBP19.84■□□□□ 0.77
LINC01960-201ENST00000563759 KLHL1Q9NR64 748 aa19.84■□□□□ 0.77
LINC01960-201ENST00000563759 TUBA8Q9NY65 449 aaPredicted RBP19.84■□□□□ 0.77
LINC01960-201ENST00000563759 LRRC3CA6NJW4 275 aa19.84■□□□□ 0.77
LINC01960-201ENST00000563759 EFSO43281 561 aa19.84■□□□□ 0.77
LINC01960-201ENST00000563759 XPNPEP2O43895 674 aa19.84■□□□□ 0.77
LINC01960-201ENST00000563759 PRKYO43930 277 aa19.84■□□□□ 0.77
LINC01960-201ENST00000563759 MT-ATP6P00846 226 aa19.84■□□□□ 0.77
LINC01960-201ENST00000563759 BGLAPP02818 100 aa19.84■□□□□ 0.77
LINC01960-201ENST00000563759 CCDC159P0C7I6 412 aa19.84■□□□□ 0.77
LINC01960-201ENST00000563759 MLLT10P55197 1068 aa19.84■□□□□ 0.77
LINC01960-201ENST00000563759 PRPS1P60891 318 aa19.84■□□□□ 0.77
LINC01960-201ENST00000563759 RPS4XP62701 263 aaKnown RBP19.84■□□□□ 0.77
LINC01960-201ENST00000563759 SELENBP1Q13228 472 aa19.84■□□□□ 0.77
LINC01960-201ENST00000563759 FHL1Q13642 323 aa19.84■□□□□ 0.77
LINC01960-201ENST00000563759 RAET1LQ5VY80 246 aa19.84■□□□□ 0.77
LINC01960-201ENST00000563759 ZNF566Q969W8 418 aa19.84■□□□□ 0.77
LINC01960-201ENST00000563759 HES7Q9BYE0 225 aa19.84■□□□□ 0.77
LINC01960-201ENST00000563759 RNF32Q9H0A6 362 aa19.84■□□□□ 0.77
LINC01960-201ENST00000563759 ENKD1Q9H0I2 346 aa19.84■□□□□ 0.77
LINC01960-201ENST00000563759 BLOC1S5-TXNDC5H3BN57 136 aa19.83■□□□□ 0.76
LINC01960-201ENST00000563759 BHLHE40O14503 412 aa19.83■□□□□ 0.76
LINC01960-201ENST00000563759 OR2T1O43869 369 aa19.83■□□□□ 0.76
LINC01960-201ENST00000563759 FAM20BO75063 409 aa19.83■□□□□ 0.76
LINC01960-201ENST00000563759 ASAH2BP0C7U1 165 aa19.83■□□□□ 0.76
LINC01960-201ENST00000563759 PEPDP12955 493 aa19.83■□□□□ 0.76
LINC01960-201ENST00000563759 ATP6V1B1P15313 513 aa19.83■□□□□ 0.76
LINC01960-201ENST00000563759 IL11P20809 199 aa19.83■□□□□ 0.76
LINC01960-201ENST00000563759 RPL4P36578 427 aaKnown RBP19.83■□□□□ 0.76
LINC01960-201ENST00000563759 CXCR4P61073 352 aa19.83■□□□□ 0.76
LINC01960-201ENST00000563759 SNRPGP62308 76 aaKnown RBP19.83■□□□□ 0.76
LINC01960-201ENST00000563759 FOXK1P85037 733 aa19.83■□□□□ 0.76
LINC01960-201ENST00000563759 TEKQ02763 1124 aa19.83■□□□□ 0.76
LINC01960-201ENST00000563759 LTBQ06643 244 aa19.83■□□□□ 0.76
LINC01960-201ENST00000563759 SYT14P1Q58G82 188 aa19.83■□□□□ 0.76
LINC01960-201ENST00000563759 SLC6A19Q695T7 634 aa19.83■□□□□ 0.76
LINC01960-201ENST00000563759 MAMDC2Q7Z304 686 aaPredicted RBP19.83■□□□□ 0.76
LINC01960-201ENST00000563759 GTPBP8Q8N3Z3 284 aaPredicted RBP19.83■□□□□ 0.76
LINC01960-201ENST00000563759 OR2M7Q8NG81 312 aa19.83■□□□□ 0.76
LINC01960-201ENST00000563759 C5orf34Q96MH7 638 aa19.83■□□□□ 0.76
LINC01960-201ENST00000563759 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP19.83■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms