RNA–Protein interactions for RNA: ENST00000561673.1

CLK3-205, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 639 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-205ENST00000561673 HOXB9P17482 250 aaPredicted RBP9.07□□□□□ -0.96
CLK3-205ENST00000561673 CXCR1P25024 350 aa9.07□□□□□ -0.96
CLK3-205ENST00000561673 MRPL19P49406 292 aaKnown RBP9.07□□□□□ -0.96
CLK3-205ENST00000561673 IDH3AP50213 366 aa9.07□□□□□ -0.96
CLK3-205ENST00000561673 LTBQ06643 244 aa9.07□□□□□ -0.96
CLK3-205ENST00000561673 SLC17A1Q14916 467 aa9.07□□□□□ -0.96
CLK3-205ENST00000561673 LARS2Q15031 903 aaKnown RBP9.07□□□□□ -0.96
CLK3-205ENST00000561673 RGNQ15493 299 aa9.07□□□□□ -0.96
CLK3-205ENST00000561673 KRTAP21-3Q3LHN1 58 aa9.07□□□□□ -0.96
CLK3-205ENST00000561673 SLC2A7Q6PXP3 512 aa9.07□□□□□ -0.96
CLK3-205ENST00000561673 PAQR6Q6TCH4 344 aa9.07□□□□□ -0.96
CLK3-205ENST00000561673 RETREG3Q86VR2 466 aa9.07□□□□□ -0.96
CLK3-205ENST00000561673 P2RY8Q86VZ1 359 aa9.07□□□□□ -0.96
CLK3-205ENST00000561673 FUNDC1Q8IVP5 155 aa9.07□□□□□ -0.96
CLK3-205ENST00000561673 LRRC8CQ8TDW0 803 aa9.07□□□□□ -0.96
CLK3-205ENST00000561673 SMAP2Q8WU79 429 aaPredicted RBP9.07□□□□□ -0.96
CLK3-205ENST00000561673 MAL2Q969L2 176 aa9.07□□□□□ -0.96
CLK3-205ENST00000561673 FBXW5Q969U6 566 aa9.07□□□□□ -0.96
CLK3-205ENST00000561673 APH1AQ96BI3 265 aa9.07□□□□□ -0.96
CLK3-205ENST00000561673 COX4I2Q96KJ9 171 aa9.07□□□□□ -0.96
CLK3-205ENST00000561673 EBF4Q9BQW3 602 aa9.07□□□□□ -0.96
CLK3-205ENST00000561673 NAA11Q9BSU3 229 aaPredicted RBP9.07□□□□□ -0.96
CLK3-205ENST00000561673 BDH2Q9BUT1 245 aa9.07□□□□□ -0.96
CLK3-205ENST00000561673 TRIM2Q9C040 744 aa9.07□□□□□ -0.96
CLK3-205ENST00000561673 TCF7L2Q9NQB0 619 aa9.07□□□□□ -0.96
CLK3-205ENST00000561673 ASB6Q9NWX5 421 aa9.07□□□□□ -0.96
CLK3-205ENST00000561673 NPAP1Q9NZP6 1156 aa9.07□□□□□ -0.96
CLK3-205ENST00000561673 PRDM4Q9UKN5 801 aa9.07□□□□□ -0.96
CLK3-205ENST00000561673 ZNF232Q9UNY5 417 aa9.07□□□□□ -0.96
CLK3-205ENST00000561673 FREM1Q5H8C1 2179 aa9.07□□□□□ -0.96
CLK3-205ENST00000561673 A0A096LPI6 279 aa9.06□□□□□ -0.96
CLK3-205ENST00000561673 CIB4A0PJX0 185 aa9.06□□□□□ -0.96
CLK3-205ENST00000561673 TMEM247A6NEH6 219 aa9.06□□□□□ -0.96
CLK3-205ENST00000561673 LIPT2A6NK58 231 aa9.06□□□□□ -0.96
CLK3-205ENST00000561673 CCT8L1PA6NM43 557 aa9.06□□□□□ -0.96
CLK3-205ENST00000561673 OVOL3O00110 214 aa9.06□□□□□ -0.96
CLK3-205ENST00000561673 SMAD7O15105 426 aaKnown RBP9.06□□□□□ -0.96
CLK3-205ENST00000561673 POLR3GO15318 223 aaPredicted RBP9.06□□□□□ -0.96
CLK3-205ENST00000561673 RAD51DO75771 328 aa9.06□□□□□ -0.96
CLK3-205ENST00000561673 AKR7A3O95154 331 aa9.06□□□□□ -0.96
CLK3-205ENST00000561673 LY6G6DO95868 133 aa9.06□□□□□ -0.96
CLK3-205ENST00000561673 THBS1P07996 1170 aa9.06□□□□□ -0.96
CLK3-205ENST00000561673 DANCRP0C864 163 aa9.06□□□□□ -0.96
CLK3-205ENST00000561673 FOXG1P55316 489 aaPredicted RBP9.06□□□□□ -0.96
CLK3-205ENST00000561673 ATP5J2P56134 94 aa9.06□□□□□ -0.96
CLK3-205ENST00000561673 COPZ1P61923 177 aa9.06□□□□□ -0.96
CLK3-205ENST00000561673 RPS4XP62701 263 aaKnown RBP9.06□□□□□ -0.96
CLK3-205ENST00000561673 FAPQ12884 760 aa9.06□□□□□ -0.96
CLK3-205ENST00000561673 BNIP2Q12982 314 aa9.06□□□□□ -0.96
CLK3-205ENST00000561673 CEACAM7Q14002 265 aa9.06□□□□□ -0.96
CLK3-205ENST00000561673 OR7A5Q15622 319 aa9.06□□□□□ -0.96
CLK3-205ENST00000561673 ZSWIM7Q19AV6 140 aa9.06□□□□□ -0.96
CLK3-205ENST00000561673 PGGHGQ32M88 737 aa9.06□□□□□ -0.96
CLK3-205ENST00000561673 TTMPQ5BVD1 217 aa9.06□□□□□ -0.96
CLK3-205ENST00000561673 RNF220Q5VTB9 566 aa9.06□□□□□ -0.96
CLK3-205ENST00000561673 WBP2NLQ6ICG8 309 aa9.06□□□□□ -0.96
CLK3-205ENST00000561673 BLOC1S3Q6QNY0 202 aa9.06□□□□□ -0.96
CLK3-205ENST00000561673 SERPINA11Q86U17 422 aa9.06□□□□□ -0.96
CLK3-205ENST00000561673 MSRB3Q8IXL7 192 aa9.06□□□□□ -0.96
CLK3-205ENST00000561673 CADM2Q8N3J6 435 aa9.06□□□□□ -0.96
CLK3-205ENST00000561673 TMEM99Q8N816 258 aa9.06□□□□□ -0.96
CLK3-205ENST00000561673 KBTBD8Q8NFY9 601 aa9.06□□□□□ -0.96
CLK3-205ENST00000561673 OR52E4Q8NGH9 312 aa9.06□□□□□ -0.96
CLK3-205ENST00000561673 OR52N5Q8NH56 324 aa9.06□□□□□ -0.96
CLK3-205ENST00000561673 ATP6V1G3Q96LB4 118 aa9.06□□□□□ -0.96
CLK3-205ENST00000561673 MUS81Q96NY9 551 aa9.06□□□□□ -0.96
CLK3-205ENST00000561673 SPATA9Q9BWV2 254 aa9.06□□□□□ -0.96
CLK3-205ENST00000561673 BCL2L10Q9HD36 194 aa9.06□□□□□ -0.96
CLK3-205ENST00000561673 A4GALTQ9NPC4 353 aa9.06□□□□□ -0.96
CLK3-205ENST00000561673 SLC52A3Q9NQ40 469 aa9.06□□□□□ -0.96
CLK3-205ENST00000561673 PARPBPQ9NWS1 579 aa9.06□□□□□ -0.96
CLK3-205ENST00000561673 SLC25A37Q9NYZ2 338 aa9.06□□□□□ -0.96
CLK3-205ENST00000561673 SLAMF8Q9P0V8 285 aa9.06□□□□□ -0.96
CLK3-205ENST00000561673 MALT1Q9UDY8 824 aa9.06□□□□□ -0.96
CLK3-205ENST00000561673 IFT52Q9Y366 437 aa9.06□□□□□ -0.96
CLK3-205ENST00000561673 MAGED1Q9Y5V3 778 aaPredicted RBP9.06□□□□□ -0.96
CLK3-205ENST00000561673 FLVCR1Q9Y5Y0 555 aa9.06□□□□□ -0.96
CLK3-205ENST00000561673 DSCAMO60469 2012 aa9.05□□□□□ -0.96
CLK3-205ENST00000561673 ARID1AO14497 2285 aa9.05□□□□□ -0.96
CLK3-205ENST00000561673 A0A1W2PR80 420 aa9.05□□□□□ -0.96
CLK3-205ENST00000561673 A8MVM7 634 aa9.05□□□□□ -0.96
CLK3-205ENST00000561673 FAM171A2A8MVW0 826 aa9.05□□□□□ -0.96
CLK3-205ENST00000561673 SHISA9B4DS77 424 aa9.05□□□□□ -0.96
CLK3-205ENST00000561673 PDLIM1O00151 329 aa9.05□□□□□ -0.96
CLK3-205ENST00000561673 ABCD4O14678 606 aa9.05□□□□□ -0.96
CLK3-205ENST00000561673 CD8AP01732 235 aa9.05□□□□□ -0.96
CLK3-205ENST00000561673 GPIP06744 558 aa9.05□□□□□ -0.96
CLK3-205ENST00000561673 HEXAP06865 529 aa9.05□□□□□ -0.96
CLK3-205ENST00000561673 ITGA5P08648 1049 aa9.05□□□□□ -0.96
CLK3-205ENST00000561673 BMP2P12643 396 aa9.05□□□□□ -0.96
CLK3-205ENST00000561673 NCF2P19878 526 aaPredicted RBP9.05□□□□□ -0.96
CLK3-205ENST00000561673 IDUAP35475 653 aa9.05□□□□□ -0.96
CLK3-205ENST00000561673 AQP5P55064 265 aa9.05□□□□□ -0.96
CLK3-205ENST00000561673 STX1BP61266 288 aa9.05□□□□□ -0.96
CLK3-205ENST00000561673 HOXC5Q00444 222 aa9.05□□□□□ -0.96
CLK3-205ENST00000561673 FADDQ13158 208 aa9.05□□□□□ -0.96
CLK3-205ENST00000561673 GABRA6Q16445 453 aa9.05□□□□□ -0.96
CLK3-205ENST00000561673 ZNF311Q5JNZ3 666 aa9.05□□□□□ -0.96
CLK3-205ENST00000561673 PAGE3Q5JUK9 113 aa9.05□□□□□ -0.96
CLK3-205ENST00000561673 OTUD3Q5T2D3 398 aaPredicted RBP9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms