RNA–Protein interactions for RNA: ENST00000562791.1

CHD9-206, Transcript of chromodomain helicase DNA binding protein 9, human

TSL 3

Gene CHD9, Length 242 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHD9-206	ENST00000562791	PSMG2	Q969U7	264 aa		4.12	□□□□□ -1.75
CHD9-206	ENST00000562791	RASD2	Q96D21	266 aa		4.12	□□□□□ -1.75
CHD9-206	ENST00000562791	NARS2	Q96I59	477 aa	Known RBP	4.12	□□□□□ -1.75
CHD9-206	ENST00000562791	HYLS1	Q96M11	299 aa		4.12	□□□□□ -1.75
CHD9-206	ENST00000562791	C12orf66	Q96MD2	445 aa		4.12	□□□□□ -1.75
CHD9-206	ENST00000562791	GCNA	Q96QF7	691 aa		4.12	□□□□□ -1.75
CHD9-206	ENST00000562791	F2RL3	Q96RI0	385 aa		4.12	□□□□□ -1.75
CHD9-206	ENST00000562791	TTYH2	Q9BSA4	534 aa		4.12	□□□□□ -1.75
CHD9-206	ENST00000562791	DDA1	Q9BW61	102 aa		4.12	□□□□□ -1.75
CHD9-206	ENST00000562791	C1QTNF1	Q9BXJ1	281 aa		4.12	□□□□□ -1.75
CHD9-206	ENST00000562791	ANKRD60	Q9BZ19	345 aa		4.12	□□□□□ -1.75
CHD9-206	ENST00000562791	PCBD2	Q9H0N5	130 aa		4.12	□□□□□ -1.75
CHD9-206	ENST00000562791	POLR3F	Q9H1D9	316 aa	Predicted RBP	4.12	□□□□□ -1.75
CHD9-206	ENST00000562791	SLC25A18	Q9H1K4	315 aa		4.12	□□□□□ -1.75
CHD9-206	ENST00000562791	NHEJ1	Q9H9Q4	299 aa	Predicted RBP	4.12	□□□□□ -1.75
CHD9-206	ENST00000562791	EIF2B3	Q9NR50	452 aa	Known RBP	4.12	□□□□□ -1.75
CHD9-206	ENST00000562791	ZCCHC3	Q9NUD5	404 aa	Known RBP	4.12	□□□□□ -1.75
CHD9-206	ENST00000562791	FAM49B	Q9NUQ9	324 aa		4.12	□□□□□ -1.75
CHD9-206	ENST00000562791	GTSE1	Q9NYZ3	720 aa		4.12	□□□□□ -1.75
CHD9-206	ENST00000562791	SMPX	Q9UHP9	88 aa		4.12	□□□□□ -1.75
CHD9-206	ENST00000562791	ZNF639	Q9UID6	485 aa		4.12	□□□□□ -1.75
CHD9-206	ENST00000562791	OR52A1	Q9UKL2	312 aa		4.12	□□□□□ -1.75
CHD9-206	ENST00000562791	CCL27	Q9Y4X3	112 aa		4.12	□□□□□ -1.75
CHD9-206	ENST00000562791	PEX16	Q9Y5Y5	336 aa		4.12	□□□□□ -1.75
CHD9-206	ENST00000562791		U3KQ87	197 aa		4.12	□□□□□ -1.75
CHD9-206	ENST00000562791	USP42	Q9H9J4	1324 aa	Known RBP	4.12	□□□□□ -1.75
CHD9-206	ENST00000562791	HEG1	Q9ULI3	1381 aa		4.12	□□□□□ -1.75
CHD9-206	ENST00000562791	MYH4	Q9Y623	1939 aa		4.11	□□□□□ -1.75
CHD9-206	ENST00000562791	CAMSAP1	Q5T5Y3	1602 aa		4.11	□□□□□ -1.75
CHD9-206	ENST00000562791	PREX2	Q70Z35	1606 aa		4.11	□□□□□ -1.75
CHD9-206	ENST00000562791	WIZ	O95785	1651 aa		4.11	□□□□□ -1.75
CHD9-206	ENST00000562791	IQGAP1	P46940	1657 aa		4.11	□□□□□ -1.75
CHD9-206	ENST00000562791	ZC3H13	Q5T200	1668 aa	Known RBP	4.11	□□□□□ -1.75
CHD9-206	ENST00000562791	ERI2	A8K979	691 aa	Known RBP	4.11	□□□□□ -1.75
CHD9-206	ENST00000562791	MAGEB17	A8MXT2	336 aa		4.11	□□□□□ -1.75
CHD9-206	ENST00000562791	TSTD3	H0UI37	97 aa		4.11	□□□□□ -1.75
CHD9-206	ENST00000562791	SIGLEC5	O15389	551 aa		4.11	□□□□□ -1.75
CHD9-206	ENST00000562791	CFLAR	O15519	480 aa		4.11	□□□□□ -1.75
CHD9-206	ENST00000562791	OR10H3	O60404	316 aa		4.11	□□□□□ -1.75
CHD9-206	ENST00000562791	PIAS1	O75925	651 aa		4.11	□□□□□ -1.75
CHD9-206	ENST00000562791	SEC14L2	O76054	403 aa		4.11	□□□□□ -1.75
CHD9-206	ENST00000562791	AKR7A3	O95154	331 aa		4.11	□□□□□ -1.75
CHD9-206	ENST00000562791	PDGFB	P01127	241 aa	Predicted RBP	4.11	□□□□□ -1.75
CHD9-206	ENST00000562791	PIGR	P01833	764 aa		4.11	□□□□□ -1.75
CHD9-206	ENST00000562791	C9	P02748	559 aa		4.11	□□□□□ -1.75
CHD9-206	ENST00000562791	MT-ND2	P03891	347 aa		4.11	□□□□□ -1.75
CHD9-206	ENST00000562791	CLEC3B	P05452	202 aa		4.11	□□□□□ -1.75
CHD9-206	ENST00000562791	PATE4	P0C8F1	98 aa		4.11	□□□□□ -1.75
CHD9-206	ENST00000562791	ZNF883	P0CG24	379 aa		4.11	□□□□□ -1.75
CHD9-206	ENST00000562791	CSH1	P0DML2	217 aa		4.11	□□□□□ -1.75
CHD9-206	ENST00000562791	CSH2	P0DML3	217 aa		4.11	□□□□□ -1.75
CHD9-206	ENST00000562791	ADORA3	P0DMS8	318 aa		4.11	□□□□□ -1.75
CHD9-206	ENST00000562791	CCL2	P13500	99 aa		4.11	□□□□□ -1.75
CHD9-206	ENST00000562791	MYOG	P15173	224 aa		4.11	□□□□□ -1.75
CHD9-206	ENST00000562791	PFKFB1	P16118	471 aa		4.11	□□□□□ -1.75
CHD9-206	ENST00000562791	CNR1	P21554	472 aa		4.11	□□□□□ -1.75
CHD9-206	ENST00000562791	MSR1	P21757	451 aa		4.11	□□□□□ -1.75
CHD9-206	ENST00000562791	PSMA5	P28066	241 aa		4.11	□□□□□ -1.75
CHD9-206	ENST00000562791	DDT	P30046	118 aa		4.11	□□□□□ -1.75
CHD9-206	ENST00000562791	EPHX2	P34913	555 aa		4.11	□□□□□ -1.75
CHD9-206	ENST00000562791	ETV6	P41212	452 aa		4.11	□□□□□ -1.75
CHD9-206	ENST00000562791	GRIA1	P42261	906 aa		4.11	□□□□□ -1.75
CHD9-206	ENST00000562791	GABRA4	P48169	554 aa		4.11	□□□□□ -1.75
CHD9-206	ENST00000562791	XK	P51811	444 aa		4.11	□□□□□ -1.75
CHD9-206	ENST00000562791	TAS2R38	P59533	333 aa		4.11	□□□□□ -1.75
CHD9-206	ENST00000562791	UBE2G2	P60604	165 aa		4.11	□□□□□ -1.75
CHD9-206	ENST00000562791	RAB2A	P61019	212 aa		4.11	□□□□□ -1.75
CHD9-206	ENST00000562791	RAB5B	P61020	215 aa		4.11	□□□□□ -1.75
CHD9-206	ENST00000562791	CSNK2A1	P68400	391 aa	Predicted RBP	4.11	□□□□□ -1.75
CHD9-206	ENST00000562791	PTP4A2	Q12974	167 aa		4.11	□□□□□ -1.75
CHD9-206	ENST00000562791	PPIG	Q13427	754 aa	Known RBP eCLIP	4.11	□□□□□ -1.75
CHD9-206	ENST00000562791	FGFBP1	Q14512	234 aa		4.11	□□□□□ -1.75
CHD9-206	ENST00000562791	TMED2	Q15363	201 aa		4.11	□□□□□ -1.75
CHD9-206	ENST00000562791	TRAM1	Q15629	374 aa		4.11	□□□□□ -1.75
CHD9-206	ENST00000562791	CHI3L2	Q15782	390 aa		4.11	□□□□□ -1.75
CHD9-206	ENST00000562791	PSG3	Q16557	428 aa		4.11	□□□□□ -1.75
CHD9-206	ENST00000562791	TST	Q16762	297 aa	Known RBP	4.11	□□□□□ -1.75
CHD9-206	ENST00000562791	DGUOK	Q16854	277 aa		4.11	□□□□□ -1.75
CHD9-206	ENST00000562791	ZNF630	Q2M218	657 aa	Predicted RBP	4.11	□□□□□ -1.75
CHD9-206	ENST00000562791	BSX	Q3C1V8	233 aa		4.11	□□□□□ -1.75
CHD9-206	ENST00000562791	TMEM30B	Q3MIR4	351 aa		4.11	□□□□□ -1.75
CHD9-206	ENST00000562791	C14orf28	Q4W4Y0	310 aa		4.11	□□□□□ -1.75
CHD9-206	ENST00000562791	SBK1	Q52WX2	424 aa		4.11	□□□□□ -1.75
CHD9-206	ENST00000562791	MPPE1	Q53F39	396 aa		4.11	□□□□□ -1.75
CHD9-206	ENST00000562791	BEX5	Q5H9J7	111 aa		4.11	□□□□□ -1.75
CHD9-206	ENST00000562791	CELF3	Q5SZQ8	465 aa	Known RBP	4.11	□□□□□ -1.75
CHD9-206	ENST00000562791	AVPI1	Q5T686	147 aa		4.11	□□□□□ -1.75
CHD9-206	ENST00000562791	NKAIN2	Q5VXU1	208 aa		4.11	□□□□□ -1.75
CHD9-206	ENST00000562791	FRG2	Q64ET8	278 aa		4.11	□□□□□ -1.75
CHD9-206	ENST00000562791	ZNF470	Q6ECI4	717 aa		4.11	□□□□□ -1.75
CHD9-206	ENST00000562791	OR6B2	Q6IFH4	312 aa		4.11	□□□□□ -1.75
CHD9-206	ENST00000562791	LPCAT3	Q6P1A2	487 aa		4.11	□□□□□ -1.75
CHD9-206	ENST00000562791	ULK3	Q6PHR2	472 aa		4.11	□□□□□ -1.75
CHD9-206	ENST00000562791	TRAT1	Q6PIZ9	186 aa		4.11	□□□□□ -1.75
CHD9-206	ENST00000562791	AFTPH	Q6ULP2	937 aa		4.11	□□□□□ -1.75
CHD9-206	ENST00000562791	BTNL3	Q6UXE8	466 aa		4.11	□□□□□ -1.75
CHD9-206	ENST00000562791	EIF3M	Q7L2H7	374 aa	Known RBP	4.11	□□□□□ -1.75
CHD9-206	ENST00000562791	APTX	Q7Z2E3	356 aa	Known RBP	4.11	□□□□□ -1.75
CHD9-206	ENST00000562791	TIPARP	Q7Z3E1	657 aa	Known RBP	4.11	□□□□□ -1.75
CHD9-206	ENST00000562791	NRROS	Q86YC3	692 aa		4.11	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms