RNA–Protein interactions for RNA: ENST00000563235.5

SMG1-207, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,910 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-207ENST00000563235 ADAM10O14672 748 aa4.33□□□□□ -1.72
SMG1-207ENST00000563235 POP7O75817 140 aaKnown RBP4.33□□□□□ -1.72
SMG1-207ENST00000563235 EFEMP2O95967 443 aa4.33□□□□□ -1.72
SMG1-207ENST00000563235 HIST1H2ABP04908 130 aa4.33□□□□□ -1.72
SMG1-207ENST00000563235 ZDHHC11BP0C7U3 371 aa4.33□□□□□ -1.72
SMG1-207ENST00000563235 IRF1P10914 325 aa4.33□□□□□ -1.72
SMG1-207ENST00000563235 HIST1H2ADP20671 130 aa4.33□□□□□ -1.72
SMG1-207ENST00000563235 HSPA9P38646 679 aaKnown RBP4.33□□□□□ -1.72
SMG1-207ENST00000563235 GDNFP39905 211 aa4.33□□□□□ -1.72
SMG1-207ENST00000563235 RAB13P51153 203 aa4.33□□□□□ -1.72
SMG1-207ENST00000563235 PRKXP51817 358 aa4.33□□□□□ -1.72
SMG1-207ENST00000563235 RRADP55042 308 aa4.33□□□□□ -1.72
SMG1-207ENST00000563235 IL13RA1P78552 427 aa4.33□□□□□ -1.72
SMG1-207ENST00000563235 MRPS34P82930 218 aaKnown RBP4.33□□□□□ -1.72
SMG1-207ENST00000563235 GAGE1Q13065 139 aa4.33□□□□□ -1.72
SMG1-207ENST00000563235 CDH18Q13634 790 aa4.33□□□□□ -1.72
SMG1-207ENST00000563235 CTTNQ14247 550 aaKnown RBP4.33□□□□□ -1.72
SMG1-207ENST00000563235 GRB14Q14449 540 aa4.33□□□□□ -1.72
SMG1-207ENST00000563235 GANABQ14697 944 aaKnown RBP4.33□□□□□ -1.72
SMG1-207ENST00000563235 CCDC6Q16204 474 aa4.33□□□□□ -1.72
SMG1-207ENST00000563235 ACSM5Q6NUN0 579 aa4.33□□□□□ -1.72
SMG1-207ENST00000563235 HIST3H2AQ7L7L0 130 aa4.33□□□□□ -1.72
SMG1-207ENST00000563235 ZNF761Q86XN6 746 aaPredicted RBP4.33□□□□□ -1.72
SMG1-207ENST00000563235 CCDC71Q8IV32 467 aaPredicted RBP4.33□□□□□ -1.72
SMG1-207ENST00000563235 ZNF611Q8N823 705 aa4.33□□□□□ -1.72
SMG1-207ENST00000563235 LINC00116Q8NCU8 138 aa4.33□□□□□ -1.72
SMG1-207ENST00000563235 YIPF6Q96EC8 236 aa4.33□□□□□ -1.72
SMG1-207ENST00000563235 LIN37Q96GY3 246 aaPredicted RBP4.33□□□□□ -1.72
SMG1-207ENST00000563235 FYTTD1Q96QD9 318 aaKnown RBP4.33□□□□□ -1.72
SMG1-207ENST00000563235 IL25Q9H293 177 aa4.33□□□□□ -1.72
SMG1-207ENST00000563235 ZDHHC6Q9H6R6 413 aa4.33□□□□□ -1.72
SMG1-207ENST00000563235 SAP30LQ9HAJ7 183 aa4.33□□□□□ -1.72
SMG1-207ENST00000563235 GDF3Q9NR23 364 aa4.33□□□□□ -1.72
SMG1-207ENST00000563235 BABAM2Q9NXR7 383 aa4.33□□□□□ -1.72
SMG1-207ENST00000563235 TAS2R1Q9NYW7 299 aa4.33□□□□□ -1.72
SMG1-207ENST00000563235 TMEM9Q9P0T7 183 aa4.33□□□□□ -1.72
SMG1-207ENST00000563235 MOKQ9UQ07 419 aa4.33□□□□□ -1.72
SMG1-207ENST00000563235 B3GALT5Q9Y2C3 310 aa4.33□□□□□ -1.72
SMG1-207ENST00000563235 TCAF1Q9Y4C2 921 aa4.33□□□□□ -1.72
SMG1-207ENST00000563235 TECPR2O15040 1411 aa4.33□□□□□ -1.72
SMG1-207ENST00000563235 ARFGEF1Q9Y6D6 1849 aa4.32□□□□□ -1.72
SMG1-207ENST00000563235 PVALEFA0A1B0GWK0 134 aa4.32□□□□□ -1.72
SMG1-207ENST00000563235 ANTXRLA6NF34 631 aa4.32□□□□□ -1.72
SMG1-207ENST00000563235 LRRC3CA6NJW4 275 aa4.32□□□□□ -1.72
SMG1-207ENST00000563235 G3V3Y1 287 aa4.32□□□□□ -1.72
SMG1-207ENST00000563235 DFFAO00273 331 aa4.32□□□□□ -1.72
SMG1-207ENST00000563235 INPP4BO15327 924 aa4.32□□□□□ -1.72
SMG1-207ENST00000563235 SGCEO43556 437 aa4.32□□□□□ -1.72
SMG1-207ENST00000563235 LDB3O75112 727 aa4.32□□□□□ -1.72
SMG1-207ENST00000563235 TTC4O95801 387 aa4.32□□□□□ -1.72
SMG1-207ENST00000563235 ANGPTL1O95841 491 aa4.32□□□□□ -1.72
SMG1-207ENST00000563235 GH2P01242 217 aa4.32□□□□□ -1.72
SMG1-207ENST00000563235 P04436 131 aa4.32□□□□□ -1.72
SMG1-207ENST00000563235 TMEM225BP0DP42 221 aa4.32□□□□□ -1.72
SMG1-207ENST00000563235 LHCGRP22888 699 aa4.32□□□□□ -1.72
SMG1-207ENST00000563235 GMPRP36959 345 aa4.32□□□□□ -1.72
SMG1-207ENST00000563235 RPL5P46777 297 aaKnown RBP4.32□□□□□ -1.72
SMG1-207ENST00000563235 KLRC3Q07444 240 aa4.32□□□□□ -1.72
SMG1-207ENST00000563235 APOFQ13790 326 aa4.32□□□□□ -1.72
SMG1-207ENST00000563235 KPNB1Q14974 876 aaKnown RBP4.32□□□□□ -1.72
SMG1-207ENST00000563235 RFX4Q33E94 735 aa4.32□□□□□ -1.72
SMG1-207ENST00000563235 DCAF4L1Q3SXM0 396 aa4.32□□□□□ -1.72
SMG1-207ENST00000563235 ACSM3Q53FZ2 586 aa4.32□□□□□ -1.72
SMG1-207ENST00000563235 SPIN3Q5JUX0 258 aa4.32□□□□□ -1.72
SMG1-207ENST00000563235 TSTD2Q5T7W7 516 aa4.32□□□□□ -1.72
SMG1-207ENST00000563235 LYPLAL1Q5VWZ2 237 aa4.32□□□□□ -1.72
SMG1-207ENST00000563235 DOK6Q6PKX4 331 aa4.32□□□□□ -1.72
SMG1-207ENST00000563235 Q6ZNX1 250 aa4.32□□□□□ -1.72
SMG1-207ENST00000563235 TMPRSS11BQ86T26 416 aa4.32□□□□□ -1.72
SMG1-207ENST00000563235 FAM98AQ8NCA5 519 aaKnown RBP4.32□□□□□ -1.72
SMG1-207ENST00000563235 SEMA6DQ8NFY4 1073 aa4.32□□□□□ -1.72
SMG1-207ENST00000563235 OR4D5Q8NGN0 318 aa4.32□□□□□ -1.72
SMG1-207ENST00000563235 LYPD6BQ8NI32 183 aa4.32□□□□□ -1.72
SMG1-207ENST00000563235 ANKRD9Q96BM1 317 aaPredicted RBP4.32□□□□□ -1.72
SMG1-207ENST00000563235 LAT2Q9GZY6 243 aa4.32□□□□□ -1.72
SMG1-207ENST00000563235 KAT8Q9H7Z6 458 aaKnown RBP4.32□□□□□ -1.72
SMG1-207ENST00000563235 BPIFA1Q9NP55 256 aa4.32□□□□□ -1.72
SMG1-207ENST00000563235 GPR173Q9NS66 373 aa4.32□□□□□ -1.72
SMG1-207ENST00000563235 DCAF13Q9NV06 445 aaKnown RBP4.32□□□□□ -1.72
SMG1-207ENST00000563235 ZNF490Q9ULM2 529 aaPredicted RBP4.32□□□□□ -1.72
SMG1-207ENST00000563235 CTNND2Q9UQB3 1225 aa4.32□□□□□ -1.72
SMG1-207ENST00000563235 POLDIP2Q9Y2S7 368 aa4.32□□□□□ -1.72
SMG1-207ENST00000563235 ZNF337Q9Y3M9 751 aa4.32□□□□□ -1.72
SMG1-207ENST00000563235 COL18A1P39060 1754 aa4.32□□□□□ -1.72
SMG1-207ENST00000563235 HSPB2A8KAH6 182 aa4.32□□□□□ -1.72
SMG1-207ENST00000563235 CHST1O43916 411 aa4.32□□□□□ -1.72
SMG1-207ENST00000563235 MFAP3LO75121 409 aa4.32□□□□□ -1.72
SMG1-207ENST00000563235 CDK1P06493 297 aa4.32□□□□□ -1.72
SMG1-207ENST00000563235 IFI30P13284 250 aa4.32□□□□□ -1.72
SMG1-207ENST00000563235 F8A1P23610 371 aa4.32□□□□□ -1.72
SMG1-207ENST00000563235 RFX3P48380 749 aa4.32□□□□□ -1.72
SMG1-207ENST00000563235 ACOT2P49753 483 aa4.32□□□□□ -1.72
SMG1-207ENST00000563235 LBX1P52954 281 aa4.32□□□□□ -1.72
SMG1-207ENST00000563235 ERVK-8P63133 956 aa4.32□□□□□ -1.72
SMG1-207ENST00000563235 SRSF6Q13247 344 aaKnown RBP4.32□□□□□ -1.72
SMG1-207ENST00000563235 DNASE1L3Q13609 305 aa4.32□□□□□ -1.72
SMG1-207ENST00000563235 SF3A2Q15428 464 aaKnown RBP4.32□□□□□ -1.72
SMG1-207ENST00000563235 HSPB2Q16082 182 aa4.32□□□□□ -1.72
SMG1-207ENST00000563235 SFT2D3Q587I9 215 aa4.32□□□□□ -1.72
SMG1-207ENST00000563235 ARL13AQ5H913 290 aaPredicted RBP4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms