RNA–Protein interactions for RNA: ENST00000562039.1

NSMCE1-203, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 260 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-203ENST00000562039 C3orf49Q96BT1 292 aa8.37□□□□□ -1.07
NSMCE1-203ENST00000562039 ZNF385AQ96PM9 386 aaKnown RBP8.37□□□□□ -1.07
NSMCE1-203ENST00000562039 CPPED1Q9BRF8 314 aaPredicted RBP8.37□□□□□ -1.07
NSMCE1-203ENST00000562039 NAA11Q9BSU3 229 aaPredicted RBP8.37□□□□□ -1.07
NSMCE1-203ENST00000562039 ADAM19Q9H013 955 aa8.37□□□□□ -1.07
NSMCE1-203ENST00000562039 CXXC4Q9H2H0 198 aa8.37□□□□□ -1.07
NSMCE1-203ENST00000562039 RAD21L1Q9H4I0 556 aa8.37□□□□□ -1.07
NSMCE1-203ENST00000562039 RPS6KB2Q9UBS0 482 aa8.37□□□□□ -1.07
NSMCE1-203ENST00000562039 SEC14L4Q9UDX3 406 aa8.37□□□□□ -1.07
NSMCE1-203ENST00000562039 TRBV5-3A0A0A0MS03 114 aa8.36□□□□□ -1.07
NSMCE1-203ENST00000562039 DPRXA6NFQ7 191 aa8.36□□□□□ -1.07
NSMCE1-203ENST00000562039 LIPT2A6NK58 231 aa8.36□□□□□ -1.07
NSMCE1-203ENST00000562039 EVPLLA8MZ36 301 aa8.36□□□□□ -1.07
NSMCE1-203ENST00000562039 SMAD7O15105 426 aaKnown RBP8.36□□□□□ -1.07
NSMCE1-203ENST00000562039 ANGPT2O15123 496 aa8.36□□□□□ -1.07
NSMCE1-203ENST00000562039 MRPL33O75394 65 aaKnown RBP8.36□□□□□ -1.07
NSMCE1-203ENST00000562039 THBS1P07996 1170 aa8.36□□□□□ -1.07
NSMCE1-203ENST00000562039 VIMP08670 466 aaKnown RBP8.36□□□□□ -1.07
NSMCE1-203ENST00000562039 PPP3CBP16298 524 aa8.36□□□□□ -1.07
NSMCE1-203ENST00000562039 HTR2AP28223 471 aa8.36□□□□□ -1.07
NSMCE1-203ENST00000562039 RPS5P46782 204 aaKnown RBP8.36□□□□□ -1.07
NSMCE1-203ENST00000562039 MRPL19P49406 292 aaKnown RBP8.36□□□□□ -1.07
NSMCE1-203ENST00000562039 ATP4BP51164 291 aa8.36□□□□□ -1.07
NSMCE1-203ENST00000562039 IL1RL1Q01638 556 aa8.36□□□□□ -1.07
NSMCE1-203ENST00000562039 FADDQ13158 208 aa8.36□□□□□ -1.07
NSMCE1-203ENST00000562039 RUNDC3AQ59EK9 446 aa8.36□□□□□ -1.07
NSMCE1-203ENST00000562039 Q5PR19 223 aa8.36□□□□□ -1.07
NSMCE1-203ENST00000562039 TSPO2Q5TGU0 170 aa8.36□□□□□ -1.07
NSMCE1-203ENST00000562039 RNF220Q5VTB9 566 aa8.36□□□□□ -1.07
NSMCE1-203ENST00000562039 C1orf140Q5VVS0 124 aa8.36□□□□□ -1.07
NSMCE1-203ENST00000562039 AP1ARQ63HQ0 302 aa8.36□□□□□ -1.07
NSMCE1-203ENST00000562039 CGB2Q6NT52 195 aa8.36□□□□□ -1.07
NSMCE1-203ENST00000562039 DLEU7Q6UYE1 221 aa8.36□□□□□ -1.07
NSMCE1-203ENST00000562039 Q6ZT83 130 aa8.36□□□□□ -1.07
NSMCE1-203ENST00000562039 ZNF433Q8N7K0 673 aaPredicted RBP8.36□□□□□ -1.07
NSMCE1-203ENST00000562039 VANGL1Q8TAA9 524 aaPredicted RBP8.36□□□□□ -1.07
NSMCE1-203ENST00000562039 PIGXQ8TBF5 258 aa8.36□□□□□ -1.07
NSMCE1-203ENST00000562039 OIT3Q8WWZ8 545 aa8.36□□□□□ -1.07
NSMCE1-203ENST00000562039 MBD6Q96DN6 1003 aa8.36□□□□□ -1.07
NSMCE1-203ENST00000562039 KTI12Q96EK9 354 aaPredicted RBP8.36□□□□□ -1.07
NSMCE1-203ENST00000562039 ALPK1Q96QP1 1244 aa8.36□□□□□ -1.07
NSMCE1-203ENST00000562039 TMUB1Q9BVT8 246 aa8.36□□□□□ -1.07
NSMCE1-203ENST00000562039 TAPBPLQ9BX59 468 aa8.36□□□□□ -1.07
NSMCE1-203ENST00000562039 ZNF385DQ9H6B1 395 aa8.36□□□□□ -1.07
NSMCE1-203ENST00000562039 SLC7A10Q9NS82 523 aa8.36□□□□□ -1.07
NSMCE1-203ENST00000562039 FGFR1OP2Q9NVK5 253 aa8.36□□□□□ -1.07
NSMCE1-203ENST00000562039 NPAP1Q9NZP6 1156 aa8.36□□□□□ -1.07
NSMCE1-203ENST00000562039 EMC3Q9P0I2 261 aa8.36□□□□□ -1.07
NSMCE1-203ENST00000562039 UPB1Q9UBR1 384 aa8.36□□□□□ -1.07
NSMCE1-203ENST00000562039 LEF1Q9UJU2 399 aaPredicted RBP8.36□□□□□ -1.07
NSMCE1-203ENST00000562039 USP22Q9UPT9 525 aa8.36□□□□□ -1.07
NSMCE1-203ENST00000562039 LAMP3Q9UQV4 416 aa8.36□□□□□ -1.07
NSMCE1-203ENST00000562039 IFT52Q9Y366 437 aa8.36□□□□□ -1.07
NSMCE1-203ENST00000562039 NDUFAF1Q9Y375 327 aa8.36□□□□□ -1.07
NSMCE1-203ENST00000562039 FLVCR1Q9Y5Y0 555 aa8.36□□□□□ -1.07
NSMCE1-203ENST00000562039 C2CD3Q4AC94 2353 aa8.36□□□□□ -1.07
NSMCE1-203ENST00000562039 VPS13CQ709C8 3753 aa8.35□□□□□ -1.07
NSMCE1-203ENST00000562039 IGKV3D-15A0A087WSY6 115 aa8.35□□□□□ -1.07
NSMCE1-203ENST00000562039 A0A1B0GWA3 101 aa8.35□□□□□ -1.07
NSMCE1-203ENST00000562039 TRIM64A6NGJ6 449 aa8.35□□□□□ -1.07
NSMCE1-203ENST00000562039 TRIM64BA6NI03 449 aa8.35□□□□□ -1.07
NSMCE1-203ENST00000562039 ELOA3DA6NLF2 546 aaPredicted RBP8.35□□□□□ -1.07
NSMCE1-203ENST00000562039 M0R1B8 84 aa8.35□□□□□ -1.07
NSMCE1-203ENST00000562039 M0R3H8 397 aa8.35□□□□□ -1.07
NSMCE1-203ENST00000562039 FAAHO00519 579 aa8.35□□□□□ -1.07
NSMCE1-203ENST00000562039 ZNF208O43345 1280 aa8.35□□□□□ -1.07
NSMCE1-203ENST00000562039 GOSR1O95249 250 aa8.35□□□□□ -1.07
NSMCE1-203ENST00000562039 AHSA1O95433 338 aa8.35□□□□□ -1.07
NSMCE1-203ENST00000562039 GPIP06744 558 aa8.35□□□□□ -1.07
NSMCE1-203ENST00000562039 CD3EP07766 207 aa8.35□□□□□ -1.07
NSMCE1-203ENST00000562039 BMP2P12643 396 aa8.35□□□□□ -1.07
NSMCE1-203ENST00000562039 GGT1P19440 569 aa8.35□□□□□ -1.07
NSMCE1-203ENST00000562039 SLC6A2P23975 617 aa8.35□□□□□ -1.07
NSMCE1-203ENST00000562039 PCYT1AP49585 367 aa8.35□□□□□ -1.07
NSMCE1-203ENST00000562039 CLK1P49759 484 aaKnown RBP8.35□□□□□ -1.07
NSMCE1-203ENST00000562039 ARFIP2P53365 341 aa8.35□□□□□ -1.07
NSMCE1-203ENST00000562039 GUCY1A3Q02108 690 aa8.35□□□□□ -1.07
NSMCE1-203ENST00000562039 BSPH1Q075Z2 132 aa8.35□□□□□ -1.07
NSMCE1-203ENST00000562039 DMTNQ08495 405 aa8.35□□□□□ -1.07
NSMCE1-203ENST00000562039 SPOCK1Q08629 439 aa8.35□□□□□ -1.07
NSMCE1-203ENST00000562039 PPA1Q15181 289 aa8.35□□□□□ -1.07
NSMCE1-203ENST00000562039 CYP51A1Q16850 503 aa8.35□□□□□ -1.07
NSMCE1-203ENST00000562039 ELOA3BQ3SY89 546 aa8.35□□□□□ -1.07
NSMCE1-203ENST00000562039 NCMAPQ5T1S8 102 aa8.35□□□□□ -1.07
NSMCE1-203ENST00000562039 PRAMEF8Q5VWM4 474 aa8.35□□□□□ -1.07
NSMCE1-203ENST00000562039 PRAMEF7Q5VXH5 474 aa8.35□□□□□ -1.07
NSMCE1-203ENST00000562039 FBXW9Q5XUX1 488 aa8.35□□□□□ -1.07
NSMCE1-203ENST00000562039 TMEM225Q6GV28 225 aa8.35□□□□□ -1.07
NSMCE1-203ENST00000562039 REEP3Q6NUK4 255 aa8.35□□□□□ -1.07
NSMCE1-203ENST00000562039 AAED1Q7RTV5 226 aa8.35□□□□□ -1.07
NSMCE1-203ENST00000562039 PTOV1Q86YD1 416 aa8.35□□□□□ -1.07
NSMCE1-203ENST00000562039 PIAS4Q8N2W9 510 aaPredicted RBP8.35□□□□□ -1.07
NSMCE1-203ENST00000562039 CIARTQ8N365 385 aaPredicted RBP8.35□□□□□ -1.07
NSMCE1-203ENST00000562039 ELOA3Q8NG57 546 aa8.35□□□□□ -1.07
NSMCE1-203ENST00000562039 OR9K2Q8NGE7 335 aa8.35□□□□□ -1.07
NSMCE1-203ENST00000562039 LILRB1Q8NHL6 650 aaPredicted RBP8.35□□□□□ -1.07
NSMCE1-203ENST00000562039 HSD17B8Q92506 261 aa8.35□□□□□ -1.07
NSMCE1-203ENST00000562039 PMM1Q92871 262 aa8.35□□□□□ -1.07
NSMCE1-203ENST00000562039 Q96MF0 132 aa8.35□□□□□ -1.07
NSMCE1-203ENST00000562039 HDHD5Q9BXW7 423 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms